Click here to switch to the map view.

The map label for this gene is 187927425

Identifier: 187927425

GI number: 187927425

Start: 338945

End: 339481

Strand: Direct

Name: 187927425

Synonym: Rpic_0322

Alternate gene names: NA

Gene position: 338945-339481 (Clockwise)

Preceding gene: 187927424

Following gene: 187927429

Centisome position: 8.6

GC content: 63.31

Gene sequence:

>537_bases
ATGAAGCGGTTTGGCAAGGTGGCGTGGGCCGCTGGATGGTTCGCGCTGGCTGCGGCCGGGCATGCGTGTGCGGCCGGCAT
GGGCGGCATGGACAACAATCCGGTCCATGCCTGGCAGGCCGTGTCCGAAGACAAGCTCGACGACATGCGCGGCGGGTTTG
ATGTGCCCTCGCTCGCGGGGTTGCGCATTTCGTTCGGCATCGACCGTGCGGTCTTCATCAACGGCGACCTGGTGGCGAGT
GCATCGGTCAATATTCCCGATGTGGCACGCATGACGACCACGCAGGCGCAGCAACTGGCCTCGGTGGTCAATACGGTCAA
CATCGTGCAGAACGGTCCAAACAATGTCGCTCCGCCCGATGTGGCGACGGGGGGGGCAGCGGCAGCCACGGTCATCCAGA
ACAGCCTGAACAACCAGACGCTGCAGGCGGTGACGACCATCAATGCGGCGGTCAACAGCTTGCCGCAGTTCCGTCAGATG
AATCTCTCCAACGTGCTGCAAGGCGCGTTGGCCAACGTCGTCACCATGCTGCACTGA

Upstream 100 bases:

>100_bases
CCGCAGCGGCCTGGGAAACATCGTCGTTCCCAAGCATGGTCCGTCCGACTTCTGAGCATCGTTGGCGCGCGACATTCCGG
TAGTCGGGCAGGAGGGCATC

Downstream 100 bases:

>100_bases
GCTAGAACTGGATCGGCAGGCGCAGCGTGACGGTCAGGTCCGGCGTGTCACGCGTCAGGCCCGCACCCACCGACAGGTTC
AGCGCCATCTTGGGTGAGAG

Product: putative lipoprotein

Products: NA

Alternate protein names: Flagellin-Like Periplasmic Protein

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKRFGKVAWAAGWFALAAAGHACAAGMGGMDNNPVHAWQAVSEDKLDDMRGGFDVPSLAGLRISFGIDRAVFINGDLVAS
ASVNIPDVARMTTTQAQQLASVVNTVNIVQNGPNNVAPPDVATGGAAAATVIQNSLNNQTLQAVTTINAAVNSLPQFRQM
NLSNVLQGALANVVTMLH

Sequences:

>Translated_178_residues
MKRFGKVAWAAGWFALAAAGHACAAGMGGMDNNPVHAWQAVSEDKLDDMRGGFDVPSLAGLRISFGIDRAVFINGDLVAS
ASVNIPDVARMTTTQAQQLASVVNTVNIVQNGPNNVAPPDVATGGAAAATVIQNSLNNQTLQAVTTINAAVNSLPQFRQM
NLSNVLQGALANVVTMLH
>Mature_178_residues
MKRFGKVAWAAGWFALAAAGHACAAGMGGMDNNPVHAWQAVSEDKLDDMRGGFDVPSLAGLRISFGIDRAVFINGDLVAS
ASVNIPDVARMTTTQAQQLASVVNTVNIVQNGPNNVAPPDVATGGAAAATVIQNSLNNQTLQAVTTINAAVNSLPQFRQM
NLSNVLQGALANVVTMLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18437; Mature: 18437

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFGKVAWAAGWFALAAAGHACAAGMGGMDNNPVHAWQAVSEDKLDDMRGGFDVPSLAG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHCCCCCCCCCCC
LRISFGIDRAVFINGDLVASASVNIPDVARMTTTQAQQLASVVNTVNIVQNGPNNVAPPD
EEEEECCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VATGGAAAATVIQNSLNNQTLQAVTTINAAVNSLPQFRQMNLSNVLQGALANVVTMLH
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRFGKVAWAAGWFALAAAGHACAAGMGGMDNNPVHAWQAVSEDKLDDMRGGFDVPSLAG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHCCCCCCCCCCC
LRISFGIDRAVFINGDLVASASVNIPDVARMTTTQAQQLASVVNTVNIVQNGPNNVAPPD
EEEEECCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VATGGAAAATVIQNSLNNQTLQAVTTINAAVNSLPQFRQMNLSNVLQGALANVVTMLH
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA