| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934897
Identifier: 187934897
GI number: 187934897
Start: 3396468
End: 3396953
Strand: Reverse
Name: 187934897
Synonym: CLL_A3244
Alternate gene names: NA
Gene position: 3396953-3396468 (Counterclockwise)
Preceding gene: 187933682
Following gene: 187935545
Centisome position: 89.39
GC content: 22.63
Gene sequence:
>486_bases ATGACAAAAGAGATAAATCAAAAAAATGTTATAATATTATTTGTATTATTTGCATTATTAGGTAGTATATTTTCACTAAG TATTTACTATGATTACTATTCTACAGACAAGATTGATATAAGTGGATTTACTAGTGAACATATGTTATTTAGTATTGATT CAATTGATGATAATGCAGGTAATGAAATGATTACAATAAAGGGATGGGCAGCTAAAAAAAATGAAGACTTAAAGATTGTT AAAACATATGTTGCACTTAAAAATATAAAAACTTCAGAGGTATTAAGAATAAATACAATAAAAGAAGAACGACCGGATGT TACTTCTTATTACAATAATGAAAGTAATTATAATCATAGTGGATTTATTAGTGTATTTAATAAAAATTCAATTAAAAAAA GTGGGAAATATGAAGTCTGTATACTTTATTTAAGTGATAATAATAAAAAATTCATATCTACAGGAAAGTATTTAGAAATA GATTAA
Upstream 100 bases:
>100_bases AATACAACAGAGAAGAAACAAAAAGATTTGTTAATGTATATAGGTATTGTTTCGGCAATTAGCTATTTACAATTATTAGT TATGCTTTAAGGAGAAGATT
Downstream 100 bases:
>100_bases ATAAGATAAATTTAAATAGTTTCCTAGTTTGAAATTATAAAGGATGAGGAATAATGATAAATTTTAATGAACCTCCTTTC ACAGGAAAGGAATTAGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTKEINQKNVIILFVLFALLGSIFSLSIYYDYYSTDKIDISGFTSEHMLFSIDSIDDNAGNEMITIKGWAAKKNEDLKIV KTYVALKNIKTSEVLRINTIKEERPDVTSYYNNESNYNHSGFISVFNKNSIKKSGKYEVCILYLSDNNKKFISTGKYLEI D
Sequences:
>Translated_161_residues MTKEINQKNVIILFVLFALLGSIFSLSIYYDYYSTDKIDISGFTSEHMLFSIDSIDDNAGNEMITIKGWAAKKNEDLKIV KTYVALKNIKTSEVLRINTIKEERPDVTSYYNNESNYNHSGFISVFNKNSIKKSGKYEVCILYLSDNNKKFISTGKYLEI D >Mature_160_residues TKEINQKNVIILFVLFALLGSIFSLSIYYDYYSTDKIDISGFTSEHMLFSIDSIDDNAGNEMITIKGWAAKKNEDLKIVK TYVALKNIKTSEVLRINTIKEERPDVTSYYNNESNYNHSGFISVFNKNSIKKSGKYEVCILYLSDNNKKFISTGKYLEID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18505; Mature: 18374
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEINQKNVIILFVLFALLGSIFSLSIYYDYYSTDKIDISGFTSEHMLFSIDSIDDNAG CCCCCCCCCEEHHHHHHHHHHHHHEEEEEEEEECCCEEEECCCCCCCEEEEEECCCCCCC NEMITIKGWAAKKNEDLKIVKTYVALKNIKTSEVLRINTIKEERPDVTSYYNNESNYNHS CEEEEEEECCCCCCCCHHEEEEEHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCC GFISVFNKNSIKKSGKYEVCILYLSDNNKKFISTGKYLEID CEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCEEEEC >Mature Secondary Structure TKEINQKNVIILFVLFALLGSIFSLSIYYDYYSTDKIDISGFTSEHMLFSIDSIDDNAG CCCCCCCCEEHHHHHHHHHHHHHEEEEEEEEECCCEEEECCCCCCCEEEEEECCCCCCC NEMITIKGWAAKKNEDLKIVKTYVALKNIKTSEVLRINTIKEERPDVTSYYNNESNYNHS CEEEEEEECCCCCCCCHHEEEEEHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCC GFISVFNKNSIKKSGKYEVCILYLSDNNKKFISTGKYLEID CEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA