Click here to switch to the map view.

The map label for this gene is yrdA [C]

Identifier: 187935576

GI number: 187935576

Start: 2654508

End: 2655017

Strand: Reverse

Name: yrdA [C]

Synonym: CLL_A2547

Alternate gene names: 187935576

Gene position: 2655017-2654508 (Counterclockwise)

Preceding gene: 187934730

Following gene: 187934558

Centisome position: 69.86

GC content: 30.2

Gene sequence:

>510_bases
ATGGTAAAGAATTTTTCAAATAATAGTCCTAATATATCAGAAAGTGTTTACATATCTGAAACATCTGTTATTATTGGAGA
TGTCGTTATTAAAGAAAATTCTAATATATGGTTTGGTGCTGTACTTAGAGGTGATGAACAATCAATATCTATAGGGCGTG
AAACTAATATACAAGAAAATGTTGTTATTCATGGAGATGGAGATAATAATGTGACTGTAGGAAATGGTGTTACCATTGGT
CATGGTGCTATCATTCATGGATGTGCAATAGGTGATAATGTACTCATTGGTATGGGGGCTATAATATTAAATGGAGCTAA
AATAAGTAAAAATTCTATTGTTGCTGCTGGAAGCTTAATAACTCAAAATAAGGAATTTGAAGATGGATCATTAATACTTG
GAAATCCTGCAAAAGTTATAAGAAAATTAACACAGGAAGAAATTCAAGCTAACAAAGAAAGTTCTTTAACTTATGTTAAT
TTAGCTAAGAAAATGGCAGACAGTAATTAA

Upstream 100 bases:

>100_bases
TTCTGCGGTAAAATAATGACAATAACTAAATGTAATGATAAAATAAGTTTAGGTGTCTTAGCTAAATTTAATTATAAAAA
AGAAGAAAGTGGGAAAAATA

Downstream 100 bases:

>100_bases
TAAGGTAATAAATTGGAGGAAATATGATACTAATAGGTGAATATAATAATTTTAAGGTAAGTAAAAAAGTTGATTTTGGA
TATTATTTAGAAAATGAGAT

Product: ferripyochelin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MVKNFSNNSPNISESVYISETSVIIGDVVIKENSNIWFGAVLRGDEQSISIGRETNIQENVVIHGDGDNNVTVGNGVTIG
HGAIIHGCAIGDNVLIGMGAIILNGAKISKNSIVAAGSLITQNKEFEDGSLILGNPAKVIRKLTQEEIQANKESSLTYVN
LAKKMADSN

Sequences:

>Translated_169_residues
MVKNFSNNSPNISESVYISETSVIIGDVVIKENSNIWFGAVLRGDEQSISIGRETNIQENVVIHGDGDNNVTVGNGVTIG
HGAIIHGCAIGDNVLIGMGAIILNGAKISKNSIVAAGSLITQNKEFEDGSLILGNPAKVIRKLTQEEIQANKESSLTYVN
LAKKMADSN
>Mature_169_residues
MVKNFSNNSPNISESVYISETSVIIGDVVIKENSNIWFGAVLRGDEQSISIGRETNIQENVVIHGDGDNNVTVGNGVTIG
HGAIIHGCAIGDNVLIGMGAIILNGAKISKNSIVAAGSLITQNKEFEDGSLILGNPAKVIRKLTQEEIQANKESSLTYVN
LAKKMADSN

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=176, Percent_Identity=39.2045454545455, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1787667, Length=160, Percent_Identity=36.875, Blast_Score=116, Evalue=6e-28,
Organism=Escherichia coli, GI87081681, Length=160, Percent_Identity=33.75, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 17877; Mature: 17877

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNFSNNSPNISESVYISETSVIIGDVVIKENSNIWFGAVLRGDEQSISIGRETNIQEN
CCCCCCCCCCCCCCEEEEECCEEEEEEEEEEECCCEEEEEEEECCCCEEECCCCCCCCCC
VVIHGDGDNNVTVGNGVTIGHGAIIHGCAIGDNVLIGMGAIILNGAKISKNSIVAAGSLI
EEEECCCCCCEEECCCEEECCCEEEEEEECCCCEEEEECEEEEECCEECCCCEEEECEEE
TQNKEFEDGSLILGNPAKVIRKLTQEEIQANKESSLTYVNLAKKMADSN
ECCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCC
>Mature Secondary Structure
MVKNFSNNSPNISESVYISETSVIIGDVVIKENSNIWFGAVLRGDEQSISIGRETNIQEN
CCCCCCCCCCCCCCEEEEECCEEEEEEEEEEECCCEEEEEEEECCCCEEECCCCCCCCCC
VVIHGDGDNNVTVGNGVTIGHGAIIHGCAIGDNVLIGMGAIILNGAKISKNSIVAAGSLI
EEEECCCCCCEEECCCEEECCCEEEEEEECCCCEEEEECEEEEECCEECCCCEEEECEEE
TQNKEFEDGSLILGNPAKVIRKLTQEEIQANKESSLTYVNLAKKMADSN
ECCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]