| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is asnB [H]
Identifier: 187934430
GI number: 187934430
Start: 2650024
End: 2651868
Strand: Reverse
Name: asnB [H]
Synonym: CLL_A2544
Alternate gene names: 187934430
Gene position: 2651868-2650024 (Counterclockwise)
Preceding gene: 187934558
Following gene: 187932439
Centisome position: 69.78
GC content: 28.08
Gene sequence:
>1845_bases ATGTGTGGTATTGCTGGATTAGTAAATTTTAAAGAAGACATATCAAAATATAAAAATATATTAGAGGATATGGTAAAAAC ATTAAAAAAAAGAGGCCCAGATAGTCAAGGATATTATGTTGATAAAAATGTTCTGTTAGGTCATAGAAGATTAATAGTTG TAGATCCGGATGGTGGTAAACAGCCGATGATTAAGATATTTGAAGGCAATAAATATGTTTTAATTTATAATGGGGAGTTA TATAATACGGAAGAATTAAGAAAAGAATTAAAGAACGAAGGATTTTATTTTGATTCATATTCAGATACAGAAGTATTAAT TACATCATATATACGTTGGGGGAAAAATTGTATTAATAAATTAAATGGAATATTTGCTTTTGCTATTTTTGATGAAAAAA ATAATGAAGTTTTTTTAGCTAGAGACCAAATGGGAGTAAAACCATTATTTTATACAGTATATAATGAAACTTTAATATTT GGATCAGAAATAAAAACAATTTTAGCAAATTCAAATATAAAAAGAGAAATAAATGAAGATGGATTAACAGAATTATTTGC ATTAGGACCAGCTGTAACTCCAGGAAAAGCTATATTTAAGGATATAAAAGAGATAGCACCTGCTAATTGCTTATTGATTT CAAAAACTGGAGATATAAAAACATGGGAATATTGGAGCGTTGAGGCAAAAGAGTTTAAAGAAACATCAGCTGAAGCTATA GATCATACTAGATATTTGTTAGTGGATGCAATAAAAAGACAATTGGTAGGGGATGTACCAATATGCACATTTCTTTCTGG AGGGCTAGATTCTTCTGCAATTTCTGCAATAGCAGCACAAGAATATAGTAAGAAAGGAAAAACATTAACTACGTATTCTA TAGATTATGAAGATAATTCTAAATATTTTAAGTCATCTTTATTTCAACCGACTACTGATGAATATTGGGCAGAGATTATG GCAAAAGACATAGGAAGCGATCATAAAAAAATTACATTAAACCATGAAGATCTAGCAAATGCTTTAAAAGATGCAGTTAT AGCTAGAGATTTACCAGGAATGGCAGATATAGATTCATCATTATTATTGTTTTGTAAAGAAATTCGTAAAGATTTTGTGG TAGGTCTTTCAGGGGAATGTGCAGATGAAATATTTGCAGGGTATCCATGGTTTACAAACAAAGAGATGTTTTATATGGAT ACTTTCCCATGGTCAAGATTTATTAATGATAGAAAATCTATAATTAATAATAAGTTAAAAAATATAAGAATAGAAGATAG AGTGAGATATGAATATGAAAAATCATTAAGTAAGGTTCCGCATTTAGAGAATGAAAGTAAAAGAGACTATAGGATGAGAG AAGTATCATATTTAAATTTAAAATGGTTTATGGTTAATCTACTAAACAGAAAAGATAGAGTAAGTATGTATAATGGTTTA GAAGTTAGAGTTCCTTTTGCAGATATTAGATTAGTAAATTATGCATTTAATTTACCAGCAGAGATCAAATTATACAAAGG AAGAGAAAAAGGATTATTAAGAGCGGCTTTAGAAGGTATTCTTCCAAATGAAATTATTTATAGAAAAAAGAGTCCATATC CTAAAACTCATAATCCTATATATACAGATATAGTTTGTAATATGATGAATGATATATTGAAGAAAAAAGCATCACCTATT CATGAAATTATTGATGAAGATACAGTAAGAAAAATTGTTGATACAAGAGGAGAAGCGTATAAATCACCTTGGTATGGTCA ACTTATGACAGGTCCTCAGTTAATAGCGTATTTGATTCAGATAAATACTTGGTTAGAAGAATATAATATAAATATATTAA TTTAA
Upstream 100 bases:
>100_bases ATCTTGCACAAAAAAAATATATTAATCATATTTTATAATGCAAAGTGTTAAAAATATAAAATATAAAGTATGAATTAGAT TTAAATGGGAGATGAACATT
Downstream 100 bases:
>100_bases GGCTCTGTTTTAAATATATATATTTAAATGTTACTCTAATATAGTCTAATTTAAAAATAAAAAATGATTACCAAATAATA AATTAGTAATCATTTTTTAT
Product: asparagine synthase (glutamine-hydrolyzing)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MCGIAGLVNFKEDISKYKNILEDMVKTLKKRGPDSQGYYVDKNVLLGHRRLIVVDPDGGKQPMIKIFEGNKYVLIYNGEL YNTEELRKELKNEGFYFDSYSDTEVLITSYIRWGKNCINKLNGIFAFAIFDEKNNEVFLARDQMGVKPLFYTVYNETLIF GSEIKTILANSNIKREINEDGLTELFALGPAVTPGKAIFKDIKEIAPANCLLISKTGDIKTWEYWSVEAKEFKETSAEAI DHTRYLLVDAIKRQLVGDVPICTFLSGGLDSSAISAIAAQEYSKKGKTLTTYSIDYEDNSKYFKSSLFQPTTDEYWAEIM AKDIGSDHKKITLNHEDLANALKDAVIARDLPGMADIDSSLLLFCKEIRKDFVVGLSGECADEIFAGYPWFTNKEMFYMD TFPWSRFINDRKSIINNKLKNIRIEDRVRYEYEKSLSKVPHLENESKRDYRMREVSYLNLKWFMVNLLNRKDRVSMYNGL EVRVPFADIRLVNYAFNLPAEIKLYKGREKGLLRAALEGILPNEIIYRKKSPYPKTHNPIYTDIVCNMMNDILKKKASPI HEIIDEDTVRKIVDTRGEAYKSPWYGQLMTGPQLIAYLIQINTWLEEYNINILI
Sequences:
>Translated_614_residues MCGIAGLVNFKEDISKYKNILEDMVKTLKKRGPDSQGYYVDKNVLLGHRRLIVVDPDGGKQPMIKIFEGNKYVLIYNGEL YNTEELRKELKNEGFYFDSYSDTEVLITSYIRWGKNCINKLNGIFAFAIFDEKNNEVFLARDQMGVKPLFYTVYNETLIF GSEIKTILANSNIKREINEDGLTELFALGPAVTPGKAIFKDIKEIAPANCLLISKTGDIKTWEYWSVEAKEFKETSAEAI DHTRYLLVDAIKRQLVGDVPICTFLSGGLDSSAISAIAAQEYSKKGKTLTTYSIDYEDNSKYFKSSLFQPTTDEYWAEIM AKDIGSDHKKITLNHEDLANALKDAVIARDLPGMADIDSSLLLFCKEIRKDFVVGLSGECADEIFAGYPWFTNKEMFYMD TFPWSRFINDRKSIINNKLKNIRIEDRVRYEYEKSLSKVPHLENESKRDYRMREVSYLNLKWFMVNLLNRKDRVSMYNGL EVRVPFADIRLVNYAFNLPAEIKLYKGREKGLLRAALEGILPNEIIYRKKSPYPKTHNPIYTDIVCNMMNDILKKKASPI HEIIDEDTVRKIVDTRGEAYKSPWYGQLMTGPQLIAYLIQINTWLEEYNINILI >Mature_614_residues MCGIAGLVNFKEDISKYKNILEDMVKTLKKRGPDSQGYYVDKNVLLGHRRLIVVDPDGGKQPMIKIFEGNKYVLIYNGEL YNTEELRKELKNEGFYFDSYSDTEVLITSYIRWGKNCINKLNGIFAFAIFDEKNNEVFLARDQMGVKPLFYTVYNETLIF GSEIKTILANSNIKREINEDGLTELFALGPAVTPGKAIFKDIKEIAPANCLLISKTGDIKTWEYWSVEAKEFKETSAEAI DHTRYLLVDAIKRQLVGDVPICTFLSGGLDSSAISAIAAQEYSKKGKTLTTYSIDYEDNSKYFKSSLFQPTTDEYWAEIM AKDIGSDHKKITLNHEDLANALKDAVIARDLPGMADIDSSLLLFCKEIRKDFVVGLSGECADEIFAGYPWFTNKEMFYMD TFPWSRFINDRKSIINNKLKNIRIEDRVRYEYEKSLSKVPHLENESKRDYRMREVSYLNLKWFMVNLLNRKDRVSMYNGL EVRVPFADIRLVNYAFNLPAEIKLYKGREKGLLRAALEGILPNEIIYRKKSPYPKTHNPIYTDIVCNMMNDILKKKASPI HEIIDEDTVRKIVDTRGEAYKSPWYGQLMTGPQLIAYLIQINTWLEEYNINILI
Specific function: Asparagine synthetase involved in sporulation [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Homo sapiens, GI168229248, Length=409, Percent_Identity=29.5843520782396, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI168229252, Length=409, Percent_Identity=29.5843520782396, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI168229250, Length=409, Percent_Identity=29.5843520782396, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI296010848, Length=382, Percent_Identity=29.3193717277487, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI296010852, Length=309, Percent_Identity=28.1553398058252, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI296010850, Length=309, Percent_Identity=28.1553398058252, Blast_Score=96, Evalue=1e-19, Organism=Escherichia coli, GI1786889, Length=399, Percent_Identity=29.0726817042606, Blast_Score=151, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17560178, Length=604, Percent_Identity=28.1456953642384, Blast_Score=152, Evalue=7e-37, Organism=Caenorhabditis elegans, GI25147557, Length=565, Percent_Identity=27.9646017699115, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI71993933, Length=558, Percent_Identity=28.1362007168459, Blast_Score=133, Evalue=3e-31, Organism=Caenorhabditis elegans, GI25147560, Length=340, Percent_Identity=28.8235294117647, Blast_Score=101, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6325403, Length=574, Percent_Identity=26.1324041811847, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6321563, Length=647, Percent_Identity=25.5023183925811, Blast_Score=142, Evalue=1e-34, Organism=Drosophila melanogaster, GI45553209, Length=526, Percent_Identity=27.1863117870722, Blast_Score=157, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 70798; Mature: 70798
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIAGLVNFKEDISKYKNILEDMVKTLKKRGPDSQGYYVDKNVLLGHRRLIVVDPDGGK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCEEEEEECCCCCC QPMIKIFEGNKYVLIYNGELYNTEELRKELKNEGFYFDSYSDTEVLITSYIRWGKNCINK CCEEEEEECCEEEEEECCCEECHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHH LNGIFAFAIFDEKNNEVFLARDQMGVKPLFYTVYNETLIFGSEIKTILANSNIKREINED HCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCEEEECHHHHHHHHCCCCHHHCCCC GLTELFALGPAVTPGKAIFKDIKEIAPANCLLISKTGDIKTWEYWSVEAKEFKETSAEAI HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHH DHTRYLLVDAIKRQLVGDVPICTFLSGGLDSSAISAIAAQEYSKKGKTLTTYSIDYEDNS HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCC KYFKSSLFQPTTDEYWAEIMAKDIGSDHKKITLNHEDLANALKDAVIARDLPGMADIDSS HHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCHH LLLFCKEIRKDFVVGLSGECADEIFAGYPWFTNKEMFYMDTFPWSRFINDRKSIINNKLK HHHHHHHHHHHHEECCCCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH NIRIEDRVRYEYEKSLSKVPHLENESKRDYRMREVSYLNLKWFMVNLLNRKDRVSMYNGL CCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEHHHHHHHHHCCCCHHHHCCCC EVRVPFADIRLVNYAFNLPAEIKLYKGREKGLLRAALEGILPNEIIYRKKSPYPKTHNPI EEEECHHHEEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCHHEECCCCCCCCCCCCC YTDIVCNMMNDILKKKASPIHEIIDEDTVRKIVDTRGEAYKSPWYGQLMTGPQLIAYLIQ HHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHH INTWLEEYNINILI HHHHHHHCCCEEEC >Mature Secondary Structure MCGIAGLVNFKEDISKYKNILEDMVKTLKKRGPDSQGYYVDKNVLLGHRRLIVVDPDGGK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCEEEEEECCCCCC QPMIKIFEGNKYVLIYNGELYNTEELRKELKNEGFYFDSYSDTEVLITSYIRWGKNCINK CCEEEEEECCEEEEEECCCEECHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHH LNGIFAFAIFDEKNNEVFLARDQMGVKPLFYTVYNETLIFGSEIKTILANSNIKREINED HCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCEEEECHHHHHHHHCCCCHHHCCCC GLTELFALGPAVTPGKAIFKDIKEIAPANCLLISKTGDIKTWEYWSVEAKEFKETSAEAI HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHH DHTRYLLVDAIKRQLVGDVPICTFLSGGLDSSAISAIAAQEYSKKGKTLTTYSIDYEDNS HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCC KYFKSSLFQPTTDEYWAEIMAKDIGSDHKKITLNHEDLANALKDAVIARDLPGMADIDSS HHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCHH LLLFCKEIRKDFVVGLSGECADEIFAGYPWFTNKEMFYMDTFPWSRFINDRKSIINNKLK HHHHHHHHHHHHEECCCCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH NIRIEDRVRYEYEKSLSKVPHLENESKRDYRMREVSYLNLKWFMVNLLNRKDRVSMYNGL CCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEHHHHHHHHHCCCCHHHHCCCC EVRVPFADIRLVNYAFNLPAEIKLYKGREKGLLRAALEGILPNEIIYRKKSPYPKTHNPI EEEECHHHEEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCHHEECCCCCCCCCCCCC YTDIVCNMMNDILKKKASPIHEIIDEDTVRKIVDTRGEAYKSPWYGQLMTGPQLIAYLIQ HHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHH INTWLEEYNINILI HHHHHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353931; 9384377; 10498721 [H]