| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187934718
Identifier: 187934718
GI number: 187934718
Start: 3550408
End: 3550731
Strand: Reverse
Name: 187934718
Synonym: CLL_A3367
Alternate gene names: NA
Gene position: 3550731-3550408 (Counterclockwise)
Preceding gene: 187933892
Following gene: 187935448
Centisome position: 93.43
GC content: 27.16
Gene sequence:
>324_bases ATGGATATTATAGAAGAATATACATCTATTGATACTGAAAACAATTTTGAGTATAAATATAGGCTAACTAAATCACTGTA TAAAGGAATAACAGCATATGGAATAGAAGTACAAAGCCAAAACTCAAATACCACTAACAAGGCATTTAATGAAAAGGATT CAGTAAATTTAATTTCTATAAATAGACACAATGTTAAAACTTTACTTACTAAATTATATGAAAATAGAGTTTCACCACTA CATCTTATAGACATTATTGGCGAGTATGTAGACGAGCATGTATGTGAATTCGATAATTTTACTTCAAAAGAGGTTGCAAA TTAA
Upstream 100 bases:
>100_bases TATAAATAACTAATTATCGGGACATGCTTTGACATTTTATAAAAGATTAATGTGATAATATTAACATGTGTTACAAATTT AAAAGGGGTTGAGTAATTAT
Downstream 100 bases:
>100_bases TTGTTAAATATTACTTAAAGGCTTCATTTAGTATATACTAAATAAAGTGACTTTCTTAGAAAGGGGTAATATTTTGATAA GAGGAATTGGAACAGATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MDIIEEYTSIDTENNFEYKYRLTKSLYKGITAYGIEVQSQNSNTTNKAFNEKDSVNLISINRHNVKTLLTKLYENRVSPL HLIDIIGEYVDEHVCEFDNFTSKEVAN
Sequences:
>Translated_107_residues MDIIEEYTSIDTENNFEYKYRLTKSLYKGITAYGIEVQSQNSNTTNKAFNEKDSVNLISINRHNVKTLLTKLYENRVSPL HLIDIIGEYVDEHVCEFDNFTSKEVAN >Mature_107_residues MDIIEEYTSIDTENNFEYKYRLTKSLYKGITAYGIEVQSQNSNTTNKAFNEKDSVNLISINRHNVKTLLTKLYENRVSPL HLIDIIGEYVDEHVCEFDNFTSKEVAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12444; Mature: 12444
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIIEEYTSIDTENNFEYKYRLTKSLYKGITAYGIEVQSQNSNTTNKAFNEKDSVNLISI CCHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHCEEEECCCCCCCCCCCCCCCCEEEEEE NRHNVKTLLTKLYENRVSPLHLIDIIGEYVDEHVCEFDNFTSKEVAN CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCC >Mature Secondary Structure MDIIEEYTSIDTENNFEYKYRLTKSLYKGITAYGIEVQSQNSNTTNKAFNEKDSVNLISI CCHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHCEEEECCCCCCCCCCCCCCCCEEEEEE NRHNVKTLLTKLYENRVSPLHLIDIIGEYVDEHVCEFDNFTSKEVAN CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA