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The map label for this gene is ssb [H]

Identifier: 187933892

GI number: 187933892

Start: 3551393

End: 3551740

Strand: Reverse

Name: ssb [H]

Synonym: CLL_A3368

Alternate gene names: 187933892

Gene position: 3551740-3551393 (Counterclockwise)

Preceding gene: 187935176

Following gene: 187934718

Centisome position: 93.46

GC content: 30.17

Gene sequence:

>348_bases
ATGAATAAAATAGTATTAGTAGGAAATTTTATAAAGGACCCTGAACTTATGTATACCGAAAAAGATAGTAAAACATACAG
CAAATTTATAATAGCTGTAGATAGACCATTTAAAAGTCTAGATGGTACTAGAAAAGCTGATTTAATTCCTATAATAGTAT
GGGGCAAAAAGGCAGAAGTTATATGCCGCTATATGAAAAAAGGAGATAGTATAAGTTTTAGTGGTAGATTAAGAACTGGA
AGTTATGAAGATAAAGACGGAAATAAGAAGTACATAGCAGAAGTTGTTGGCGAAGACTTTAAGTTCTTAGGAAACAAAAG
ACCAGAAAAAGTTATTGCAGAAAATTAA

Upstream 100 bases:

>100_bases
AACAATTTAAGAAGCAGTTATTAGAATAGTTATACTTTAATGAATATAATTACATTATCTGGATAGAATCAATAAAGAAA
TATTCAGGAGGTGTAATATA

Downstream 100 bases:

>100_bases
TAAAATAATATATAGTTTTGATAAAAAGTATTTAAAGAATATTGAAATGAACTCCATTAAATAGATACAGTAAAAAAATA
CTGTTTAAAAATCTATTTGA

Product: single-strand binding protein family

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MNKIVLVGNFIKDPELMYTEKDSKTYSKFIIAVDRPFKSLDGTRKADLIPIIVWGKKAEVICRYMKKGDSISFSGRLRTG
SYEDKDGNKKYIAEVVGEDFKFLGNKRPEKVIAEN

Sequences:

>Translated_115_residues
MNKIVLVGNFIKDPELMYTEKDSKTYSKFIIAVDRPFKSLDGTRKADLIPIIVWGKKAEVICRYMKKGDSISFSGRLRTG
SYEDKDGNKKYIAEVVGEDFKFLGNKRPEKVIAEN
>Mature_115_residues
MNKIVLVGNFIKDPELMYTEKDSKTYSKFIIAVDRPFKSLDGTRKADLIPIIVWGKKAEVICRYMKKGDSISFSGRLRTG
SYEDKDGNKKYIAEVVGEDFKFLGNKRPEKVIAEN

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 13143; Mature: 13143

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIVLVGNFIKDPELMYTEKDSKTYSKFIIAVDRPFKSLDGTRKADLIPIIVWGKKAEV
CCEEEEEECCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHH
ICRYMKKGDSISFSGRLRTGSYEDKDGNKKYIAEVVGEDFKFLGNKRPEKVIAEN
HHHHHHCCCCEEECCEEECCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNKIVLVGNFIKDPELMYTEKDSKTYSKFIIAVDRPFKSLDGTRKADLIPIIVWGKKAEV
CCEEEEEECCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHH
ICRYMKKGDSISFSGRLRTGSYEDKDGNKKYIAEVVGEDFKFLGNKRPEKVIAEN
HHHHHHCCCCEEECCEEECCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12552129 [H]