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The map label for this gene is 187927424

Identifier: 187927424

GI number: 187927424

Start: 338216

End: 338899

Strand: Direct

Name: 187927424

Synonym: Rpic_0321

Alternate gene names: NA

Gene position: 338216-338899 (Clockwise)

Preceding gene: 187927423

Following gene: 187927425

Centisome position: 8.58

GC content: 61.99

Gene sequence:

>684_bases
ATGATGCGCAAGACGTTCGGAGCAGTGCTGGTGGCACTGATTTGCGGGCCCGCGTTGGCGGGCACGATCGACATGCTCGG
CACGGGCGGCGGCACGTATGCCATGCCGGTGACGAGCATGAAGGCCGCGCGCTATCTGCGTACCGTGCATCAGCGTTTCG
ACTTCAGTTGCGGGTCCGCTGCGGTGGCGACACTGCTCACGTATCAGTACGGCTATCCGGTGAGCGAGCAGACCGTGTTC
CAGGCCATGTACGAGCATGGCAACCAGGAGAAGATCCGGCGAGAAGGCTTTTCGCTGCTCGACATCAAACGCTATCTGGC
ATCTCTGGGCTTTGAGGCCGATGGTTTCGAGCAGCCGCTGGATGCATTGAAGGGCGCCCACCTGCCGGCCATCGTGTTGT
TGACCGAGAACGGCTATCACCACTTTGTGGTGGTCAAGGGCGTACAGGAAGGGCGTGTGCTGGTGGGCGATCCGGCCATG
GGCACGCGTGCGATTCCGCGTGCGAGTTTCGAGAGCATGTGGGACAACCATTTGCTGTTCGTTGTCCATAACCGCGAGGC
GGGGGCGACGTTCAACGCCTCATCGGATTGGCGCGTGGCACCGCGTGCACCGCTGGAGGAAGGCATGGACCGCAGCGGCC
TGGGAAACATCGTCGTTCCCAAGCATGGTCCGTCCGACTTCTGA

Upstream 100 bases:

>100_bases
GGGATCCCCACGGTCATCCAGAACAGCGGAGCGAACGTGCTGATCCAGAACGCCACCATTGTCAACGTGCAGTTCCGGCC
TTGAGCTTGAGAAGGGCGGA

Downstream 100 bases:

>100_bases
GCATCGTTGGCGCGCGACATTCCGGTAGTCGGGCAGGAGGGCATCATGAAGCGGTTTGGCAAGGTGGCGTGGGCCGCTGG
ATGGTTCGCGCTGGCTGCGG

Product: peptidase C39 bacteriocin processing

Products: NA

Alternate protein names: Double-Glycine Peptidase; C39 Family Peptidase; Periplasmic Protein; Bacteriocin Processing Protein Peptidase; Peptidase Protein; Cysteine Peptidase Family C; Periplasmic

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MMRKTFGAVLVALICGPALAGTIDMLGTGGGTYAMPVTSMKAARYLRTVHQRFDFSCGSAAVATLLTYQYGYPVSEQTVF
QAMYEHGNQEKIRREGFSLLDIKRYLASLGFEADGFEQPLDALKGAHLPAIVLLTENGYHHFVVVKGVQEGRVLVGDPAM
GTRAIPRASFESMWDNHLLFVVHNREAGATFNASSDWRVAPRAPLEEGMDRSGLGNIVVPKHGPSDF

Sequences:

>Translated_227_residues
MMRKTFGAVLVALICGPALAGTIDMLGTGGGTYAMPVTSMKAARYLRTVHQRFDFSCGSAAVATLLTYQYGYPVSEQTVF
QAMYEHGNQEKIRREGFSLLDIKRYLASLGFEADGFEQPLDALKGAHLPAIVLLTENGYHHFVVVKGVQEGRVLVGDPAM
GTRAIPRASFESMWDNHLLFVVHNREAGATFNASSDWRVAPRAPLEEGMDRSGLGNIVVPKHGPSDF
>Mature_227_residues
MMRKTFGAVLVALICGPALAGTIDMLGTGGGTYAMPVTSMKAARYLRTVHQRFDFSCGSAAVATLLTYQYGYPVSEQTVF
QAMYEHGNQEKIRREGFSLLDIKRYLASLGFEADGFEQPLDALKGAHLPAIVLLTENGYHHFVVVKGVQEGRVLVGDPAM
GTRAIPRASFESMWDNHLLFVVHNREAGATFNASSDWRVAPRAPLEEGMDRSGLGNIVVPKHGPSDF

Specific function: Unknown

COG id: COG3271

COG function: function code R; Predicted double-glycine peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24766; Mature: 24766

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50990 PEPTIDASE_C39

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKTFGAVLVALICGPALAGTIDMLGTGGGTYAMPVTSMKAARYLRTVHQRFDFSCGSA
CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCHH
AVATLLTYQYGYPVSEQTVFQAMYEHGNQEKIRREGFSLLDIKRYLASLGFEADGFEQPL
HHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHH
DALKGAHLPAIVLLTENGYHHFVVVKGVQEGRVLVGDPAMGTRAIPRASFESMWDNHLLF
HHHCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEE
VVHNREAGATFNASSDWRVAPRAPLEEGMDRSGLGNIVVPKHGPSDF
EEECCCCCCEECCCCCCEECCCCCHHHCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MMRKTFGAVLVALICGPALAGTIDMLGTGGGTYAMPVTSMKAARYLRTVHQRFDFSCGSA
CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCHH
AVATLLTYQYGYPVSEQTVFQAMYEHGNQEKIRREGFSLLDIKRYLASLGFEADGFEQPL
HHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHH
DALKGAHLPAIVLLTENGYHHFVVVKGVQEGRVLVGDPAMGTRAIPRASFESMWDNHLLF
HHHCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEE
VVHNREAGATFNASSDWRVAPRAPLEEGMDRSGLGNIVVPKHGPSDF
EEECCCCCCEECCCCCCEECCCCCHHHCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA