| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527184
Identifier: 188527184
GI number: 188527184
Start: 373334
End: 373462
Strand: Direct
Name: 188527184
Synonym: HPSH_01955
Alternate gene names: NA
Gene position: 373334-373462 (Clockwise)
Preceding gene: 188527183
Following gene: 188527191
Centisome position: 23.21
GC content: 31.01
Gene sequence:
>129_bases ATGAATGAAAAACAATTTGACCAACTAAACGCCGATATTTATACCCTTGTGTCCAATGTGGCAGTGATAGATAAAAGGTT AAAAAAGCTAGAACAAGAATTAGCACAGCTAAAAAAAGCTAAAAAATAA
Upstream 100 bases:
>100_bases GTTAGCTAATGGTTAGCAACTTGTAGATAATTTCAAGGCGATGGAAAAAGAAATTAAAGAAATAACAAAAATGATAATTA CAACAGGCAAAGCAGTTAAA
Downstream 100 bases:
>100_bases GCAAAAAGATGATGACTCTCGTATTCTTGTCCCTATTGGATACATAAAAGGCTTATGCTTGGCGATATGAAACCTGATTG ATCTATGCGTATTGTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MNEKQFDQLNADIYTLVSNVAVIDKRLKKLEQELAQLKKAKK
Sequences:
>Translated_42_residues MNEKQFDQLNADIYTLVSNVAVIDKRLKKLEQELAQLKKAKK >Mature_42_residues MNEKQFDQLNADIYTLVSNVAVIDKRLKKLEQELAQLKKAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4904; Mature: 4904
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKQFDQLNADIYTLVSNVAVIDKRLKKLEQELAQLKKAKK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNEKQFDQLNADIYTLVSNVAVIDKRLKKLEQELAQLKKAKK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA