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The map label for this gene is gidA [H]

Identifier: 187934034

GI number: 187934034

Start: 3341968

End: 3342834

Strand: Reverse

Name: gidA [H]

Synonym: CLL_A3210

Alternate gene names: 187934034

Gene position: 3342834-3341968 (Counterclockwise)

Preceding gene: 187934202

Following gene: 187932849

Centisome position: 87.96

GC content: 28.84

Gene sequence:

>867_bases
ATGGGAGAGAGATACGATATAGCCATTATTGGAAGTGGACCAGCGGGGTTATCAGCAGCATTAAATGCAAAAATAAGAAA
AAAGAACTTTATAATCTTTGGAAGTAAAGATATTAGTAATAAACTAGTAAAGGCTCATACTATAAATAATTATTTAGGAT
TCTATGGAAAAAGTGGATTGGAAATAAAAGATGAGTTTCTTAATCATTTAAAATCTATGGACATAGAGATTACAGAAGAA
AAGGTAAATAATATTTATGCAATGGGGGATTATTTTTCATTAATGGTAAATGAAAAGATGTATGAAGCAACTTCTATAAT
TTTAGCTACTGGGGTGAACTTTGGAAAGCCATTTAATGGGGAAGAAGAGTTTTTAGGAAAAGGTGTTGGATATTGTGCAA
CTTGTGATGCACCTTTATATAAAAATAAAGTAGTTACTATCATAGCTTATAATAAAAAAGATGAAGAAGAAGTTAATTTT
ATAGCATCAATAGCATCTAAGGTATATTACATACCTATGTATAATGAGGAAGTAGAAGTAAACTCAAATATTGAAATTAT
AAAAGATAAGCCTGTTGAGATAAAAGGAGATATGAAAGTTAATTCTCTAATTTTATCTAATAAGGAATTAAAAACAGATG
GTATTTTTATACTAAGAGATAGCATATCACCTGGTCAATTGGTTCCAGGATTAGAACTAGATCAAAATCATGTTAAGGTT
GATAGATTGATGAAAACAAATATAAAAGGATGTTTTGCAGCTGGAGATATAGTAGGAGTGCCTTATCAATATATTAAATC
AGCAGGAGAAGGAAATATTGCAGCATTATCTGCAGTTTCTTATGTAGATGAAAAAAATAAAAAATAA

Upstream 100 bases:

>100_bases
AAAAAAGCTTTTTATATTACTTAAATGTATTTAAATATTGATTTTTAGTAATAATATATTTTAGATTGATTATTCTTAAT
TAAGATTTGGAGGGAATTTT

Downstream 100 bases:

>100_bases
ATATATTTAAAAACTATGTTAAAGATTATAAATGATTATACTCTATAAGTGAATTTATATATTCAAAAACAAACTGTTAT
AAAAAATAATAAAATAAAGT

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: TRXR [H]

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MGERYDIAIIGSGPAGLSAALNAKIRKKNFIIFGSKDISNKLVKAHTINNYLGFYGKSGLEIKDEFLNHLKSMDIEITEE
KVNNIYAMGDYFSLMVNEKMYEATSIILATGVNFGKPFNGEEEFLGKGVGYCATCDAPLYKNKVVTIIAYNKKDEEEVNF
IASIASKVYYIPMYNEEVEVNSNIEIIKDKPVEIKGDMKVNSLILSNKELKTDGIFILRDSISPGQLVPGLELDQNHVKV
DRLMKTNIKGCFAAGDIVGVPYQYIKSAGEGNIAALSAVSYVDEKNKK

Sequences:

>Translated_288_residues
MGERYDIAIIGSGPAGLSAALNAKIRKKNFIIFGSKDISNKLVKAHTINNYLGFYGKSGLEIKDEFLNHLKSMDIEITEE
KVNNIYAMGDYFSLMVNEKMYEATSIILATGVNFGKPFNGEEEFLGKGVGYCATCDAPLYKNKVVTIIAYNKKDEEEVNF
IASIASKVYYIPMYNEEVEVNSNIEIIKDKPVEIKGDMKVNSLILSNKELKTDGIFILRDSISPGQLVPGLELDQNHVKV
DRLMKTNIKGCFAAGDIVGVPYQYIKSAGEGNIAALSAVSYVDEKNKK
>Mature_287_residues
GERYDIAIIGSGPAGLSAALNAKIRKKNFIIFGSKDISNKLVKAHTINNYLGFYGKSGLEIKDEFLNHLKSMDIEITEEK
VNNIYAMGDYFSLMVNEKMYEATSIILATGVNFGKPFNGEEEFLGKGVGYCATCDAPLYKNKVVTIIAYNKKDEEEVNFI
ASIASKVYYIPMYNEEVEVNSNIEIIKDKPVEIKGDMKVNSLILSNKELKTDGIFILRDSISPGQLVPGLELDQNHVKVD
RLMKTNIKGCFAAGDIVGVPYQYIKSAGEGNIAALSAVSYVDEKNKK

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787114, Length=314, Percent_Identity=29.2993630573248, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081763, Length=206, Percent_Identity=31.5533980582524, Blast_Score=75, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6320560, Length=311, Percent_Identity=29.903536977492, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321898, Length=316, Percent_Identity=29.1139240506329, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR008255
- InterPro:   IPR001327
- InterPro:   IPR000103
- InterPro:   IPR005982 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.8.1.9 [H]

Molecular weight: Translated: 31856; Mature: 31725

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERYDIAIIGSGPAGLSAALNAKIRKKNFIIFGSKDISNKLVKAHTINNYLGFYGKSGL
CCCEEEEEEEECCCCCCHHHHCCEEEECEEEEECCCCCCCCEEEEEEHHHHHHHCCCCCC
EIKDEFLNHLKSMDIEITEEKVNNIYAMGDYFSLMVNEKMYEATSIILATGVNFGKPFNG
EEHHHHHHHHHHCCEEEEHHHHCCEEEECCEEEEEECCHHHHHHEEEEEECCCCCCCCCC
EEEFLGKGVGYCATCDAPLYKNKVVTIIAYNKKDEEEVNFIASIASKVYYIPMYNEEVEV
CHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCEEEEEEECCEEEE
NSNIEIIKDKPVEIKGDMKVNSLILSNKELKTDGIFILRDSISPGQLVPGLELDQNHVKV
CCCEEEEECCCEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHH
DRLMKTNIKGCFAAGDIVGVPYQYIKSAGEGNIAALSAVSYVDEKNKK
HHHHHCCCCEEEECCCEECCCHHHHHCCCCCCEEEHHHHHHHHHCCCC
>Mature Secondary Structure 
GERYDIAIIGSGPAGLSAALNAKIRKKNFIIFGSKDISNKLVKAHTINNYLGFYGKSGL
CCEEEEEEEECCCCCCHHHHCCEEEECEEEEECCCCCCCCEEEEEEHHHHHHHCCCCCC
EIKDEFLNHLKSMDIEITEEKVNNIYAMGDYFSLMVNEKMYEATSIILATGVNFGKPFNG
EEHHHHHHHHHHCCEEEEHHHHCCEEEECCEEEEEECCHHHHHHEEEEEECCCCCCCCCC
EEEFLGKGVGYCATCDAPLYKNKVVTIIAYNKKDEEEVNFIASIASKVYYIPMYNEEVEV
CHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCEEEEEEECCEEEE
NSNIEIIKDKPVEIKGDMKVNSLILSNKELKTDGIFILRDSISPGQLVPGLELDQNHVKV
CCCEEEEECCCEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHH
DRLMKTNIKGCFAAGDIVGVPYQYIKSAGEGNIAALSAVSYVDEKNKK
HHHHHCCCCEEEECCCEECCCHHHHHCCCCCCEEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]