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The map label for this gene is ychJ [C]

Identifier: 187927229

GI number: 187927229

Start: 141591

End: 142031

Strand: Reverse

Name: ychJ [C]

Synonym: Rpic_0121

Alternate gene names: 187927229

Gene position: 142031-141591 (Counterclockwise)

Preceding gene: 187927230

Following gene: 187927228

Centisome position: 3.6

GC content: 70.52

Gene sequence:

>441_bases
ATGCCTGCTGCACAAACCCAGCCCATCGGCCCGGCCGACGCGTGCCCCTGCGGCAACGGCGCCTATGCGCGTTGCTGCGG
CCCGTTCCACGCGGGCGAGGCCGTGGCGGCTACGGCTGAGCAGCTCATGCGCTCGCGCTACAGCGCTTATGTGCTGGGCG
ACACGGCCTACCTGCGGCGCACGTGGCATCCGTCCACCTGCCCTGTCGACCTGGAAACCAGCGAAGCAGACGCCGCCGCC
ACGCGCTGGCTCGGCCTGGACGTCAGGCGCCACACGCCGCAAGACGCCACGCACGCGACGGTGGAATTCGTCGCACGCTA
CAAGGTGGGCGGCCGCGCGCATCGCCTGCACGAAACCAGCCGCTTCGTCCGCCTGGACGCAAGCGGCGCCGAATCCGCCG
AAGGCCGTTGGCTGTACGTCGACGGCACCTTCCCTGACTGA

Upstream 100 bases:

>100_bases
TGCTGGCGTACGCGGGCCGCAATGCACCAGGCCCGCTGATTGCCGCCGGCGCCACACGCACGTTCACCGATATGCGCGAA
CTGCCGGAGTTGCTGGCCTG

Downstream 100 bases:

>100_bases
ACCGCACCGACCTTCCCGCACTGCTGCCATGCCGACGCTAGAGACCAAGCTGAACCCCCGCGCTGAAGACTTCAAGGCCA
ACGCCGATGCCATGCGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MPAAQTQPIGPADACPCGNGAYARCCGPFHAGEAVAATAEQLMRSRYSAYVLGDTAYLRRTWHPSTCPVDLETSEADAAA
TRWLGLDVRRHTPQDATHATVEFVARYKVGGRAHRLHETSRFVRLDASGAESAEGRWLYVDGTFPD

Sequences:

>Translated_146_residues
MPAAQTQPIGPADACPCGNGAYARCCGPFHAGEAVAATAEQLMRSRYSAYVLGDTAYLRRTWHPSTCPVDLETSEADAAA
TRWLGLDVRRHTPQDATHATVEFVARYKVGGRAHRLHETSRFVRLDASGAESAEGRWLYVDGTFPD
>Mature_145_residues
PAAQTQPIGPADACPCGNGAYARCCGPFHAGEAVAATAEQLMRSRYSAYVLGDTAYLRRTWHPSTCPVDLETSEADAAAT
RWLGLDVRRHTPQDATHATVEFVARYKVGGRAHRLHETSRFVRLDASGAESAEGRWLYVDGTFPD

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=138, Percent_Identity=43.4782608695652, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023006 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15867; Mature: 15736

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAQTQPIGPADACPCGNGAYARCCGPFHAGEAVAATAEQLMRSRYSAYVLGDTAYLRR
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHEEE
TWHPSTCPVDLETSEADAAATRWLGLDVRRHTPQDATHATVEFVARYKVGGRAHRLHETS
CCCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCC
RFVRLDASGAESAEGRWLYVDGTFPD
EEEEEECCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
PAAQTQPIGPADACPCGNGAYARCCGPFHAGEAVAATAEQLMRSRYSAYVLGDTAYLRR
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHEEE
TWHPSTCPVDLETSEADAAATRWLGLDVRRHTPQDATHATVEFVARYKVGGRAHRLHETS
CCCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCC
RFVRLDASGAESAEGRWLYVDGTFPD
EEEEEECCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]