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The map label for this gene is 187927400

Identifier: 187927400

GI number: 187927400

Start: 314244

End: 314918

Strand: Direct

Name: 187927400

Synonym: Rpic_0296

Alternate gene names: NA

Gene position: 314244-314918 (Clockwise)

Preceding gene: 187927397

Following gene: 187927401

Centisome position: 7.97

GC content: 61.48

Gene sequence:

>675_bases
ATGAAACGCGACGCCCACCTCTCTATGCCCACCAGCATCGACACCAGTCCGGTGCATCCGTTGTGGATGCGCTGTACGCA
CTGGTTCAATGCCTTGGCAGTGATGGTGTTGGTGCTGAGTGGTTGGCGCATCTACAACGCTGCACCGTTCTTTCCATTCA
CTATCCCAGCCTCCGCTACTTTGGGCGGATGGCTGGGAGGGGCGCTTCAGTGGCACTTCGCAGCGATGTGGTTGCTGGTG
GTCAACGGCTTGGTCTACCTAGTCATGAATGTCGCCAGCGGCCGACTGGCCCGCAAATTTTTCCCAGTCACGCCGGCGGG
TGTGCGGTGTGACATGGTCGCAGCGCTCAAGGGAAGGCTCTCGCATGCCGACCCGCGCCACTACAACAACGTGCAGCGGC
TCGCCTATCTGTTGGTGATATTGGACATCGTGCTGTTGGTGCTTTCGGGCTTGGTACTGTGGAAGTCGGTGCAGTTCGCG
ACCCTGCGAGAGCTACTTGGTGGCTACGAGGTAGCTCGCCGCATCCACTTCTGCGCGATGGCCGGCGCTGTGGCGTTCGT
GGTGGTGCACCTTGTGATGGTAGCTCTGGTGCCACGCACCCTGCTGACGATGTTAGGCGGCCGCGTGGCTGGCACCCCCT
CCCCGATCCAGGACCGGTCGTCGCACGACGCCTGA

Upstream 100 bases:

>100_bases
TTTAGGACTGATTGTCCCGCGATCTGACCGGCGCAGTTATCACAATTAATTGAACTTTGCGTGATGAATCGGTCAGGGGG
AGCGCCCAAGAATACGTTCC

Downstream 100 bases:

>100_bases
TTCGTCCCATGAAGATATTCAAAGCTCCCAGATTCGACGGCATTGATGGTGACGCTGTGCTCATCGAGGCACGCCGGCAG
ATTGCCCGTCACGTCAACCT

Product: thiosulfate reductase cytochrome subunit B

Products: NA

Alternate protein names: Cytochrome B; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Cytochrome; Conserved Protein; B-Type Cytochomre; Transmembrane Hydrogenase Cytochrome

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKRDAHLSMPTSIDTSPVHPLWMRCTHWFNALAVMVLVLSGWRIYNAAPFFPFTIPASATLGGWLGGALQWHFAAMWLLV
VNGLVYLVMNVASGRLARKFFPVTPAGVRCDMVAALKGRLSHADPRHYNNVQRLAYLLVILDIVLLVLSGLVLWKSVQFA
TLRELLGGYEVARRIHFCAMAGAVAFVVVHLVMVALVPRTLLTMLGGRVAGTPSPIQDRSSHDA

Sequences:

>Translated_224_residues
MKRDAHLSMPTSIDTSPVHPLWMRCTHWFNALAVMVLVLSGWRIYNAAPFFPFTIPASATLGGWLGGALQWHFAAMWLLV
VNGLVYLVMNVASGRLARKFFPVTPAGVRCDMVAALKGRLSHADPRHYNNVQRLAYLLVILDIVLLVLSGLVLWKSVQFA
TLRELLGGYEVARRIHFCAMAGAVAFVVVHLVMVALVPRTLLTMLGGRVAGTPSPIQDRSSHDA
>Mature_224_residues
MKRDAHLSMPTSIDTSPVHPLWMRCTHWFNALAVMVLVLSGWRIYNAAPFFPFTIPASATLGGWLGGALQWHFAAMWLLV
VNGLVYLVMNVASGRLARKFFPVTPAGVRCDMVAALKGRLSHADPRHYNNVQRLAYLLVILDIVLLVLSGLVLWKSVQFA
TLRELLGGYEVARRIHFCAMAGAVAFVVVHLVMVALVPRTLLTMLGGRVAGTPSPIQDRSSHDA

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24654; Mature: 24654

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDAHLSMPTSIDTSPVHPLWMRCTHWFNALAVMVLVLSGWRIYNAAPFFPFTIPASAT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEECCCCHH
LGGWLGGALQWHFAAMWLLVVNGLVYLVMNVASGRLARKFFPVTPAGVRCDMVAALKGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHH
SHADPRHYNNVQRLAYLLVILDIVLLVLSGLVLWKSVQFATLRELLGGYEVARRIHFCAM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAVAFVVVHLVMVALVPRTLLTMLGGRVAGTPSPIQDRSSHDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRDAHLSMPTSIDTSPVHPLWMRCTHWFNALAVMVLVLSGWRIYNAAPFFPFTIPASAT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEECCCCHH
LGGWLGGALQWHFAAMWLLVVNGLVYLVMNVASGRLARKFFPVTPAGVRCDMVAALKGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHH
SHADPRHYNNVQRLAYLLVILDIVLLVLSGLVLWKSVQFATLRELLGGYEVARRIHFCAM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAVAFVVVHLVMVALVPRTLLTMLGGRVAGTPSPIQDRSSHDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA