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The map label for this gene is ldcA [C]

Identifier: 187935153

GI number: 187935153

Start: 2603375

End: 2604235

Strand: Reverse

Name: ldcA [C]

Synonym: CLL_A2507

Alternate gene names: 187935153

Gene position: 2604235-2603375 (Counterclockwise)

Preceding gene: 187934085

Following gene: 187933734

Centisome position: 68.53

GC content: 24.85

Gene sequence:

>861_bases
ATGAAATTACTAAATAAAGGTGATAAAGTTGGAATTATAGCGTGTTCTAATGGGGTTGATAAAAGCATGGAATTAAAGAT
GAATGAACTGAAAAGAACTTTGAATTTTATTGGTTTAAATGTTATTTTTTCTAATACAATATATAAAAAATATTCTGTAT
TTAATGGAAGTGGAAAAGAAAGAGCTAATGAACTTATGAAATTGTTTGAAGATAGAAGTATAAAAGCTATTTTTGATATT
TCAGGTGGAGATTTAGCTAATGGGATTTTAGAATATTTAGATTTTGACACTATAAAGAAAAATCCTAAATTATTTTTTGG
TTATAGTGATTTATCAGTAGTTATAAATGCATTATATACTAAAAGTCATATAAAAACGTATCTTTATCAAATAAGAAATC
TAATTGGAGATAATTCTGAAATTCAAATTAAGAACTTTAAAGAAACATTTATGGAAGATAAGAATAGTCTTTTTGATTTT
AAATATGAATGGATACAAGGAAAATCTATTGATGGAATAGTAGTAGGTGGAAATATACGTTGTTTTTTAAAACTTGCTGG
AACAGAATATATGCCTAAATTTAAAGACAAAATTTTGTTGTTAGAGAGTTTCAGTGGTGATGTGGCAAAGATGACTACAT
ATTTAACTCATTATAAGCAATTAGGAGTGTTTAAAGAGATAAAAGGGATAATATTAGGCAATTTTACAGAGATGGAAAAT
AATCAATATAGTCCTAGTATAATTGAATTGATAAAAGAAATAGTAAATGATAAAAATATGCCTATAGTAAAAACAAGTGA
AATTGGTCATGGCTCAGACTCAAAATGTGTTATTATAGGAAAGAATATAGAATTAAAATAA

Upstream 100 bases:

>100_bases
AATACAATTACACTTTGATTTTATCTACTATATATTAATAATACATCAAAAATAAAGGTTAAGTAAGAGACATAATTAAA
AATAGCAAAAGGAGAATTTT

Downstream 100 bases:

>100_bases
ATGTTTGACAATTAAAAAATAAAAGAGTATTATATAAACAATTTAATATAAAAATTCTTTGAAGGAAAGAGTAAGCAATA
TCTTAGTATGTATAGCGAGT

Product: LD-carboxypeptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKLLNKGDKVGIIACSNGVDKSMELKMNELKRTLNFIGLNVIFSNTIYKKYSVFNGSGKERANELMKLFEDRSIKAIFDI
SGGDLANGILEYLDFDTIKKNPKLFFGYSDLSVVINALYTKSHIKTYLYQIRNLIGDNSEIQIKNFKETFMEDKNSLFDF
KYEWIQGKSIDGIVVGGNIRCFLKLAGTEYMPKFKDKILLLESFSGDVAKMTTYLTHYKQLGVFKEIKGIILGNFTEMEN
NQYSPSIIELIKEIVNDKNMPIVKTSEIGHGSDSKCVIIGKNIELK

Sequences:

>Translated_286_residues
MKLLNKGDKVGIIACSNGVDKSMELKMNELKRTLNFIGLNVIFSNTIYKKYSVFNGSGKERANELMKLFEDRSIKAIFDI
SGGDLANGILEYLDFDTIKKNPKLFFGYSDLSVVINALYTKSHIKTYLYQIRNLIGDNSEIQIKNFKETFMEDKNSLFDF
KYEWIQGKSIDGIVVGGNIRCFLKLAGTEYMPKFKDKILLLESFSGDVAKMTTYLTHYKQLGVFKEIKGIILGNFTEMEN
NQYSPSIIELIKEIVNDKNMPIVKTSEIGHGSDSKCVIIGKNIELK
>Mature_286_residues
MKLLNKGDKVGIIACSNGVDKSMELKMNELKRTLNFIGLNVIFSNTIYKKYSVFNGSGKERANELMKLFEDRSIKAIFDI
SGGDLANGILEYLDFDTIKKNPKLFFGYSDLSVVINALYTKSHIKTYLYQIRNLIGDNSEIQIKNFKETFMEDKNSLFDF
KYEWIQGKSIDGIVVGGNIRCFLKLAGTEYMPKFKDKILLLESFSGDVAKMTTYLTHYKQLGVFKEIKGIILGNFTEMEN
NQYSPSIIELIKEIVNDKNMPIVKTSEIGHGSDSKCVIIGKNIELK

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=251, Percent_Identity=23.5059760956175, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32510; Mature: 32510

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLNKGDKVGIIACSNGVDKSMELKMNELKRTLNFIGLNVIFSNTIYKKYSVFNGSGKE
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCHHHEEEEEECCCCHH
RANELMKLFEDRSIKAIFDISGGDLANGILEYLDFDTIKKNPKLFFGYSDLSVVINALYT
HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCHHHHCCCCCEEEECCHHHHHHHHHHH
KSHIKTYLYQIRNLIGDNSEIQIKNFKETFMEDKNSLFDFKYEWIQGKSIDGIVVGGNIR
HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCEE
CFLKLAGTEYMPKFKDKILLLESFSGDVAKMTTYLTHYKQLGVFKEIKGIILGNFTEMEN
EEEEECCCCCCCCHHCEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHCHHEEECEECCCC
NQYSPSIIELIKEIVNDKNMPIVKTSEIGHGSDSKCVIIGKNIELK
CCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCEECC
>Mature Secondary Structure
MKLLNKGDKVGIIACSNGVDKSMELKMNELKRTLNFIGLNVIFSNTIYKKYSVFNGSGKE
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCHHHEEEEEECCCCHH
RANELMKLFEDRSIKAIFDISGGDLANGILEYLDFDTIKKNPKLFFGYSDLSVVINALYT
HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCHHHHCCCCCEEEECCHHHHHHHHHHH
KSHIKTYLYQIRNLIGDNSEIQIKNFKETFMEDKNSLFDFKYEWIQGKSIDGIVVGGNIR
HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCEE
CFLKLAGTEYMPKFKDKILLLESFSGDVAKMTTYLTHYKQLGVFKEIKGIILGNFTEMEN
EEEEECCCCCCCCHHCEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHCHHEEECEECCCC
NQYSPSIIELIKEIVNDKNMPIVKTSEIGHGSDSKCVIIGKNIELK
CCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]