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The map label for this gene is pqqE [H]

Identifier: 187927397

GI number: 187927397

Start: 310466

End: 311626

Strand: Direct

Name: pqqE [H]

Synonym: Rpic_0292

Alternate gene names: 187927397

Gene position: 310466-311626 (Clockwise)

Preceding gene: 187927396

Following gene: 187927400

Centisome position: 7.87

GC content: 60.55

Gene sequence:

>1161_bases
ATGACCGACGTGCAAACCTTGCCTGTTGACGGCGCGGCTGTGTCGCCCCCGCTTTGGCTGCTTGCGGAGTTGACGCATCG
TTGCCCGCTTCACTGCGTGTTTTGCTACAACCCGGTTGACTTCGCCCGCCGGCGCGACGAGCTCAGCACCGCACAATGGA
TCGACGTACTGCGCCAGGCGCGCCAGTTGGGCGCGGCTCAGTTGGGCTTTTCGGGGGGGGAGCCACTGCTGCGTGACGAC
CTTGAGGAACTCGTCGCCGAAGGGCGGCAACTGGGCTTCTACACCAACCTGATCACCTCGGGTATCGGATTGACCGAGGC
CCGGCTGGCCCGTCTCAAGGCAGCTGGACTCGACCACATTCAGCTTTCTTTCCAGGACTCCACGCGCGAGATGAACGACT
TTCTGTCGAACACGCGCACGTTCGATCTGAAATCACGCATTGCTTTGTTGATCAAGCAATACGACTATCCGATGGTGCTG
AACGTAGTACTGCACCGCCATAACCTCGATCATGTCGAGCGCATCATCGAGATGGCGGTAGCAATGGGCGTCGAGTATCT
CGAACTTGCCAATACTCAGTACTACGGGTGGGGGCTGATCAACCGGGCGCAGCTGATGCCCACGCGGGAGCAATTGCAGC
GTGCCGAGGCGGTGGTGAATGCATACCGTGGGAAGCTCGGCAACCGGCTGCGCATCCTGTTCGTGGTGCCGGACTACTTC
GAGTCCCGCCCCAAGGCTTGCATGAGCGGCTGGGGAGCGGTGTTCCTGGCTGTTACGCCAGATGGTACCGCCTTGCCATG
CCATGCGGCGCAGACCATTCCTGGCTTGCGCTTTCCTAATGTCGCAGATATGCCGCTTGCTGAAATCTGGAATCAAAGCG
AGGCGTTCAACCACTTCCGTGGTGATGCCTGGATGCAGGAGCCCTGTCGCTCCTGCCCGGAAAAGCATAAGGATTTCGGT
GGCTGTCGCTGCCAGGCACTTGCGCTCACAGGCGATGCGGCACAGGCTGATCCTGTGTGCGATAAGTCGCCCCATCACAG
CCGGGTGCAAGAGATCGTGCTGCATGCCCGGCACACGCAGCAAAGCGCCGTGACGGGCGAGCACCCCTTGATATTTCGCA
GCGATGCCAACTCGCTGCGCCTGTCGAGTGCTCCCAAGTGA

Upstream 100 bases:

>100_bases
CCACGCTCGTGAGTGAGCTCGAGCAGGCGTTCGGCTCGACGGGACTCCAGCAGGACGTGGAAGATTTCCTGCAAGCAGCC
GCAGACCAAGGGTGGATCCA

Downstream 100 bases:

>100_bases
TCACCCGGGACCGGGCACATTTAGGCGTTTTTCATCGAGCGCGCTCAACCCCATAGGACGAAGCGGAGTTGTTTTTCCAG
CCTTCCCGCTGCAGCATCAC

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTDVQTLPVDGAAVSPPLWLLAELTHRCPLHCVFCYNPVDFARRRDELSTAQWIDVLRQARQLGAAQLGFSGGEPLLRDD
LEELVAEGRQLGFYTNLITSGIGLTEARLARLKAAGLDHIQLSFQDSTREMNDFLSNTRTFDLKSRIALLIKQYDYPMVL
NVVLHRHNLDHVERIIEMAVAMGVEYLELANTQYYGWGLINRAQLMPTREQLQRAEAVVNAYRGKLGNRLRILFVVPDYF
ESRPKACMSGWGAVFLAVTPDGTALPCHAAQTIPGLRFPNVADMPLAEIWNQSEAFNHFRGDAWMQEPCRSCPEKHKDFG
GCRCQALALTGDAAQADPVCDKSPHHSRVQEIVLHARHTQQSAVTGEHPLIFRSDANSLRLSSAPK

Sequences:

>Translated_386_residues
MTDVQTLPVDGAAVSPPLWLLAELTHRCPLHCVFCYNPVDFARRRDELSTAQWIDVLRQARQLGAAQLGFSGGEPLLRDD
LEELVAEGRQLGFYTNLITSGIGLTEARLARLKAAGLDHIQLSFQDSTREMNDFLSNTRTFDLKSRIALLIKQYDYPMVL
NVVLHRHNLDHVERIIEMAVAMGVEYLELANTQYYGWGLINRAQLMPTREQLQRAEAVVNAYRGKLGNRLRILFVVPDYF
ESRPKACMSGWGAVFLAVTPDGTALPCHAAQTIPGLRFPNVADMPLAEIWNQSEAFNHFRGDAWMQEPCRSCPEKHKDFG
GCRCQALALTGDAAQADPVCDKSPHHSRVQEIVLHARHTQQSAVTGEHPLIFRSDANSLRLSSAPK
>Mature_385_residues
TDVQTLPVDGAAVSPPLWLLAELTHRCPLHCVFCYNPVDFARRRDELSTAQWIDVLRQARQLGAAQLGFSGGEPLLRDDL
EELVAEGRQLGFYTNLITSGIGLTEARLARLKAAGLDHIQLSFQDSTREMNDFLSNTRTFDLKSRIALLIKQYDYPMVLN
VVLHRHNLDHVERIIEMAVAMGVEYLELANTQYYGWGLINRAQLMPTREQLQRAEAVVNAYRGKLGNRLRILFVVPDYFE
SRPKACMSGWGAVFLAVTPDGTALPCHAAQTIPGLRFPNVADMPLAEIWNQSEAFNHFRGDAWMQEPCRSCPEKHKDFGG
CRCQALALTGDAAQADPVCDKSPHHSRVQEIVLHARHTQQSAVTGEHPLIFRSDANSLRLSSAPK

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43210; Mature: 43079

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVQTLPVDGAAVSPPLWLLAELTHRCPLHCVFCYNPVDFARRRDELSTAQWIDVLRQA
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
RQLGAAQLGFSGGEPLLRDDLEELVAEGRQLGFYTNLITSGIGLTEARLARLKAAGLDHI
HHCCHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEE
QLSFQDSTREMNDFLSNTRTFDLKSRIALLIKQYDYPMVLNVVLHRHNLDHVERIIEMAV
EEEECHHHHHHHHHHHCCCEECHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH
AMGVEYLELANTQYYGWGLINRAQLMPTREQLQRAEAVVNAYRGKLGNRLRILFVVPDYF
HHCHHHHHHCCCCEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHH
ESRPKACMSGWGAVFLAVTPDGTALPCHAAQTIPGLRFPNVADMPLAEIWNQSEAFNHFR
CCCCHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCHHHHHHHHC
GDAWMQEPCRSCPEKHKDFGGCRCQALALTGDAAQADPVCDKSPHHSRVQEIVLHARHTQ
CCHHHHHHHHHCHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QSAVTGEHPLIFRSDANSLRLSSAPK
HHCCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TDVQTLPVDGAAVSPPLWLLAELTHRCPLHCVFCYNPVDFARRRDELSTAQWIDVLRQA
CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
RQLGAAQLGFSGGEPLLRDDLEELVAEGRQLGFYTNLITSGIGLTEARLARLKAAGLDHI
HHCCHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEE
QLSFQDSTREMNDFLSNTRTFDLKSRIALLIKQYDYPMVLNVVLHRHNLDHVERIIEMAV
EEEECHHHHHHHHHHHCCCEECHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH
AMGVEYLELANTQYYGWGLINRAQLMPTREQLQRAEAVVNAYRGKLGNRLRILFVVPDYF
HHCHHHHHHCCCCEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHH
ESRPKACMSGWGAVFLAVTPDGTALPCHAAQTIPGLRFPNVADMPLAEIWNQSEAFNHFR
CCCCHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCHHHHHHHHC
GDAWMQEPCRSCPEKHKDFGGCRCQALALTGDAAQADPVCDKSPHHSRVQEIVLHARHTQ
CCHHHHHHHHHCHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QSAVTGEHPLIFRSDANSLRLSSAPK
HHCCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA