| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527558
Identifier: 188527558
GI number: 188527558
Start: 763376
End: 763540
Strand: Reverse
Name: 188527558
Synonym: HPSH_03900
Alternate gene names: NA
Gene position: 763540-763376 (Counterclockwise)
Preceding gene: 188527559
Following gene: 188527557
Centisome position: 47.47
GC content: 38.18
Gene sequence:
>165_bases ATGGAGTTTTTAGGACTGCTTTTAAGTCTAGCCGCTGTCTTGATAGCGTTTAAAAAGCCTGAAAAAGAAAATTGGGCGTT TGGGATTTTGATTGTGGTGTGGTTGGTGGAGCTTATTATTTTTATAGCCCACAGCTCTAGCGTTTTGCCTAATATGAATT TATAG
Upstream 100 bases:
>100_bases TTCTCCCTTAAAATTCTCTCAAAAGTTATCCACTAGATATTTTTTATTTATCCAATAGTTTGTTTTTGAGTATAATCCTA CGAAAATTTTAAGGAATGGC
Downstream 100 bases:
>100_bases GGGGATGCATGAATAAAGAAACCCGATTTTATAATCTTTTTTCCTTGGCGATTTTAGGGATTTTAATCTTTCCTGTGGGT TTGGCGAATTTTTATTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MEFLGLLLSLAAVLIAFKKPEKENWAFGILIVVWLVELIIFIAHSSSVLPNMNL
Sequences:
>Translated_54_residues MEFLGLLLSLAAVLIAFKKPEKENWAFGILIVVWLVELIIFIAHSSSVLPNMNL >Mature_54_residues MEFLGLLLSLAAVLIAFKKPEKENWAFGILIVVWLVELIIFIAHSSSVLPNMNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6053; Mature: 6053
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLGLLLSLAAVLIAFKKPEKENWAFGILIVVWLVELIIFIAHSSSVLPNMNL CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MEFLGLLLSLAAVLIAFKKPEKENWAFGILIVVWLVELIIFIAHSSSVLPNMNL CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA