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The map label for this gene is nrtA [H]

Identifier: 187927344

GI number: 187927344

Start: 251870

End: 253150

Strand: Reverse

Name: nrtA [H]

Synonym: Rpic_0237

Alternate gene names: 187927344

Gene position: 253150-251870 (Counterclockwise)

Preceding gene: 187927345

Following gene: 187927343

Centisome position: 6.42

GC content: 63.7

Gene sequence:

>1281_bases
ATGGCCGCGCCAGACAAGACCGACGCTCTCGTCAACCCGATCAACCCGAAGCGCCGCAGCATCATGAAAGCCGCGGCGAC
GATTGCAGGAGGCAGTGCCGTGGCATTGATCGATCCGCTGGTGCGTGCCGGGGCCTGGGCCGCCGGCTCCGATGCGCCCG
AGAAGACGGAACTGAAGGTGGGTTTCATCCCGCTCACGGACTGTGCTTCGGTGGTCATGGCATCCACGCTCGGCCTCGAC
AAGAAGTACGGCATCAAGATCACGCCGTCGAAAGAAGCCTCGTGGGCCGGCGTACGCGACAAGCTCGTGTCGGGCGATCT
GGATGCGGCGCACGTGCTGTATGGCCTGATCTACGGCGTGCAGCTCGGCATTGGCGGCCCCAAGAAAGACATGGCCGTGC
TGATGACGCTCAACAACAACGGCCAGGCGATCACGCTGTCGTCCAAGCTCAAGGAAGCGGGCGTCAAGGATGGGGCGTCG
TTGAAGGCCGTCATGGCGAAAGACAAGCGCGAATATGTGTTCGCGCAGACCTTCCCGACCGGCACGCATGCGATGTGGCT
GTACTACTGGCTGGCCGCGCACGGCATCCACCCGCTGCAGGACGCGAAGGCGATCACCGTGCCCCCGCCGCAGATGGTCG
CGAACATGCGGGTGGGCAACATGGATGGCTACTGCGTGGGCGAGCCGTGGGGTGCCCGCGCGATTGCAGACAACATCGGC
TTTACCGCCGAGACCACACAGGCCATCTGGAAAGACCACCCCGAGAAGGTGCTCGGCACCACGGCGGAGTTCGTGCAGAA
GTATCCGAACACCGCGCGTGCGCTCACGGCAGCGGTGCTGGAGGCAAGCAAGTTCATCGATGCATCCGCATCGAACCGCC
GCAAGACGGCCGAGACCATTGCCGCCAAGTCCTACGTCAACACCGACATGGACATCATTCTCGACCGCATGCTCGGCCGC
TATACGAATGGTCTGGGCAAGACGTGGGACGACCCGGACCCGATGCGCTTCTATCACGACGGCGCGGTCAACTTTCCGTA
CCTGTCGGACGGCATGTGGTTCCTCACGCAGCACAAGCGCTGGGGCCTGCTGAAGGCGCATCCGGATTACCTGGCCGTGG
CCAAGCAGGTCAACCGCGTGGACATCTTCAAGCAGGCGGCAACCGCCACCGGCACGCCGCTGCCCAAGAGCGACATGCGC
ACGGCCAAGTTGATCGACGGCGTGGTGTGGGATGCGAAGAACCCTGCCGCGTATGCGGACGGCTTCAAGCTGAAAGCCTG
A

Upstream 100 bases:

>100_bases
GTACCGGCACGGGACAACGGCGTCCCGATGCACGGCAGCGCGCCCCTCTTTCGGATGGGCGGCGGTCGCGCGTCGGGACG
CTTTTTCTTTGGAGCCATGG

Downstream 100 bases:

>100_bases
CGCCTCCGGCCTTCCGAATTTCTGATTGCGGTCCCTCACATCGATGGAGCCCGACATGAACACGCTCGTCAAAACGTTGT
CCGGCGTGCAGTCCGACGCC

Product: putative nitrate transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MAAPDKTDALVNPINPKRRSIMKAAATIAGGSAVALIDPLVRAGAWAAGSDAPEKTELKVGFIPLTDCASVVMASTLGLD
KKYGIKITPSKEASWAGVRDKLVSGDLDAAHVLYGLIYGVQLGIGGPKKDMAVLMTLNNNGQAITLSSKLKEAGVKDGAS
LKAVMAKDKREYVFAQTFPTGTHAMWLYYWLAAHGIHPLQDAKAITVPPPQMVANMRVGNMDGYCVGEPWGARAIADNIG
FTAETTQAIWKDHPEKVLGTTAEFVQKYPNTARALTAAVLEASKFIDASASNRRKTAETIAAKSYVNTDMDIILDRMLGR
YTNGLGKTWDDPDPMRFYHDGAVNFPYLSDGMWFLTQHKRWGLLKAHPDYLAVAKQVNRVDIFKQAATATGTPLPKSDMR
TAKLIDGVVWDAKNPAAYADGFKLKA

Sequences:

>Translated_426_residues
MAAPDKTDALVNPINPKRRSIMKAAATIAGGSAVALIDPLVRAGAWAAGSDAPEKTELKVGFIPLTDCASVVMASTLGLD
KKYGIKITPSKEASWAGVRDKLVSGDLDAAHVLYGLIYGVQLGIGGPKKDMAVLMTLNNNGQAITLSSKLKEAGVKDGAS
LKAVMAKDKREYVFAQTFPTGTHAMWLYYWLAAHGIHPLQDAKAITVPPPQMVANMRVGNMDGYCVGEPWGARAIADNIG
FTAETTQAIWKDHPEKVLGTTAEFVQKYPNTARALTAAVLEASKFIDASASNRRKTAETIAAKSYVNTDMDIILDRMLGR
YTNGLGKTWDDPDPMRFYHDGAVNFPYLSDGMWFLTQHKRWGLLKAHPDYLAVAKQVNRVDIFKQAATATGTPLPKSDMR
TAKLIDGVVWDAKNPAAYADGFKLKA
>Mature_425_residues
AAPDKTDALVNPINPKRRSIMKAAATIAGGSAVALIDPLVRAGAWAAGSDAPEKTELKVGFIPLTDCASVVMASTLGLDK
KYGIKITPSKEASWAGVRDKLVSGDLDAAHVLYGLIYGVQLGIGGPKKDMAVLMTLNNNGQAITLSSKLKEAGVKDGASL
KAVMAKDKREYVFAQTFPTGTHAMWLYYWLAAHGIHPLQDAKAITVPPPQMVANMRVGNMDGYCVGEPWGARAIADNIGF
TAETTQAIWKDHPEKVLGTTAEFVQKYPNTARALTAAVLEASKFIDASASNRRKTAETIAAKSYVNTDMDIILDRMLGRY
TNGLGKTWDDPDPMRFYHDGAVNFPYLSDGMWFLTQHKRWGLLKAHPDYLAVAKQVNRVDIFKQAATATGTPLPKSDMRT
AKLIDGVVWDAKNPAAYADGFKLKA

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46013; Mature: 45882

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPDKTDALVNPINPKRRSIMKAAATIAGGSAVALIDPLVRAGAWAAGSDAPEKTELKV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEE
GFIPLTDCASVVMASTLGLDKKYGIKITPSKEASWAGVRDKLVSGDLDAAHVLYGLIYGV
EEEEHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
QLGIGGPKKDMAVLMTLNNNGQAITLSSKLKEAGVKDGASLKAVMAKDKREYVFAQTFPT
HCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCC
GTHAMWLYYWLAAHGIHPLQDAKAITVPPPQMVANMRVGNMDGYCVGEPWGARAIADNIG
CCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCEECCCCCEEECCCCCCHHHHHCCC
FTAETTQAIWKDHPEKVLGTTAEFVQKYPNTARALTAAVLEASKFIDASASNRRKTAETI
CCHHHHHHHHHCCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AAKSYVNTDMDIILDRMLGRYTNGLGKTWDDPDPMRFYHDGAVNFPYLSDGMWFLTQHKR
HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEECCCEEEEEECCC
WGLLKAHPDYLAVAKQVNRVDIFKQAATATGTPLPKSDMRTAKLIDGVVWDAKNPAAYAD
CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCC
GFKLKA
CCEECC
>Mature Secondary Structure 
AAPDKTDALVNPINPKRRSIMKAAATIAGGSAVALIDPLVRAGAWAAGSDAPEKTELKV
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEE
GFIPLTDCASVVMASTLGLDKKYGIKITPSKEASWAGVRDKLVSGDLDAAHVLYGLIYGV
EEEEHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
QLGIGGPKKDMAVLMTLNNNGQAITLSSKLKEAGVKDGASLKAVMAKDKREYVFAQTFPT
HCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCC
GTHAMWLYYWLAAHGIHPLQDAKAITVPPPQMVANMRVGNMDGYCVGEPWGARAIADNIG
CCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCEECCCCCEEECCCCCCHHHHHCCC
FTAETTQAIWKDHPEKVLGTTAEFVQKYPNTARALTAAVLEASKFIDASASNRRKTAETI
CCHHHHHHHHHCCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AAKSYVNTDMDIILDRMLGRYTNGLGKTWDDPDPMRFYHDGAVNFPYLSDGMWFLTQHKR
HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEECCCEEEEEECCC
WGLLKAHPDYLAVAKQVNRVDIFKQAATATGTPLPKSDMRTAKLIDGVVWDAKNPAAYAD
CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCC
GFKLKA
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]