Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927558
Identifier: 187927558
GI number: 187927558
Start: 490598
End: 491809
Strand: Reverse
Name: 187927558
Synonym: Rpic_0458
Alternate gene names: NA
Gene position: 491809-490598 (Counterclockwise)
Preceding gene: 187927560
Following gene: 187927557
Centisome position: 12.47
GC content: 62.29
Gene sequence:
>1212_bases ATGAAAACGATTTTGGCCTACAAGAAACGCGCTCTCTCCATCCAGAACATCGTTGCCCTCAGCACCGTTGCGATCGCCTT GGCGGCATGCGGTGGCGGCAGTGATGGAAGCGGCAGCAGCAATACGTCGACGTCAGGGGGCTCCACAACCACAACGCCGC AACAGGATGCCGTCAGCCAATCTTCAACCGCGCTTGTCGCTCAGACCGGTGCAACTGCCGTGCCCGGAACGACCTCCACT GCACAAGCCTTCGATCTCACGGCGGATATCGGCGACACGTGGCGTCTGGTGCTGAACCAGGACGGCTCGTTCACGATCAA GGTGTTGTCGACGCAATACGGTCTGACCGACATCTCGGGCACCTATACCCAATCGACGAGCGGTAGCTTCACGACGTACA CGGGCACCAGCGCGAACGGCAGCTTCACACTCAAGCTGGACACGCGCACCCATATCATGGGCGGTAACGTTGTCCTCCGC ACGCGCAGCTCCAGCGTTGCAGGCTCGGGCTATTCCGTTCCTGCCAACACGGCCACGCTGGCCGGCGACTACTTCTATAT CGGCGCAACCCGCAATGCCAGCGATGGCGGCTCGCCGTCGTTCTTGGGCGGCACGTTCCGTGTAGCGGCCAACGGCACGG ATGTCACGTGGTGCGACAGCGGCCTGATCAACGCATCGGGCACGTGCAATGCCGTTGCAGGTTCGAGCTCGCCGAGCCAG CAGTTCGCGTTCAAGCTGGTGAAGAACACCACCGATGGCCTGACGCACGTTCAAGGGAGCGGCTCGGATCTCGGCATTCT GAGCTTCCAGGCAGGTGACCGTGGCCCGGTGCTGGTTATCGACCGCTTTGGCTACAGCCAGTCGGCGACGCCGGTCCTGC GCACCGGGGTGATCTACGCCAGCAAGCAGCAGGTGCTCGCGGGCACCGAACTCAACGGTTCGTGGACGTGTACCGACCGT GGCACAACCATCGGTACGGTGACGATCAACGGAACCACAGTGAAGACCGCAGACACCTCTGGTGTCTCCACGGCAGAAAC GCTGTACTTCAACGACATCAGCACCAACACCGGGTTGGTTGCGGTCAATGGCGCTGCGACCTCGGTCGTGAATGGCCAGG CCCCCAGCTCAGGCGTGATCCTGCTGCCGCTGTCGTCCAGCATGTTTGTTGTCGAGCGCGACGCCGCACAGTCGGTCGCC ACCTGCCGCTGA
Upstream 100 bases:
>100_bases CTATGATCAGTTTACGGCCACGGTCTTTACGACCCATTTTAGAACACCAAGACCACTTGGCACACCTTTAACCACACGTC CGTCATAGGCAACCAACCAC
Downstream 100 bases:
>100_bases TCGTTCAATAGCCATGCACGGGGTGCTGCGCATCCCGTGAGCCTCCCTCTTGAGATTGACCCTCCATGCGCCATTCATAT CGCGCCGCCGTACTGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MKTILAYKKRALSIQNIVALSTVAIALAACGGGSDGSGSSNTSTSGGSTTTTPQQDAVSQSSTALVAQTGATAVPGTTST AQAFDLTADIGDTWRLVLNQDGSFTIKVLSTQYGLTDISGTYTQSTSGSFTTYTGTSANGSFTLKLDTRTHIMGGNVVLR TRSSSVAGSGYSVPANTATLAGDYFYIGATRNASDGGSPSFLGGTFRVAANGTDVTWCDSGLINASGTCNAVAGSSSPSQ QFAFKLVKNTTDGLTHVQGSGSDLGILSFQAGDRGPVLVIDRFGYSQSATPVLRTGVIYASKQQVLAGTELNGSWTCTDR GTTIGTVTINGTTVKTADTSGVSTAETLYFNDISTNTGLVAVNGAATSVVNGQAPSSGVILLPLSSSMFVVERDAAQSVA TCR
Sequences:
>Translated_403_residues MKTILAYKKRALSIQNIVALSTVAIALAACGGGSDGSGSSNTSTSGGSTTTTPQQDAVSQSSTALVAQTGATAVPGTTST AQAFDLTADIGDTWRLVLNQDGSFTIKVLSTQYGLTDISGTYTQSTSGSFTTYTGTSANGSFTLKLDTRTHIMGGNVVLR TRSSSVAGSGYSVPANTATLAGDYFYIGATRNASDGGSPSFLGGTFRVAANGTDVTWCDSGLINASGTCNAVAGSSSPSQ QFAFKLVKNTTDGLTHVQGSGSDLGILSFQAGDRGPVLVIDRFGYSQSATPVLRTGVIYASKQQVLAGTELNGSWTCTDR GTTIGTVTINGTTVKTADTSGVSTAETLYFNDISTNTGLVAVNGAATSVVNGQAPSSGVILLPLSSSMFVVERDAAQSVA TCR >Mature_403_residues MKTILAYKKRALSIQNIVALSTVAIALAACGGGSDGSGSSNTSTSGGSTTTTPQQDAVSQSSTALVAQTGATAVPGTTST AQAFDLTADIGDTWRLVLNQDGSFTIKVLSTQYGLTDISGTYTQSTSGSFTTYTGTSANGSFTLKLDTRTHIMGGNVVLR TRSSSVAGSGYSVPANTATLAGDYFYIGATRNASDGGSPSFLGGTFRVAANGTDVTWCDSGLINASGTCNAVAGSSSPSQ QFAFKLVKNTTDGLTHVQGSGSDLGILSFQAGDRGPVLVIDRFGYSQSATPVLRTGVIYASKQQVLAGTELNGSWTCTDR GTTIGTVTINGTTVKTADTSGVSTAETLYFNDISTNTGLVAVNGAATSVVNGQAPSSGVILLPLSSSMFVVERDAAQSVA TCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40822; Mature: 40822
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTILAYKKRALSIQNIVALSTVAIALAACGGGSDGSGSSNTSTSGGSTTTTPQQDAVSQ CCCHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC SSTALVAQTGATAVPGTTSTAQAFDLTADIGDTWRLVLNQDGSFTIKVLSTQYGLTDISG CCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCEECCC TYTQSTSGSFTTYTGTSANGSFTLKLDTRTHIMGGNVVLRTRSSSVAGSGYSVPANTATL CEEECCCCCEEEEECCCCCCEEEEEECCEEEEECCCEEEEECCCCCCCCCEECCCCCEEE AGDYFYIGATRNASDGGSPSFLGGTFRVAANGTDVTWCDSGLINASGTCNAVAGSSSPSQ ECCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCHH QFAFKLVKNTTDGLTHVQGSGSDLGILSFQAGDRGPVLVIDRFGYSQSATPVLRTGVIYA HHHHHEECCCCCCEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEE SKQQVLAGTELNGSWTCTDRGTTIGTVTINGTTVKTADTSGVSTAETLYFNDISTNTGLV CCCEEEECCCCCCEEEECCCCCEEEEEEECCEEEEECCCCCCCEEEEEEEECCCCCCCEE AVNGAATSVVNGQAPSSGVILLPLSSSMFVVERDAAQSVATCR EECCCEEEEECCCCCCCCEEEEECCCCEEEEECCCHHHHHCCC >Mature Secondary Structure MKTILAYKKRALSIQNIVALSTVAIALAACGGGSDGSGSSNTSTSGGSTTTTPQQDAVSQ CCCHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC SSTALVAQTGATAVPGTTSTAQAFDLTADIGDTWRLVLNQDGSFTIKVLSTQYGLTDISG CCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCEECCC TYTQSTSGSFTTYTGTSANGSFTLKLDTRTHIMGGNVVLRTRSSSVAGSGYSVPANTATL CEEECCCCCEEEEECCCCCCEEEEEECCEEEEECCCEEEEECCCCCCCCCEECCCCCEEE AGDYFYIGATRNASDGGSPSFLGGTFRVAANGTDVTWCDSGLINASGTCNAVAGSSSPSQ ECCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCHH QFAFKLVKNTTDGLTHVQGSGSDLGILSFQAGDRGPVLVIDRFGYSQSATPVLRTGVIYA HHHHHEECCCCCCEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEE SKQQVLAGTELNGSWTCTDRGTTIGTVTINGTTVKTADTSGVSTAETLYFNDISTNTGLV CCCEEEECCCCCCEEEECCCCCEEEEEEECCEEEEECCCCCCCEEEEEEEECCCCCCCEE AVNGAATSVVNGQAPSSGVILLPLSSSMFVVERDAAQSVATCR EECCCEEEEECCCCCCCCEEEEECCCCEEEEECCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA