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The map label for this gene is yitL [H]

Identifier: 187934558

GI number: 187934558

Start: 2653648

End: 2654484

Strand: Reverse

Name: yitL [H]

Synonym: CLL_A2546

Alternate gene names: 187934558

Gene position: 2654484-2653648 (Counterclockwise)

Preceding gene: 187935576

Following gene: 187934430

Centisome position: 69.85

GC content: 27.48

Gene sequence:

>837_bases
ATGATACTAATAGGTGAATATAATAATTTTAAGGTAAGTAAAAAAGTTGATTTTGGATATTATTTAGAAAATGAGATGGG
TGAAGAGGTATTATTACCTAATTCATCTTTAAATGAAAAGAAAATAGAAGTTGGCGATAAAGTAGAAGCTTTTGTTTATA
GAGATTCAAAAGATAGAGTGATATCAACATTAAAAACTCCAAGTTTAACAGTTGGAAAAGTAGGCTACTTAGAAGTAGTT
GGTCAAAGTGGTATAGGGGCATTTGCAGATTTTGGTCTTGAAAGAGATGCATTTGTACCAATTAAAGAGCAAATATATAA
ATTAAAAACAGGAGAAAAGTATTTATTTTATATGTACTTAGATAAAACGGATAGAATAGCTCTTACAACTAGAGTTGATA
ACTATTTAGAATTTGCATCACCTGAAGAATTTAAAACTTCAGATGAAGTAGAAGCAATAGTGTATGAAAGTGGTTATAAT
GGAACTTTAAAAGTTGCAATAAATAGAAAATACAAAGGAATACTATTAGGAAATGAGCATTTTGACTATTTATATCCAGG
TCAAGCAGTAAATGCAAGAGTTAAGAGAATATATGAAGATGGAGTAATTGGTATTACAACAAGAAAAACAAGATTAAATG
AAAGAGATGTATTATCAAAAGATATACTTCAATATTTAAGAGAAAATGGAGGATTTATGCCATTCAATGATAAATCTTCT
CCAGAAGATATAAAAAGAACATTTAATACTAGTAAGAATTATTTTAAAATAGCACTTGGTGGATTAATGAAACAAAGGTT
AATAGCTCAAGACAAAGAAGGAACAAGATTATTATAA

Upstream 100 bases:

>100_bases
AGGAAGAAATTCAAGCTAACAAAGAAAGTTCTTTAACTTATGTTAATTTAGCTAAGAAAATGGCAGACAGTAATTAATAA
GGTAATAAATTGGAGGAAAT

Downstream 100 bases:

>100_bases
TAAATATTAAAATTATATTTTAAAGATATGATTATTACATAAGATTTTATATAAAAAGATATGCCATTTAATTAATAGCA
TATCTTTTTATAGTTATTTC

Product: S1 RNA binding domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MILIGEYNNFKVSKKVDFGYYLENEMGEEVLLPNSSLNEKKIEVGDKVEAFVYRDSKDRVISTLKTPSLTVGKVGYLEVV
GQSGIGAFADFGLERDAFVPIKEQIYKLKTGEKYLFYMYLDKTDRIALTTRVDNYLEFASPEEFKTSDEVEAIVYESGYN
GTLKVAINRKYKGILLGNEHFDYLYPGQAVNARVKRIYEDGVIGITTRKTRLNERDVLSKDILQYLRENGGFMPFNDKSS
PEDIKRTFNTSKNYFKIALGGLMKQRLIAQDKEGTRLL

Sequences:

>Translated_278_residues
MILIGEYNNFKVSKKVDFGYYLENEMGEEVLLPNSSLNEKKIEVGDKVEAFVYRDSKDRVISTLKTPSLTVGKVGYLEVV
GQSGIGAFADFGLERDAFVPIKEQIYKLKTGEKYLFYMYLDKTDRIALTTRVDNYLEFASPEEFKTSDEVEAIVYESGYN
GTLKVAINRKYKGILLGNEHFDYLYPGQAVNARVKRIYEDGVIGITTRKTRLNERDVLSKDILQYLRENGGFMPFNDKSS
PEDIKRTFNTSKNYFKIALGGLMKQRLIAQDKEGTRLL
>Mature_278_residues
MILIGEYNNFKVSKKVDFGYYLENEMGEEVLLPNSSLNEKKIEVGDKVEAFVYRDSKDRVISTLKTPSLTVGKVGYLEVV
GQSGIGAFADFGLERDAFVPIKEQIYKLKTGEKYLFYMYLDKTDRIALTTRVDNYLEFASPEEFKTSDEVEAIVYESGYN
GTLKVAINRKYKGILLGNEHFDYLYPGQAVNARVKRIYEDGVIGITTRKTRLNERDVLSKDILQYLRENGGFMPFNDKSS
PEDIKRTFNTSKNYFKIALGGLMKQRLIAQDKEGTRLL

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31804; Mature: 31804

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIGEYNNFKVSKKVDFGYYLENEMGEEVLLPNSSLNEKKIEVGDKVEAFVYRDSKDRV
CEEEECCCCEEEEEECCCCEEECCCCCCEEECCCCCCCCCEECCCCCEEEEEEECCCHHH
ISTLKTPSLTVGKVGYLEVVGQSGIGAFADFGLERDAFVPIKEQIYKLKTGEKYLFYMYL
HHHHCCCCEEECCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHEEECCCCEEEEEEEE
DKTDRIALTTRVDNYLEFASPEEFKTSDEVEAIVYESGYNGTLKVAINRKYKGILLGNEH
CCCCCEEEEEEHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEEECCCC
FDYLYPGQAVNARVKRIYEDGVIGITTRKTRLNERDVLSKDILQYLRENGGFMPFNDKSS
CCEECCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PEDIKRTFNTSKNYFKIALGGLMKQRLIAQDKEGTRLL
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MILIGEYNNFKVSKKVDFGYYLENEMGEEVLLPNSSLNEKKIEVGDKVEAFVYRDSKDRV
CEEEECCCCEEEEEECCCCEEECCCCCCEEECCCCCCCCCEECCCCCEEEEEEECCCHHH
ISTLKTPSLTVGKVGYLEVVGQSGIGAFADFGLERDAFVPIKEQIYKLKTGEKYLFYMYL
HHHHCCCCEEECCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHEEECCCCEEEEEEEE
DKTDRIALTTRVDNYLEFASPEEFKTSDEVEAIVYESGYNGTLKVAINRKYKGILLGNEH
CCCCCEEEEEEHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEEECCCC
FDYLYPGQAVNARVKRIYEDGVIGITTRKTRLNERDVLSKDILQYLRENGGFMPFNDKSS
CCEECCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PEDIKRTFNTSKNYFKIALGGLMKQRLIAQDKEGTRLL
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]