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The map label for this gene is ctaA [H]

Identifier: 187927334

GI number: 187927334

Start: 240571

End: 241662

Strand: Direct

Name: ctaA [H]

Synonym: Rpic_0227

Alternate gene names: 187927334

Gene position: 240571-241662 (Clockwise)

Preceding gene: 187927333

Following gene: 187927335

Centisome position: 6.1

GC content: 65.2

Gene sequence:

>1092_bases
ATGCTGCTGCAACTTGCTTCCATTGGCATCCTGATCGCGCTGATCCCACTCTGTTACGTGCTGGTCAAAGGGGATCGCAA
CAAGTACCGGAAGCTGGTGTGGATCACCGCTTTCCTCACGCTGGACTTGATCATGTTCGGCAGCTTCACGCGTCTGACGG
ATTCAGGCCTCGGTTGCCCGGATTGGCCGGGCTGCTACGGCACCTCCAACCCGTTCCACGCCCGTGAAGACATCCATGCT
GCACAGGCCGCCATGCCGAGCGGCCCCGTCACCTGGATGAAAGCGTGGATCGAGATGACGCACCGCTACTTCGCGCTTGC
GTTGGGCGTGCTGATCATCACGCTGGTGGTGCTGGCGTGGGTCAAGCGCAAGGAACTGCAGCAGTCTCCCTGGTATGCGA
CGGCGGTGCTGGCGCTGGTGTGTGTGCAAGGCGCCTTTGGCGCGTGGACGGTCACGCTCAAGCTGCAGCCGGCCATCGTG
GTGACGCACTTGCTGCTCGGCATGTCGCTGCTGGCCGCGCTGATCTGGCTCGGCTGCAAGAACGACGCGCCGCGTGCGGT
CGATGCGCGCGGCGCCTCGTTGCGCATGGCGGTGGCCATCGGGCTCGTGCTGCTCGTTGTGCAGATTGCCCTGGGTGGCT
GGGTCAGCACGAACTACGCTGTGCTGGCCTGTACCGATTTTCCGCTGTGCAACGGCCAGTGGGTTCCGCCGATGGACTTT
GCACACGGCTTCACATTCTGGCGCCAGCTCGGCAAGACCGCCGGCGGCGATTTCATCTCGCACGATGCGCTGGTCGCCAT
CCATTGGACGCACCGGGTGTTTGCAGTCGTTGTGCTGAGCTACCTGGCGTGGCTCGGTGCGCGCGCACGTCGCATTGGCG
GCCTCGGCCGTGTCGCGACGGTGCTGCTCGTTGTGCTGGCCGTGCAATTGGCGACCGGGCTTTCGAACATCGTGCTGGGG
TGGCCGCTGCTGGCCGCCGTGGCGCACAACGGCGGCGCGGCCGTGCTGCTGTTGCTGATGGTGCGTCTGCATTACCTGAT
CGGGCTCGCGCAGGCGCGGGCGCCGATGCCTGTGGCGGCTGCCGTCGTCTGA

Upstream 100 bases:

>100_bases
GCTCGGCAACCTGATGATGCAGTTCCCGAAAGATCCGGATCCGAAGAAGGTGCGCGCAGACATGACGCGGCTCTTGAAGT
ATTCGCGCATCGGATAAGCC

Downstream 100 bases:

>100_bases
ATGCCGTCTGACCGTTTTTTATGAATACCGTGGCAACCCCAACAACTTCCACTCAACTTCCTGGCTGGCGAACGACCGCA
TCGCAGTATGCGGCGCTGAC

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLLQLASIGILIALIPLCYVLVKGDRNKYRKLVWITAFLTLDLIMFGSFTRLTDSGLGCPDWPGCYGTSNPFHAREDIHA
AQAAMPSGPVTWMKAWIEMTHRYFALALGVLIITLVVLAWVKRKELQQSPWYATAVLALVCVQGAFGAWTVTLKLQPAIV
VTHLLLGMSLLAALIWLGCKNDAPRAVDARGASLRMAVAIGLVLLVVQIALGGWVSTNYAVLACTDFPLCNGQWVPPMDF
AHGFTFWRQLGKTAGGDFISHDALVAIHWTHRVFAVVVLSYLAWLGARARRIGGLGRVATVLLVVLAVQLATGLSNIVLG
WPLLAAVAHNGGAAVLLLLMVRLHYLIGLAQARAPMPVAAAVV

Sequences:

>Translated_363_residues
MLLQLASIGILIALIPLCYVLVKGDRNKYRKLVWITAFLTLDLIMFGSFTRLTDSGLGCPDWPGCYGTSNPFHAREDIHA
AQAAMPSGPVTWMKAWIEMTHRYFALALGVLIITLVVLAWVKRKELQQSPWYATAVLALVCVQGAFGAWTVTLKLQPAIV
VTHLLLGMSLLAALIWLGCKNDAPRAVDARGASLRMAVAIGLVLLVVQIALGGWVSTNYAVLACTDFPLCNGQWVPPMDF
AHGFTFWRQLGKTAGGDFISHDALVAIHWTHRVFAVVVLSYLAWLGARARRIGGLGRVATVLLVVLAVQLATGLSNIVLG
WPLLAAVAHNGGAAVLLLLMVRLHYLIGLAQARAPMPVAAAVV
>Mature_363_residues
MLLQLASIGILIALIPLCYVLVKGDRNKYRKLVWITAFLTLDLIMFGSFTRLTDSGLGCPDWPGCYGTSNPFHAREDIHA
AQAAMPSGPVTWMKAWIEMTHRYFALALGVLIITLVVLAWVKRKELQQSPWYATAVLALVCVQGAFGAWTVTLKLQPAIV
VTHLLLGMSLLAALIWLGCKNDAPRAVDARGASLRMAVAIGLVLLVVQIALGGWVSTNYAVLACTDFPLCNGQWVPPMDF
AHGFTFWRQLGKTAGGDFISHDALVAIHWTHRVFAVVVLSYLAWLGARARRIGGLGRVATVLLVVLAVQLATGLSNIVLG
WPLLAAVAHNGGAAVLLLLMVRLHYLIGLAQARAPMPVAAAVV

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 39168; Mature: 39168

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQLASIGILIALIPLCYVLVKGDRNKYRKLVWITAFLTLDLIMFGSFTRLTDSGLGCP
CEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
DWPGCYGTSNPFHAREDIHAAQAAMPSGPVTWMKAWIEMTHRYFALALGVLIITLVVLAW
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRKELQQSPWYATAVLALVCVQGAFGAWTVTLKLQPAIVVTHLLLGMSLLAALIWLGCK
HHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCC
NDAPRAVDARGASLRMAVAIGLVLLVVQIALGGWVSTNYAVLACTDFPLCNGQWVPPMDF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHH
AHGFTFWRQLGKTAGGDFISHDALVAIHWTHRVFAVVVLSYLAWLGARARRIGGLGRVAT
HHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VLLVVLAVQLATGLSNIVLGWPLLAAVAHNGGAAVLLLLMVRLHYLIGLAQARAPMPVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AVV
HCC
>Mature Secondary Structure
MLLQLASIGILIALIPLCYVLVKGDRNKYRKLVWITAFLTLDLIMFGSFTRLTDSGLGCP
CEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
DWPGCYGTSNPFHAREDIHAAQAAMPSGPVTWMKAWIEMTHRYFALALGVLIITLVVLAW
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRKELQQSPWYATAVLALVCVQGAFGAWTVTLKLQPAIVVTHLLLGMSLLAALIWLGCK
HHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCC
NDAPRAVDARGASLRMAVAIGLVLLVVQIALGGWVSTNYAVLACTDFPLCNGQWVPPMDF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHH
AHGFTFWRQLGKTAGGDFISHDALVAIHWTHRVFAVVVLSYLAWLGARARRIGGLGRVAT
HHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VLLVVLAVQLATGLSNIVLGWPLLAAVAHNGGAAVLLLLMVRLHYLIGLAQARAPMPVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AVV
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]