Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927423
Identifier: 187927423
GI number: 187927423
Start: 337765
End: 338199
Strand: Direct
Name: 187927423
Synonym: Rpic_0320
Alternate gene names: NA
Gene position: 337765-338199 (Clockwise)
Preceding gene: 187927422
Following gene: 187927424
Centisome position: 8.57
GC content: 66.44
Gene sequence:
>435_bases ATGCGATCCGACAGAAGAACCACAGCAGGGTGGGCAGCATGGTGGTTGGCGTGCGGCCTGGTGGCGTGGCCGGCGGCAGC AGCAACGGCAGCGAACGATGCGCCAATTGCAGACGGTGCGCAGGTGGCCAGCACGGAAGCGGTGCGTCCCCCGGCCGCCG CGGCCATGTCGGTGCCTGGGCTCGGTCATGCGGTGGGCGCAGATCGGCTCGACAGCTATCGCGGCGGCACGCAGGATCTC TACCAGACCGTCAATGAAGCGCGCCTGTCGGGCACGGTGAGCGACAACGCCGCCATTAACGTGGCGACGGGGTCGAACAT CGTGCGCGACGGCTCGTTTGCCAATGCCAGCGGGATCCCCACGGTCATCCAGAACAGCGGAGCGAACGTGCTGATCCAGA ACGCCACCATTGTCAACGTGCAGTTCCGGCCTTGA
Upstream 100 bases:
>100_bases AGTGCCGCTGCGCGAGCGATGATGCTCAGCGCATGACGGTGGATGGGGCCGGACTGCATCCGTGGTCCGGCCCGCAGTTG GAGCGTATAGGAGACGTTTG
Downstream 100 bases:
>100_bases GCTTGAGAAGGGCGGAATGATGCGCAAGACGTTCGGAGCAGTGCTGGTGGCACTGATTTGCGGGCCCGCGTTGGCGGGCA CGATCGACATGCTCGGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRSDRRTTAGWAAWWLACGLVAWPAAAATAANDAPIADGAQVASTEAVRPPAAAAMSVPGLGHAVGADRLDSYRGGTQDL YQTVNEARLSGTVSDNAAINVATGSNIVRDGSFANASGIPTVIQNSGANVLIQNATIVNVQFRP
Sequences:
>Translated_144_residues MRSDRRTTAGWAAWWLACGLVAWPAAAATAANDAPIADGAQVASTEAVRPPAAAAMSVPGLGHAVGADRLDSYRGGTQDL YQTVNEARLSGTVSDNAAINVATGSNIVRDGSFANASGIPTVIQNSGANVLIQNATIVNVQFRP >Mature_144_residues MRSDRRTTAGWAAWWLACGLVAWPAAAATAANDAPIADGAQVASTEAVRPPAAAAMSVPGLGHAVGADRLDSYRGGTQDL YQTVNEARLSGTVSDNAAINVATGSNIVRDGSFANASGIPTVIQNSGANVLIQNATIVNVQFRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14689; Mature: 14689
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSDRRTTAGWAAWWLACGLVAWPAAAATAANDAPIADGAQVASTEAVRPPAAAAMSVPG CCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC LGHAVGADRLDSYRGGTQDLYQTVNEARLSGTVSDNAAINVATGSNIVRDGSFANASGIP CCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCC TVIQNSGANVLIQNATIVNVQFRP CEEECCCCEEEEECCEEEEEEECC >Mature Secondary Structure MRSDRRTTAGWAAWWLACGLVAWPAAAATAANDAPIADGAQVASTEAVRPPAAAAMSVPG CCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC LGHAVGADRLDSYRGGTQDLYQTVNEARLSGTVSDNAAINVATGSNIVRDGSFANASGIP CCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCC TVIQNSGANVLIQNATIVNVQFRP CEEECCCCEEEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA