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The map label for this gene is 188527447

Identifier: 188527447

GI number: 188527447

Start: 629598

End: 630410

Strand: Reverse

Name: 188527447

Synonym: HPSH_03325

Alternate gene names: NA

Gene position: 630410-629598 (Counterclockwise)

Preceding gene: 188527449

Following gene: 188527446

Centisome position: 39.19

GC content: 41.45

Gene sequence:

>813_bases
ATGAAAAAGTTTGTAGCTTTAGGGCTTCTATCCGCAGTTTTAAGCTCTTCGTTGTTAGCCGAAGGTGATGGTGTTTATAT
AGGGACTAATTATCAGCTTGGACAAGCCCGTTTGAATAGTAATATTTATAATACAGGGGATTGCACAGGGAGTGTTGTAG
GTTGCCCCCCAGGTCTTACCGCTAATAAGCATAATCCAGGAGGCACCAATATCAATTGGCATGCCAAATACGCTAATGGG
GCTTTGAATGGTTTTGGGTTGAATGTGGGTTATAAGAAATTTTTCCAGTTCAAGTCGTTGGATATGACAAGCAAGTGGTT
TGGTTTTAGGGTGTATGGGCTTTTTGATTATGGGCATGCTGATTTAGGTAAGCAAGTTTATGCACCTAATAAAATCCAGT
TGGATATGGTTTCTTGGGGTGTGGGGAGCGATTTGTTAGCTGATATTATTGATAAAGACAACGCTTCTTTTGGTATTTTT
GGTGGGGTCGCTATCGGCGGTAACACTTGGAAAAGCTCAGCAGCAAACTATTGGAAAGAGCAAATCATTGAAGCTAAAGG
TCCTGATGTTTGCACCCCTACTTATTGTAACCCTAACGCTCCTTATAGCACCAACACTTCAACCGTCGCTTTTCAGGTAT
GGTTGAATTTTGGGGTGAGAGCCAATATCTACAAGCATAATGGCGTGGAGTTTGGCGTGAGAGTGCCGCTACTCATCAAC
AAGTTTTTGAGCGCGGGTCCTAACGCTACTAATCTTTATTACCATTTGAAACGGGATTATTCGCTTTATTTAGGGTATAA
CTACACTTTTTAA

Upstream 100 bases:

>100_bases
TCTTATTCATAAGAGTTAAAAATATTTGCTTGATTAAGGATAAACATGCTATTATTTTATGAGACAATTTTAAAGATAGG
AATGTAAAGGAATGGAATTT

Downstream 100 bases:

>100_bases
ACCCTTTTTAAAAGGGTATCTTTAAGCCCTTTTTAGTCTTTATAAAAGGGATTTTAATTTGGGTTTTTGCATCTTAAAAA
GCTAAGATTGAAAGCTGAGG

Product: Outer membrane protein/porin

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HorA; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HorB; Outer Membrane Protein HopG; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopD; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKKFVALGLLSAVLSSSLLAEGDGVYIGTNYQLGQARLNSNIYNTGDCTGSVVGCPPGLTANKHNPGGTNINWHAKYANG
ALNGFGLNVGYKKFFQFKSLDMTSKWFGFRVYGLFDYGHADLGKQVYAPNKIQLDMVSWGVGSDLLADIIDKDNASFGIF
GGVAIGGNTWKSSAANYWKEQIIEAKGPDVCTPTYCNPNAPYSTNTSTVAFQVWLNFGVRANIYKHNGVEFGVRVPLLIN
KFLSAGPNATNLYYHLKRDYSLYLGYNYTF

Sequences:

>Translated_270_residues
MKKFVALGLLSAVLSSSLLAEGDGVYIGTNYQLGQARLNSNIYNTGDCTGSVVGCPPGLTANKHNPGGTNINWHAKYANG
ALNGFGLNVGYKKFFQFKSLDMTSKWFGFRVYGLFDYGHADLGKQVYAPNKIQLDMVSWGVGSDLLADIIDKDNASFGIF
GGVAIGGNTWKSSAANYWKEQIIEAKGPDVCTPTYCNPNAPYSTNTSTVAFQVWLNFGVRANIYKHNGVEFGVRVPLLIN
KFLSAGPNATNLYYHLKRDYSLYLGYNYTF
>Mature_270_residues
MKKFVALGLLSAVLSSSLLAEGDGVYIGTNYQLGQARLNSNIYNTGDCTGSVVGCPPGLTANKHNPGGTNINWHAKYANG
ALNGFGLNVGYKKFFQFKSLDMTSKWFGFRVYGLFDYGHADLGKQVYAPNKIQLDMVSWGVGSDLLADIIDKDNASFGIF
GGVAIGGNTWKSSAANYWKEQIIEAKGPDVCTPTYCNPNAPYSTNTSTVAFQVWLNFGVRANIYKHNGVEFGVRVPLLIN
KFLSAGPNATNLYYHLKRDYSLYLGYNYTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29536; Mature: 29536

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFVALGLLSAVLSSSLLAEGDGVYIGTNYQLGQARLNSNIYNTGDCTGSVVGCPPGLT
CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECHHHHCCCCEECCCCCCEEEECCCCCC
ANKHNPGGTNINWHAKYANGALNGFGLNVGYKKFFQFKSLDMTSKWFGFRVYGLFDYGHA
CCCCCCCCCCEEEEEEECCCCCCCEEECCCHHHHHEECCCCCCCCCCCEEEEEEEECCCC
DLGKQVYAPNKIQLDMVSWGVGSDLLADIIDKDNASFGIFGGVAIGGNTWKSSAANYWKE
CCCCEECCCCEEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHH
QIIEAKGPDVCTPTYCNPNAPYSTNTSTVAFQVWLNFGVRANIYKHNGVEFGVRVPLLIN
HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEECCCEEEEEEHHHHHH
KFLSAGPNATNLYYHLKRDYSLYLGYNYTF
HHHHCCCCCCEEEEEEECCEEEEEEEEECC
>Mature Secondary Structure
MKKFVALGLLSAVLSSSLLAEGDGVYIGTNYQLGQARLNSNIYNTGDCTGSVVGCPPGLT
CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECHHHHCCCCEECCCCCCEEEECCCCCC
ANKHNPGGTNINWHAKYANGALNGFGLNVGYKKFFQFKSLDMTSKWFGFRVYGLFDYGHA
CCCCCCCCCCEEEEEEECCCCCCCEEECCCHHHHHEECCCCCCCCCCCEEEEEEEECCCC
DLGKQVYAPNKIQLDMVSWGVGSDLLADIIDKDNASFGIFGGVAIGGNTWKSSAANYWKE
CCCCEECCCCEEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHH
QIIEAKGPDVCTPTYCNPNAPYSTNTSTVAFQVWLNFGVRANIYKHNGVEFGVRVPLLIN
HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEECCCEEEEEEHHHHHH
KFLSAGPNATNLYYHLKRDYSLYLGYNYTF
HHHHCCCCCCEEEEEEECCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA