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The map label for this gene is pqqD [H]

Identifier: 187927396

GI number: 187927396

Start: 310209

End: 310469

Strand: Direct

Name: pqqD [H]

Synonym: Rpic_0291

Alternate gene names: 187927396

Gene position: 310209-310469 (Clockwise)

Preceding gene: 187927395

Following gene: 187927397

Centisome position: 7.87

GC content: 58.62

Gene sequence:

>261_bases
ATGACGATCCCCAAGAAACCCCGCGTTGCCAAAATGTTTCGCCTGCAATGGGAGCCAGCCCAGCAAGCTCACGTACTGCT
TTATCCGGAAGGCATGGTCAAGCTCAACCAGAGCGCAGCGGAAATCCTCAAACGCTGTGATGGCTCGCGCGACCTGTCCA
CGCTCGTGAGTGAGCTCGAGCAGGCGTTCGGCTCGACGGGACTCCAGCAGGACGTGGAAGATTTCCTGCAAGCAGCCGCA
GACCAAGGGTGGATCCAATGA

Upstream 100 bases:

>100_bases
CAAGAGCGCGCCCTCGACATCCTGCAATTCAAACTTGATGTCCTCTGGTCGATGCTTGACGCGATTGAGCGCGCGTATCC
CACTCGCTGAGCACGCCACA

Downstream 100 bases:

>100_bases
CCGACGTGCAAACCTTGCCTGTTGACGGCGCGGCTGTGTCGCCCCCGCTTTGGCTGCTTGCGGAGTTGACGCATCGTTGC
CCGCTTCACTGCGTGTTTTG

Product: coenzyme PQQ synthesis D

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D [H]

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MTIPKKPRVAKMFRLQWEPAQQAHVLLYPEGMVKLNQSAAEILKRCDGSRDLSTLVSELEQAFGSTGLQQDVEDFLQAAA
DQGWIQ

Sequences:

>Translated_86_residues
MTIPKKPRVAKMFRLQWEPAQQAHVLLYPEGMVKLNQSAAEILKRCDGSRDLSTLVSELEQAFGSTGLQQDVEDFLQAAA
DQGWIQ
>Mature_85_residues
TIPKKPRVAKMFRLQWEPAQQAHVLLYPEGMVKLNQSAAEILKRCDGSRDLSTLVSELEQAFGSTGLQQDVEDFLQAAAD
QGWIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008792
- InterPro:   IPR022479 [H]

Pfam domain/function: PF05402 PqqD [H]

EC number: NA

Molecular weight: Translated: 9659; Mature: 9528

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPKKPRVAKMFRLQWEPAQQAHVLLYPEGMVKLNQSAAEILKRCDGSRDLSTLVSELE
CCCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QAFGSTGLQQDVEDFLQAAADQGWIQ
HHHCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TIPKKPRVAKMFRLQWEPAQQAHVLLYPEGMVKLNQSAAEILKRCDGSRDLSTLVSELE
CCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QAFGSTGLQQDVEDFLQAAADQGWIQ
HHHCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA