Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927288
Identifier: 187927288
GI number: 187927288
Start: 199354
End: 199713
Strand: Reverse
Name: 187927288
Synonym: Rpic_0180
Alternate gene names: NA
Gene position: 199713-199354 (Counterclockwise)
Preceding gene: 187927290
Following gene: 187927287
Centisome position: 5.07
GC content: 63.89
Gene sequence:
>360_bases ATGAAAGCTGTACTAACAAAAATTGTATTCACTCTGCAGCCCGGCGAAGTGGTGGCATTGCGCATGCCGGCCAACCAGAA TCTGCGCGTCGAAGAAGCCTGCGGTCGCGACGTATGGGTCACGCACGAGAACAAAGCCGGCGACGAATGGCTGCGCGCGG GCGGCAGCGTTGCCGTGAAGCGCGGCGAAGAAATCGTCGTCTCGGTAGACCCGAAAGCCCTTGGCCCAGTGGCATTGGCA GTAGAAGCCACCGACGGCCACATGCCGCGCAAGCCGTGGCACGTCACGAACGGCTGGCGCCACACGCTCGCGGCGCTCGG CTGGAACGAGCACGCCGACACGCCCATCGTGGCGGCCTGA
Upstream 100 bases:
>100_bases TATCAAGAAACGCAATATATATCGTTTGGTACTAGGCAACCAAGCGCCTAGACTTCCTTCAACGGCAAGGCCCCATCCCG ATGCCGTGAAGGAGCCGATC
Downstream 100 bases:
>100_bases GCGCGAAATCTGTTTCAAGCCTCCTTTTGCGGCATCTGCCGCAAAAGCCGATGCCGGCGCCGATGCCTCCCATCGCGCCG GCATTTTTTTGCCCGACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKAVLTKIVFTLQPGEVVALRMPANQNLRVEEACGRDVWVTHENKAGDEWLRAGGSVAVKRGEEIVVSVDPKALGPVALA VEATDGHMPRKPWHVTNGWRHTLAALGWNEHADTPIVAA
Sequences:
>Translated_119_residues MKAVLTKIVFTLQPGEVVALRMPANQNLRVEEACGRDVWVTHENKAGDEWLRAGGSVAVKRGEEIVVSVDPKALGPVALA VEATDGHMPRKPWHVTNGWRHTLAALGWNEHADTPIVAA >Mature_119_residues MKAVLTKIVFTLQPGEVVALRMPANQNLRVEEACGRDVWVTHENKAGDEWLRAGGSVAVKRGEEIVVSVDPKALGPVALA VEATDGHMPRKPWHVTNGWRHTLAALGWNEHADTPIVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12919; Mature: 12919
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVLTKIVFTLQPGEVVALRMPANQNLRVEEACGRDVWVTHENKAGDEWLRAGGSVAVK CHHHEEEEEEEECCCCEEEEECCCCCCEEEHHHCCCCEEEEECCCCCHHHHHCCCEEEEE RGEEIVVSVDPKALGPVALAVEATDGHMPRKPWHVTNGWRHTLAALGWNEHADTPIVAA CCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCCEEEC >Mature Secondary Structure MKAVLTKIVFTLQPGEVVALRMPANQNLRVEEACGRDVWVTHENKAGDEWLRAGGSVAVK CHHHEEEEEEEECCCCEEEEECCCCCCEEEHHHCCCCEEEEECCCCCHHHHHCCCEEEEE RGEEIVVSVDPKALGPVALAVEATDGHMPRKPWHVTNGWRHTLAALGWNEHADTPIVAA CCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA