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The map label for this gene is ybeD [C]

Identifier: 187927290

GI number: 187927290

Start: 200916

End: 201215

Strand: Reverse

Name: ybeD [C]

Synonym: Rpic_0182

Alternate gene names: 187927290

Gene position: 201215-200916 (Counterclockwise)

Preceding gene: 187927291

Following gene: 187927288

Centisome position: 5.1

GC content: 61.33

Gene sequence:

>300_bases
ATGACCTCCTCTCACACGCCCCCGCCGGGCCATATTCCGCCCGAACAGTCGCTCATCGAGTACCCGAGCGATTTCCCCAT
CAAGGTGATGGGGCCGATGCATGACGACTTTGCCGCGACCATTGTCGAGGTCGTCCGCCTACACGATCCGGAGTTCCACG
AAGGGCGCCTGGAAAAGCGTCCGTCCTCCAGTGGCAACTACCTGGGCCTGACGGTGATCGTGCGTGCGACGAGCCGCGAA
CAGCTCGACGCGCTTTACCAGGCGCTGACGAGCCATCCGATGGTAAAAATCGTGCTGTAA

Upstream 100 bases:

>100_bases
TGGCGCTCGAAGCGGTGCCGGAAGCCGGCTTCGTCGGCCGCACGATCGACGCGGTCAAGCTGTGGTTTAAAAAGAAGTAG
TCGTCCCCACTTACTTCGAC

Downstream 100 bases:

>100_bases
CGCACCTCCGCAGCACTCAGCAGAACGCAAAACGCCCCGGTCATGCCGGGGCGTTCTGCTTTGTAGAGGATTTTTTCCGA
TGCCCGGGCTCAGCCCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MTSSHTPPPGHIPPEQSLIEYPSDFPIKVMGPMHDDFAATIVEVVRLHDPEFHEGRLEKRPSSSGNYLGLTVIVRATSRE
QLDALYQALTSHPMVKIVL

Sequences:

>Translated_99_residues
MTSSHTPPPGHIPPEQSLIEYPSDFPIKVMGPMHDDFAATIVEVVRLHDPEFHEGRLEKRPSSSGNYLGLTVIVRATSRE
QLDALYQALTSHPMVKIVL
>Mature_98_residues
TSSHTPPPGHIPPEQSLIEYPSDFPIKVMGPMHDDFAATIVEVVRLHDPEFHEGRLEKRPSSSGNYLGLTVIVRATSREQ
LDALYQALTSHPMVKIVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 11030; Mature: 10899

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSHTPPPGHIPPEQSLIEYPSDFPIKVMGPMHDDFAATIVEVVRLHDPEFHEGRLEKR
CCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PSSSGNYLGLTVIVRATSREQLDALYQALTSHPMVKIVL
CCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
TSSHTPPPGHIPPEQSLIEYPSDFPIKVMGPMHDDFAATIVEVVRLHDPEFHEGRLEKR
CCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PSSSGNYLGLTVIVRATSREQLDALYQALTSHPMVKIVL
CCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]