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The map label for this gene is 187927333

Identifier: 187927333

GI number: 187927333

Start: 239911

End: 240567

Strand: Direct

Name: 187927333

Synonym: Rpic_0226

Alternate gene names: NA

Gene position: 239911-240567 (Clockwise)

Preceding gene: 187927332

Following gene: 187927334

Centisome position: 6.09

GC content: 64.99

Gene sequence:

>657_bases
ATGGTGAATCAGGAATCTGCACCCGGCGCGCCGGGCACACTCGGGTCGTCCGAAGACCCGCGCATCGACGCGCGCACACG
CCGCGGCCGCTTGATGATGCTGTTCCTGCTGCTGGTGTGCGCCTCTCCGGTGATCGCGTCGTACCTTGCGTATTACGTCT
TCACCCCCGCCGGCGGCAAGGCGGCGTACGGCGCGCTGGTCGATCCGCAGCGCCCCATTCCGACCGGTCTGATGGTGCAG
GACGAGCACGGTGCTGAAGTGCCGCTCGCCAGCCTCAAGGGCAAATGGCTGATGGTGTCCGTAGATGGCAGCGCCTGCGA
CGACAACTGCGCGCGCAAGCTGTTCACCATGCGCCAGCTGCGCATCGGCCAGGGCCCGGACCGCGACCGTATCGTCCCTG
TCTGGCTAGTGACCGACCGGGGGGAGATCGACCCGCGCCTCATCAAGGCTTACAACGACGATTACGGTGCCGTGCGCTTC
CTGCGCGCGCCCGATCTGCCTAAGAACTGGCTTGCCGACGGCAAGACGCCGCCCACAGACCACCTCTTCCTGGTCGATCC
GCTCGGCAACCTGATGATGCAGTTCCCGAAAGATCCGGATCCGAAGAAGGTGCGCGCAGACATGACGCGGCTCTTGAAGT
ATTCGCGCATCGGATAA

Upstream 100 bases:

>100_bases
AGCGTGCGGCGTTATCGCCGCTTGGCAGGCACCTCCGAGCCTGCCTGAATACGAACTCGCGTTGCGGCTTAGTGCCGCAG
CTGAATGTATTGGGAATCAC

Downstream 100 bases:

>100_bases
GCCATGCTGCTGCAACTTGCTTCCATTGGCATCCTGATCGCGCTGATCCCACTCTGTTACGTGCTGGTCAAAGGGGATCG
CAACAAGTACCGGAAGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Sco1/SenC Family Cytochrome Oxidase Assembly Protein

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MVNQESAPGAPGTLGSSEDPRIDARTRRGRLMMLFLLLVCASPVIASYLAYYVFTPAGGKAAYGALVDPQRPIPTGLMVQ
DEHGAEVPLASLKGKWLMVSVDGSACDDNCARKLFTMRQLRIGQGPDRDRIVPVWLVTDRGEIDPRLIKAYNDDYGAVRF
LRAPDLPKNWLADGKTPPTDHLFLVDPLGNLMMQFPKDPDPKKVRADMTRLLKYSRIG

Sequences:

>Translated_218_residues
MVNQESAPGAPGTLGSSEDPRIDARTRRGRLMMLFLLLVCASPVIASYLAYYVFTPAGGKAAYGALVDPQRPIPTGLMVQ
DEHGAEVPLASLKGKWLMVSVDGSACDDNCARKLFTMRQLRIGQGPDRDRIVPVWLVTDRGEIDPRLIKAYNDDYGAVRF
LRAPDLPKNWLADGKTPPTDHLFLVDPLGNLMMQFPKDPDPKKVRADMTRLLKYSRIG
>Mature_218_residues
MVNQESAPGAPGTLGSSEDPRIDARTRRGRLMMLFLLLVCASPVIASYLAYYVFTPAGGKAAYGALVDPQRPIPTGLMVQ
DEHGAEVPLASLKGKWLMVSVDGSACDDNCARKLFTMRQLRIGQGPDRDRIVPVWLVTDRGEIDPRLIKAYNDDYGAVRF
LRAPDLPKNWLADGKTPPTDHLFLVDPLGNLMMQFPKDPDPKKVRADMTRLLKYSRIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24109; Mature: 24109

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNQESAPGAPGTLGSSEDPRIDARTRRGRLMMLFLLLVCASPVIASYLAYYVFTPAGGK
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHEECCCCCC
AAYGALVDPQRPIPTGLMVQDEHGAEVPLASLKGKWLMVSVDGSACDDNCARKLFTMRQL
EECCCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH
RIGQGPDRDRIVPVWLVTDRGEIDPRLIKAYNDDYGAVRFLRAPDLPKNWLADGKTPPTD
HCCCCCCCCCEEEEEEEECCCCCCHHHHEECCCCCCEEEEEECCCCCHHHHCCCCCCCCC
HLFLVDPLGNLMMQFPKDPDPKKVRADMTRLLKYSRIG
CEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVNQESAPGAPGTLGSSEDPRIDARTRRGRLMMLFLLLVCASPVIASYLAYYVFTPAGGK
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHEECCCCCC
AAYGALVDPQRPIPTGLMVQDEHGAEVPLASLKGKWLMVSVDGSACDDNCARKLFTMRQL
EECCCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH
RIGQGPDRDRIVPVWLVTDRGEIDPRLIKAYNDDYGAVRFLRAPDLPKNWLADGKTPPTD
HCCCCCCCCCEEEEEEEECCCCCCHHHHEECCCCCCEEEEEECCCCCHHHHCCCCCCCCC
HLFLVDPLGNLMMQFPKDPDPKKVRADMTRLLKYSRIG
CEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA