Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is yieH [H]
Identifier: 187927230
GI number: 187927230
Start: 142031
End: 142720
Strand: Reverse
Name: yieH [H]
Synonym: Rpic_0122
Alternate gene names: 187927230
Gene position: 142720-142031 (Counterclockwise)
Preceding gene: 187927231
Following gene: 187927229
Centisome position: 3.62
GC content: 64.78
Gene sequence:
>690_bases ATGACTGCAGTGACCTCCTCTGTTTCGAACCACCCGCGCTTTGACGCGATCCTCTTCGATTGCGACGGCGTGCTGGTCGA CAGCGAACCCATCGTCAACCGTTTGATCTGGGAGATGCTGATCGAGCTTGGCATCGACATCAGCCTGGAAGATTCCATCC AGCGTTTCCTCGGCAAGGCCATCCGCGAAGAGCTGGATGCGATTGCCGAGATGCGCGGCGCACCGCTGCCGCCGAACTGG TTGTCCACCTTCCAGGCGCGACGCAACGTGCTGCTCGAAGCCGAAGTGGAAGCCGTGCCGCATATCGGGCACGCCATCGA TGTGCTCTCCAGGCTCGGCCTGCCGATGGCCGTGGCTTCCGGAGCGGACCGCATGAAGGTGGAGCTGCAACTCAACCGCA CCGGTCTGATCGAGCATTTCCAGCCGACGGACGTACGCATCTTTTCGGCCACCGAAGTCGCGCGCAGCAAGCCCGCGCCC GACGTGTATCTGCTCGCCGCCAGCAGCCTCGGGGTATCGCCCTCGCGCTGCCTGGTGATCGAAGACAGCCCCACGGGCGT TACCGCCGGGCACGCAGCCGGCATGACGGTGCTGGCGTACGCGGGCCGCAATGCACCAGGCCCGCTGATTGCCGCCGGCG CCACACGCACGTTCACCGATATGCGCGAACTGCCGGAGTTGCTGGCCTGA
Upstream 100 bases:
>100_bases CCAGATTGAAGCGTTGCTGCGCGACGGACGGATATAAGGCCACATCCACAACGGCGGCAGATGCACGAACCGCCGCCAAC GAACCAACAACGAAGAGCGC
Downstream 100 bases:
>100_bases TGCCTGCTGCACAAACCCAGCCCATCGGCCCGGCCGACGCGTGCCCCTGCGGCAACGGCGCCTATGCGCGTTGCTGCGGC CCGTTCCACGCGGGCGAGGC
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTAVTSSVSNHPRFDAILFDCDGVLVDSEPIVNRLIWEMLIELGIDISLEDSIQRFLGKAIREELDAIAEMRGAPLPPNW LSTFQARRNVLLEAEVEAVPHIGHAIDVLSRLGLPMAVASGADRMKVELQLNRTGLIEHFQPTDVRIFSATEVARSKPAP DVYLLAASSLGVSPSRCLVIEDSPTGVTAGHAAGMTVLAYAGRNAPGPLIAAGATRTFTDMRELPELLA
Sequences:
>Translated_229_residues MTAVTSSVSNHPRFDAILFDCDGVLVDSEPIVNRLIWEMLIELGIDISLEDSIQRFLGKAIREELDAIAEMRGAPLPPNW LSTFQARRNVLLEAEVEAVPHIGHAIDVLSRLGLPMAVASGADRMKVELQLNRTGLIEHFQPTDVRIFSATEVARSKPAP DVYLLAASSLGVSPSRCLVIEDSPTGVTAGHAAGMTVLAYAGRNAPGPLIAAGATRTFTDMRELPELLA >Mature_228_residues TAVTSSVSNHPRFDAILFDCDGVLVDSEPIVNRLIWEMLIELGIDISLEDSIQRFLGKAIREELDAIAEMRGAPLPPNWL STFQARRNVLLEAEVEAVPHIGHAIDVLSRLGLPMAVASGADRMKVELQLNRTGLIEHFQPTDVRIFSATEVARSKPAPD VYLLAASSLGVSPSRCLVIEDSPTGVTAGHAAGMTVLAYAGRNAPGPLIAAGATRTFTDMRELPELLA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=216, Percent_Identity=31.0185185185185, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1789046, Length=189, Percent_Identity=32.8042328042328, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788021, Length=215, Percent_Identity=31.1627906976744, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI87082080, Length=207, Percent_Identity=31.8840579710145, Blast_Score=61, Evalue=7e-11, Organism=Drosophila melanogaster, GI45550911, Length=209, Percent_Identity=30.1435406698565, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI20129151, Length=219, Percent_Identity=28.7671232876712, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI116008157, Length=193, Percent_Identity=32.6424870466321, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17137324, Length=190, Percent_Identity=32.6315789473684, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24647; Mature: 24515
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVTSSVSNHPRFDAILFDCDGVLVDSEPIVNRLIWEMLIELGIDISLEDSIQRFLGKA CCCCCCCCCCCCCEEEEEEECCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IREELDAIAEMRGAPLPPNWLSTFQARRNVLLEAEVEAVPHIGHAIDVLSRLGLPMAVAS HHHHHHHHHHHCCCCCCHHHHHHHHHHHCEEEEEHHHHCCCCHHHHHHHHHCCCCEEECC GADRMKVELQLNRTGLIEHFQPTDVRIFSATEVARSKPAPDVYLLAASSLGVSPSRCLVI CCCEEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHCCCCCCEEEEEECCCCCCCCEEEEE EDSPTGVTAGHAAGMTVLAYAGRNAPGPLIAAGATRTFTDMRELPELLA ECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHC >Mature Secondary Structure TAVTSSVSNHPRFDAILFDCDGVLVDSEPIVNRLIWEMLIELGIDISLEDSIQRFLGKA CCCCCCCCCCCCEEEEEEECCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IREELDAIAEMRGAPLPPNWLSTFQARRNVLLEAEVEAVPHIGHAIDVLSRLGLPMAVAS HHHHHHHHHHHCCCCCCHHHHHHHHHHHCEEEEEHHHHCCCCHHHHHHHHHCCCCEEECC GADRMKVELQLNRTGLIEHFQPTDVRIFSATEVARSKPAPDVYLLAASSLGVSPSRCLVI CCCEEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHCCCCCCEEEEEECCCCCCCCEEEEE EDSPTGVTAGHAAGMTVLAYAGRNAPGPLIAAGATRTFTDMRELPELLA ECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]