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The map label for this gene is 187927332

Identifier: 187927332

GI number: 187927332

Start: 239088

End: 239858

Strand: Direct

Name: 187927332

Synonym: Rpic_0225

Alternate gene names: NA

Gene position: 239088-239858 (Clockwise)

Preceding gene: 187927330

Following gene: 187927333

Centisome position: 6.06

GC content: 65.5

Gene sequence:

>771_bases
ATGACCGAGCGCGTACCGATGCGACGCTGGTTTGCGCCTGTGCCGATGTTGGCAGGTGTGGCACTGATCGCGCTCACGAG
CTTGCTGGGGCGTTGGCAGCTGACGCGTGCGCACGAGCGCATCGAGCGCCAAGCCCGCATTATGGCGCTGGAAAATGCGC
CCGCCCAGCGCATCACAGCTCAGCCGGTGACAGCAGATTCAGTAATGTACAGGCCGGTGCTGCTGCGTGGAACGTTCGAC
GTGGCGCACACGGTGCTGCTCGAGAACCGCCCGCACGTCACCAACGACGTATCGCGCCCGGGTTTCGAGGTGCTCATCCC
GCTGATGCTGGAAGGTGCGGGCGGGCGCGCCGTGTTGGTCGACCGGGGCTGGTTGCCGCGCGATCCGGCCGATCGCACGC
GCATCGCGCCGTACACCACGCCGGCGGGCGAAGTGCAGGTCGAAGGGATGGCGGTGCCGCATGCCAGCCGAGTCTTCAGT
CTGGGCAGCAAGGACGGCGCTGATGAAGTTGGCCAGCGACTTAGGCAGAATATCGACCTCGACGCTTTCTCGCGCGAAAT
CGGCGTGCCGCTCCAACCCTTCGTGGTGCAGCAGCAGTCCGACGTGGAGGACGGCCTGTTGCGCGATTGGCCGCGCGCAG
ACTTGGGCGCTGAGCGCAATTACGGTTACGCATTCCAATGGTTTGCGATGGCGGCGGCAGTGCTTGGGCTGATGGTCTTC
TACAGCGTGCGGCGTTATCGCCGCTTGGCAGGCACCTCCGAGCCTGCCTGA

Upstream 100 bases:

>100_bases
GCAGAAACGCAATGGCAACGACGATGCGCATGGAGGGTTGCCGGTTGGGCAATGACGGGTTGGAAATGGCTGCCGGGCAT
TATCTCACCGAGGCCGCGCA

Downstream 100 bases:

>100_bases
ATACGAACTCGCGTTGCGGCTTAGTGCCGCAGCTGAATGTATTGGGAATCACATGGTGAATCAGGAATCTGCACCCGGCG
CGCCGGGCACACTCGGGTCG

Product: putative transmembrane cytochrome oxidase complex biogenesis factor transmembrane protein

Products: NA

Alternate protein names: Transmembrane Cytochrome Oxidase; Transmembrane Cytochrome Oxidase Complex Biogenesis Factor; SURF1-Like Protein; Transmembrane Cytochrome Oxidase Complex Protein; Cytochrome C Oxidase Assembly; Surfeit Locus 1-Like Protein; Surfeit Locus 1 Family Protein; Cytochrome Oxidase Complex Biogenesis Factor; Membrane Spanning Protein; Cytochrome Oxidase Assembly Protein SurF1

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTERVPMRRWFAPVPMLAGVALIALTSLLGRWQLTRAHERIERQARIMALENAPAQRITAQPVTADSVMYRPVLLRGTFD
VAHTVLLENRPHVTNDVSRPGFEVLIPLMLEGAGGRAVLVDRGWLPRDPADRTRIAPYTTPAGEVQVEGMAVPHASRVFS
LGSKDGADEVGQRLRQNIDLDAFSREIGVPLQPFVVQQQSDVEDGLLRDWPRADLGAERNYGYAFQWFAMAAAVLGLMVF
YSVRRYRRLAGTSEPA

Sequences:

>Translated_256_residues
MTERVPMRRWFAPVPMLAGVALIALTSLLGRWQLTRAHERIERQARIMALENAPAQRITAQPVTADSVMYRPVLLRGTFD
VAHTVLLENRPHVTNDVSRPGFEVLIPLMLEGAGGRAVLVDRGWLPRDPADRTRIAPYTTPAGEVQVEGMAVPHASRVFS
LGSKDGADEVGQRLRQNIDLDAFSREIGVPLQPFVVQQQSDVEDGLLRDWPRADLGAERNYGYAFQWFAMAAAVLGLMVF
YSVRRYRRLAGTSEPA
>Mature_255_residues
TERVPMRRWFAPVPMLAGVALIALTSLLGRWQLTRAHERIERQARIMALENAPAQRITAQPVTADSVMYRPVLLRGTFDV
AHTVLLENRPHVTNDVSRPGFEVLIPLMLEGAGGRAVLVDRGWLPRDPADRTRIAPYTTPAGEVQVEGMAVPHASRVFSL
GSKDGADEVGQRLRQNIDLDAFSREIGVPLQPFVVQQQSDVEDGLLRDWPRADLGAERNYGYAFQWFAMAAAVLGLMVFY
SVRRYRRLAGTSEPA

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28541; Mature: 28410

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERVPMRRWFAPVPMLAGVALIALTSLLGRWQLTRAHERIERQARIMALENAPAQRITA
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEC
QPVTADSVMYRPVLLRGTFDVAHTVLLENRPHVTNDVSRPGFEVLIPLMLEGAGGRAVLV
CCCCCCHHHHCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE
DRGWLPRDPADRTRIAPYTTPAGEVQVEGMAVPHASRVFSLGSKDGADEVGQRLRQNIDL
ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHCCCH
DAFSREIGVPLQPFVVQQQSDVEDGLLRDWPRADLGAERNYGYAFQWFAMAAAVLGLMVF
HHHHHHHCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YSVRRYRRLAGTSEPA
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TERVPMRRWFAPVPMLAGVALIALTSLLGRWQLTRAHERIERQARIMALENAPAQRITA
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEC
QPVTADSVMYRPVLLRGTFDVAHTVLLENRPHVTNDVSRPGFEVLIPLMLEGAGGRAVLV
CCCCCCHHHHCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE
DRGWLPRDPADRTRIAPYTTPAGEVQVEGMAVPHASRVFSLGSKDGADEVGQRLRQNIDL
ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHCCCH
DAFSREIGVPLQPFVVQQQSDVEDGLLRDWPRADLGAERNYGYAFQWFAMAAAVLGLMVF
HHHHHHHCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YSVRRYRRLAGTSEPA
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA