Click here to switch to the map view.

The map label for this gene is 187927557

Identifier: 187927557

GI number: 187927557

Start: 489855

End: 490532

Strand: Reverse

Name: 187927557

Synonym: Rpic_0457

Alternate gene names: NA

Gene position: 490532-489855 (Counterclockwise)

Preceding gene: 187927558

Following gene: 187927556

Centisome position: 12.44

GC content: 59.44

Gene sequence:

>678_bases
ATGCGCCATTCATATCGCGCCGCCGTACTGGCGGCAGCCTGCACGATGCTCACCGCCTGCGCCGGATTGCCCCAGCAAAT
GGATCAGGTTGCCGATAACCTGCGACAGCTCGGCCAGAGTGTCTCCAGCCCCTTGGTCCCGAGCGGCCCTTCCGCATTCA
GCCAGTCAGGACTGGCCAACGTATTCAAAGGAACCGACCCGGCCAGCAAATGGCCTCGCGTTGCGCTGACCATCGACAAC
ATGCCGGCAGATGCGCAGAACAATTGGTTTGAATGGCGTGCCGCTCCGGTCCCCGCAGCAAGCGTTGCGGTCGCGCCCGC
CAACTACTGCATCACGATCTCTGCCGTGGTCTGGAAGAGCGAAAAATCCTCGCAACGGTTCGACCACATCCCTTACTGCG
GGCGTGATGCCAAGGTCCGCGACATCACCGACGACTACACCTTCATGCTGCTCGGGTGGGCACAGATGCCGAAGAACGGT
GGAAAAAACACCGGAGCCTCAAGGACATTCGGGCCAAATCCGCCGCTGAAATCATTCCCGTCCCGGTCGATCATCATCGA
CACGGCGAACTCGCGAGCAAGCTTCATGTTTGCCCATCTTCTGATGAGCATGGGGCTCGATTTGACTGTCGACTATCTCC
ACGAGAACCGCCTGTGGGTAGTCAGCACAGTTCAATAG

Upstream 100 bases:

>100_bases
GCGACGCCGCACAGTCGGTCGCCACCTGCCGCTGATCGTTCAATAGCCATGCACGGGGTGCTGCGCATCCCGTGAGCCTC
CCTCTTGAGATTGACCCTCC

Downstream 100 bases:

>100_bases
CGGACAACCGGACAACGCATGTCCGCATCGCGGCCGAAAAATCAGTTCATTGGAATGGCAGCATATGGAAAGCACGTTCA
AACGCCAGTACGAAAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRHSYRAAVLAAACTMLTACAGLPQQMDQVADNLRQLGQSVSSPLVPSGPSAFSQSGLANVFKGTDPASKWPRVALTIDN
MPADAQNNWFEWRAAPVPAASVAVAPANYCITISAVVWKSEKSSQRFDHIPYCGRDAKVRDITDDYTFMLLGWAQMPKNG
GKNTGASRTFGPNPPLKSFPSRSIIIDTANSRASFMFAHLLMSMGLDLTVDYLHENRLWVVSTVQ

Sequences:

>Translated_225_residues
MRHSYRAAVLAAACTMLTACAGLPQQMDQVADNLRQLGQSVSSPLVPSGPSAFSQSGLANVFKGTDPASKWPRVALTIDN
MPADAQNNWFEWRAAPVPAASVAVAPANYCITISAVVWKSEKSSQRFDHIPYCGRDAKVRDITDDYTFMLLGWAQMPKNG
GKNTGASRTFGPNPPLKSFPSRSIIIDTANSRASFMFAHLLMSMGLDLTVDYLHENRLWVVSTVQ
>Mature_225_residues
MRHSYRAAVLAAACTMLTACAGLPQQMDQVADNLRQLGQSVSSPLVPSGPSAFSQSGLANVFKGTDPASKWPRVALTIDN
MPADAQNNWFEWRAAPVPAASVAVAPANYCITISAVVWKSEKSSQRFDHIPYCGRDAKVRDITDDYTFMLLGWAQMPKNG
GKNTGASRTFGPNPPLKSFPSRSIIIDTANSRASFMFAHLLMSMGLDLTVDYLHENRLWVVSTVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24510; Mature: 24510

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHSYRAAVLAAACTMLTACAGLPQQMDQVADNLRQLGQSVSSPLVPSGPSAFSQSGLAN
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHH
VFKGTDPASKWPRVALTIDNMPADAQNNWFEWRAAPVPAASVAVAPANYCITISAVVWKS
HHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEECCCCEEEEEEEEEECC
EKSSQRFDHIPYCGRDAKVRDITDDYTFMLLGWAQMPKNGGKNTGASRTFGPNPPLKSFP
CCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCC
SRSIIIDTANSRASFMFAHLLMSMGLDLTVDYLHENRLWVVSTVQ
CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECC
>Mature Secondary Structure
MRHSYRAAVLAAACTMLTACAGLPQQMDQVADNLRQLGQSVSSPLVPSGPSAFSQSGLAN
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHH
VFKGTDPASKWPRVALTIDNMPADAQNNWFEWRAAPVPAASVAVAPANYCITISAVVWKS
HHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEECCCCEEEEEEEEEECC
EKSSQRFDHIPYCGRDAKVRDITDDYTFMLLGWAQMPKNGGKNTGASRTFGPNPPLKSFP
CCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCC
SRSIIIDTANSRASFMFAHLLMSMGLDLTVDYLHENRLWVVSTVQ
CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA