Click here to switch to the map view.

The map label for this gene is 188527449

Identifier: 188527449

GI number: 188527449

Start: 633606

End: 634427

Strand: Reverse

Name: 188527449

Synonym: HPSH_03335

Alternate gene names: NA

Gene position: 634427-633606 (Counterclockwise)

Preceding gene: 188527450

Following gene: 188527447

Centisome position: 39.44

GC content: 35.89

Gene sequence:

>822_bases
ATGTTAGCGAATGATTTTATCGTTAAGAAATTAAAAAACAAGGAGTTGCATGGTTTGTTGTGTAACAAATTGAGTAAAAG
AGTGGATAGATTTGGCTATAGAGCGATTGGTGTTGGAGTGGATAAAGAGACTAACAGAGTTATTGTTCAATTGAATAAGG
AAACGATTGTTAGATTGAATAGCAAAACCGCTTTAGCAAATGGTGATAATTTCATGGAGAATATTTTTGATGAATTTAAT
GGATTAAAGGCTAATAAAGAACCACAGAAACCTAACTCGTTCTATTATGGGCATGGTAGCTCTTATAAAATCATTGATAT
TCTTAACGATAAGGATGGTGATTTTATCAATTGCAAATTGTTTATCGTTAAGGAATTAGAGGTTGATGAGTGTTTAGGAT
TTTATGCGCCCCCTATGATTGATAATAACAACACCACTCTTGCTGATTTGCTTGAAAATGGCGAGCCTGCAATATATTAT
GAAGCTAATTCTGCAAATATCAGGCGTTTTTTGGATAGAGGACCTTACGACATTGAGTGGTTGATGAGGAAGTATTTGGA
GGTTGGGTTTAGGAGTTTCAAGGTAGAGCGGATACGAGAAACAAAATTCGTGATCAAATTCCGCTATAAAAAGTGGGGAT
CTATGATTGATAGAGAAGTTAAAATGCAATTCCCCAAATATCTTAAAGACTCAAAGAGGGAAGCCGTTAAAATAACAAGC
AGGGTGTTTTATGAGTTGTCAAAAGGGCCCCTGTTTGGCAACCTCCTCGGCAAAGATCCCATTCAGGCGATTCTAATGCG
GAAGGGAAACAATAATAAATAA

Upstream 100 bases:

>100_bases
ATTTCATGGAGTTATTAAAAATCATTTATTAGAAACGCTTAATTTGGGATTTTTGCTTAAAGGGATTTAAAGATGAGGGT
TCAATTAATGGGGAGTTTTT

Downstream 100 bases:

>100_bases
AATCTTGTTGGGTCTTAATCTTCTTATTTTTTAAATTAAAAGCCATTTTTTAACCCCTAAAACCGCACTACAAAAATTAT
CATGCCATTAAAATCAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLANDFIVKKLKNKELHGLLCNKLSKRVDRFGYRAIGVGVDKETNRVIVQLNKETIVRLNSKTALANGDNFMENIFDEFN
GLKANKEPQKPNSFYYGHGSSYKIIDILNDKDGDFINCKLFIVKELEVDECLGFYAPPMIDNNNTTLADLLENGEPAIYY
EANSANIRRFLDRGPYDIEWLMRKYLEVGFRSFKVERIRETKFVIKFRYKKWGSMIDREVKMQFPKYLKDSKREAVKITS
RVFYELSKGPLFGNLLGKDPIQAILMRKGNNNK

Sequences:

>Translated_273_residues
MLANDFIVKKLKNKELHGLLCNKLSKRVDRFGYRAIGVGVDKETNRVIVQLNKETIVRLNSKTALANGDNFMENIFDEFN
GLKANKEPQKPNSFYYGHGSSYKIIDILNDKDGDFINCKLFIVKELEVDECLGFYAPPMIDNNNTTLADLLENGEPAIYY
EANSANIRRFLDRGPYDIEWLMRKYLEVGFRSFKVERIRETKFVIKFRYKKWGSMIDREVKMQFPKYLKDSKREAVKITS
RVFYELSKGPLFGNLLGKDPIQAILMRKGNNNK
>Mature_273_residues
MLANDFIVKKLKNKELHGLLCNKLSKRVDRFGYRAIGVGVDKETNRVIVQLNKETIVRLNSKTALANGDNFMENIFDEFN
GLKANKEPQKPNSFYYGHGSSYKIIDILNDKDGDFINCKLFIVKELEVDECLGFYAPPMIDNNNTTLADLLENGEPAIYY
EANSANIRRFLDRGPYDIEWLMRKYLEVGFRSFKVERIRETKFVIKFRYKKWGSMIDREVKMQFPKYLKDSKREAVKITS
RVFYELSKGPLFGNLLGKDPIQAILMRKGNNNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31754; Mature: 31754

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLANDFIVKKLKNKELHGLLCNKLSKRVDRFGYRAIGVGVDKETNRVIVQLNKETIVRLN
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCEEEEC
SKTALANGDNFMENIFDEFNGLKANKEPQKPNSFYYGHGSSYKIIDILNDKDGDFINCKL
CCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEEE
FIVKELEVDECLGFYAPPMIDNNNTTLADLLENGEPAIYYEANSANIRRFLDRGPYDIEW
EEEEECCHHHHHCCCCCCEECCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCHHH
LMRKYLEVGFRSFKVERIRETKFVIKFRYKKWGSMIDREVKMQFPKYLKDSKREAVKITS
HHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVFYELSKGPLFGNLLGKDPIQAILMRKGNNNK
HHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MLANDFIVKKLKNKELHGLLCNKLSKRVDRFGYRAIGVGVDKETNRVIVQLNKETIVRLN
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCEEEEC
SKTALANGDNFMENIFDEFNGLKANKEPQKPNSFYYGHGSSYKIIDILNDKDGDFINCKL
CCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEEE
FIVKELEVDECLGFYAPPMIDNNNTTLADLLENGEPAIYYEANSANIRRFLDRGPYDIEW
EEEEECCHHHHHCCCCCCEECCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCHHH
LMRKYLEVGFRSFKVERIRETKFVIKFRYKKWGSMIDREVKMQFPKYLKDSKREAVKITS
HHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVFYELSKGPLFGNLLGKDPIQAILMRKGNNNK
HHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA