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The map label for this gene is 188527191

Identifier: 188527191

GI number: 188527191

Start: 380783

End: 381385

Strand: Direct

Name: 188527191

Synonym: HPSH_01990

Alternate gene names: NA

Gene position: 380783-381385 (Clockwise)

Preceding gene: 188527184

Following gene: 188527200

Centisome position: 23.67

GC content: 36.15

Gene sequence:

>603_bases
GTGTATTATTTAAGAATTTTAATACTGAGTATAAGTTTTTTAAATATTTTAAATGCTGAAAATTTGAGTTATATGTCTTC
TTCTTATCAAATAGGCACGGTGTTTATGCGCCCTTTAAACACCAACAAGCTTTTACAAGGGGCTTCAATCCTTCAAGGCT
ATGAAGTGAATCCTAAAAACGATTGGGCTTATTCTAGGTATTATTTCTTTATAGATTATGGTAATGTGCTTTTTAATAAT
GATTCTACTTTGCAAGCGAACATGTTCACTTATGGGGTGGGAGGGGATTTTATGGTCGCCTACGCTAAAAACCCTATCAA
CCGCTGGGCTTTTTTCTTTGGCTTGCAACTGGCCGCTAACACATGGATACTCAACAATAAAGTCAAAGATTTGGTGGTGA
ATACTTGGGATTCATTAAAAGATTTCAATTTTCGTAACACTTATTTCAGGGCTATCGGGAAATTTGGGGTGCAGTTTCGC
ACGATCGTTTTGTATCATAAGGTGGATGTAGAAATTGGCATGAAAATCTTTCTAACCCCTGAAAGGCGCAGCTTGTTTGA
AAGGAGCTTTTTGTTTTTTGTTTCGCATTCGTGGCATTTTTAA

Upstream 100 bases:

>100_bases
TGCTATGATAATCGTTTAAAAGTAATAAAATAACTCTTTGAGTGCAATAAAGGGTCATTGGATGGTTTGAAAAAAAGAAA
GACAAGGATTTTACAAGTAA

Downstream 100 bases:

>100_bases
ATGGCGGAGAGAGAGGGATTCGAACCCTCGAAGGCTTGCACCTTACACGCGTTCCAGGCGTGCTCCTTCAACCACTCGGA
CATCTCCCCTTAAAAAGGGT

Product: outer membrane protein HorD

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Protein HopB

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MYYLRILILSISFLNILNAENLSYMSSSYQIGTVFMRPLNTNKLLQGASILQGYEVNPKNDWAYSRYYFFIDYGNVLFNN
DSTLQANMFTYGVGGDFMVAYAKNPINRWAFFFGLQLAANTWILNNKVKDLVVNTWDSLKDFNFRNTYFRAIGKFGVQFR
TIVLYHKVDVEIGMKIFLTPERRSLFERSFLFFVSHSWHF

Sequences:

>Translated_200_residues
MYYLRILILSISFLNILNAENLSYMSSSYQIGTVFMRPLNTNKLLQGASILQGYEVNPKNDWAYSRYYFFIDYGNVLFNN
DSTLQANMFTYGVGGDFMVAYAKNPINRWAFFFGLQLAANTWILNNKVKDLVVNTWDSLKDFNFRNTYFRAIGKFGVQFR
TIVLYHKVDVEIGMKIFLTPERRSLFERSFLFFVSHSWHF
>Mature_200_residues
MYYLRILILSISFLNILNAENLSYMSSSYQIGTVFMRPLNTNKLLQGASILQGYEVNPKNDWAYSRYYFFIDYGNVLFNN
DSTLQANMFTYGVGGDFMVAYAKNPINRWAFFFGLQLAANTWILNNKVKDLVVNTWDSLKDFNFRNTYFRAIGKFGVQFR
TIVLYHKVDVEIGMKIFLTPERRSLFERSFLFFVSHSWHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23570; Mature: 23570

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYLRILILSISFLNILNAENLSYMSSSYQIGTVFMRPLNTNKLLQGASILQGYEVNPKN
CHHHHEEHHHHHHHHHHCCCCCHHHCCCEEEEEEEEECCCCCHHHCCCHHHCCEECCCCC
DWAYSRYYFFIDYGNVLFNNDSTLQANMFTYGVGGDFMVAYAKNPINRWAFFFGLQLAAN
CCEEEEEEEEEEECEEEECCCCEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCC
TWILNNKVKDLVVNTWDSLKDFNFRNTYFRAIGKFGVQFRTIVLYHKVDVEIGMKIFLTP
EEEECCCHHHHEEECCHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEEECEEECEEEEEEC
ERRSLFERSFLFFVSHSWHF
HHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure
MYYLRILILSISFLNILNAENLSYMSSSYQIGTVFMRPLNTNKLLQGASILQGYEVNPKN
CHHHHEEHHHHHHHHHHCCCCCHHHCCCEEEEEEEEECCCCCHHHCCCHHHCCEECCCCC
DWAYSRYYFFIDYGNVLFNNDSTLQANMFTYGVGGDFMVAYAKNPINRWAFFFGLQLAAN
CCEEEEEEEEEEECEEEECCCCEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCC
TWILNNKVKDLVVNTWDSLKDFNFRNTYFRAIGKFGVQFRTIVLYHKVDVEIGMKIFLTP
EEEECCCHHHHEEECCHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEEECEEECEEEEEEC
ERRSLFERSFLFFVSHSWHF
HHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA