Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
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Accession | NC_010674 |
Length | 3,800,327 |
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The map label for this gene is resE [H]
Identifier: 187933777
GI number: 187933777
Start: 2749525
End: 2750733
Strand: Reverse
Name: resE [H]
Synonym: CLL_A2639
Alternate gene names: 187933777
Gene position: 2750733-2749525 (Counterclockwise)
Preceding gene: 187934660
Following gene: 187933059
Centisome position: 72.38
GC content: 22.66
Gene sequence:
>1209_bases ATGAGAAATCCGTATAAGGAATTAGCAGAATCATTAAATAAAAAAAATAAAATATTAGATGAATTATCAGAAGATATATT TATAAAAAATAAAGAGTTAGAAACATCTATATTAAATTTAAAGAATAAAGAATATTTATATGAAACATTTTTTAGATTTA TGCCTCATCCAATAATATTGATTAGTTTAGAAAACAATAGAATATTATTTGCAAATAAAGCTTTTTTAAATTTAGTTGAT GTAAAAAATGTTAGAGATGTAATAAATAAAAAAATAAACAAGTATATACATTTTGTTACATCTAGCAATGATACAGATCT TATTTTCAATGCTATTTTAAGTTCTAAAACTGAGGAAAGATTTGTTAATGCTAAATTTTTATCAATGTATAAAGATAAAA TGGAAGATTTAATTTTAATAGAAGATAACACATCTAAAGTATTGACAGAAGAGATAAAAAAAGAAGTTGAGAGTAGAATG GTTGAAGAAAGAATAAGAACTGAATTTTTATCTAGTATAAGTCATGATTTAAAGACGCCTATAAATGTTATATATTCATC TATACAAGTTCAACGAATATATACTAATAAAAATGATATCAAATCATTAGAAAAATATAATTCTATATCTAAAATGAATT GTATCTCACTTATTAAGTTAACTAATAACTTAATTGATATGTCAAAAATAAATTCGAATTTTTTAATGCCAAATTTAGAA ATGATTAATGTTGTTGAAACAACAGAAGATATAGTTACATCTCTTGTAGATTATGCACAAAGTAATAGTATAGAAATAAT ATTTAATACTAACACTGAAGAAAGCTATTTAAATTTAGATTATGAATTTTTACAAAGAATAATTTTAAATTTAATATCTA ATTCAATAAAGTTTACTCCGATCGATGGAAAGATAATAATAGATATATTAGATGAAGAAGAAAGTGTAAAAATAAGCATA ATGGATAATGGAGCAGGAATGAATGAAGAGTTTATAAAAGAAGCTTTCTGTAAGTATTCAATGGATAAATATTCAAAAAA ATCTAAAAAGGGGACAGGCATAGGATTATTTGTTGTTAAAAAATTAGTTGAACTACAGTCAGGGAAGATTGAAATAAAAA GTAAACTTGGCGAGGGAACAAAGATAACAATAATATTTCCGAAGGAGAATTTAGATGAGGAAGATGCAACAAGATTTAAA TCTAAGTAG
Upstream 100 bases:
>100_bases TTTATTTATGTATCCATTAAATGGAATTTTACTTAGATTTAGAGAAATACTACTTTTAAGTGTATTTAATATATTTTTTA GTATGTTTTTTAAAAACTTT
Downstream 100 bases:
>100_bases TTTAAAATTAGATACAAAAATTAAATTTTTATCTATTGAGTTTATAATGTACTTAATTTATAATTTGTATTTCTATCTTA GTAAACAATACAAATTATAT
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MRNPYKELAESLNKKNKILDELSEDIFIKNKELETSILNLKNKEYLYETFFRFMPHPIILISLENNRILFANKAFLNLVD VKNVRDVINKKINKYIHFVTSSNDTDLIFNAILSSKTEERFVNAKFLSMYKDKMEDLILIEDNTSKVLTEEIKKEVESRM VEERIRTEFLSSISHDLKTPINVIYSSIQVQRIYTNKNDIKSLEKYNSISKMNCISLIKLTNNLIDMSKINSNFLMPNLE MINVVETTEDIVTSLVDYAQSNSIEIIFNTNTEESYLNLDYEFLQRIILNLISNSIKFTPIDGKIIIDILDEEESVKISI MDNGAGMNEEFIKEAFCKYSMDKYSKKSKKGTGIGLFVVKKLVELQSGKIEIKSKLGEGTKITIIFPKENLDEEDATRFK SK
Sequences:
>Translated_402_residues MRNPYKELAESLNKKNKILDELSEDIFIKNKELETSILNLKNKEYLYETFFRFMPHPIILISLENNRILFANKAFLNLVD VKNVRDVINKKINKYIHFVTSSNDTDLIFNAILSSKTEERFVNAKFLSMYKDKMEDLILIEDNTSKVLTEEIKKEVESRM VEERIRTEFLSSISHDLKTPINVIYSSIQVQRIYTNKNDIKSLEKYNSISKMNCISLIKLTNNLIDMSKINSNFLMPNLE MINVVETTEDIVTSLVDYAQSNSIEIIFNTNTEESYLNLDYEFLQRIILNLISNSIKFTPIDGKIIIDILDEEESVKISI MDNGAGMNEEFIKEAFCKYSMDKYSKKSKKGTGIGLFVVKKLVELQSGKIEIKSKLGEGTKITIIFPKENLDEEDATRFK SK >Mature_402_residues MRNPYKELAESLNKKNKILDELSEDIFIKNKELETSILNLKNKEYLYETFFRFMPHPIILISLENNRILFANKAFLNLVD VKNVRDVINKKINKYIHFVTSSNDTDLIFNAILSSKTEERFVNAKFLSMYKDKMEDLILIEDNTSKVLTEEIKKEVESRM VEERIRTEFLSSISHDLKTPINVIYSSIQVQRIYTNKNDIKSLEKYNSISKMNCISLIKLTNNLIDMSKINSNFLMPNLE MINVVETTEDIVTSLVDYAQSNSIEIIFNTNTEESYLNLDYEFLQRIILNLISNSIKFTPIDGKIIIDILDEEESVKISI MDNGAGMNEEFIKEAFCKYSMDKYSKKSKKGTGIGLFVVKKLVELQSGKIEIKSKLGEGTKITIIFPKENLDEEDATRFK SK
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=275, Percent_Identity=25.8181818181818, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1786912, Length=267, Percent_Identity=24.3445692883895, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI48994928, Length=240, Percent_Identity=27.9166666666667, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788549, Length=239, Percent_Identity=25.1046025104602, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789149, Length=233, Percent_Identity=28.755364806867, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI145693157, Length=274, Percent_Identity=25.1824817518248, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1786783, Length=225, Percent_Identity=21.7777777777778, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1786600, Length=234, Percent_Identity=24.7863247863248, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1790436, Length=129, Percent_Identity=31.0077519379845, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1788393, Length=229, Percent_Identity=20.9606986899563, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788279, Length=214, Percent_Identity=28.5046728971963, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 46607; Mature: 46607
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNPYKELAESLNKKNKILDELSEDIFIKNKELETSILNLKNKEYLYETFFRFMPHPIIL CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCHHHHHHHHHHHCCCCEEE ISLENNRILFANKAFLNLVDVKNVRDVINKKINKYIHFVTSSNDTDLIFNAILSSKTEER EEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCHHHH FVNAKFLSMYKDKMEDLILIEDNTSKVLTEEIKKEVESRMVEERIRTEFLSSISHDLKTP HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH INVIYSSIQVQRIYTNKNDIKSLEKYNSISKMNCISLIKLTNNLIDMSKINSNFLMPNLE HHHHHHHHEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH MINVVETTEDIVTSLVDYAQSNSIEIIFNTNTEESYLNLDYEFLQRIILNLISNSIKFTP HEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHEECCHHHHHHHHHHHHCCCCEEEE IDGKIIIDILDEEESVKISIMDNGAGMNEEFIKEAFCKYSMDKYSKKSKKGTGIGLFVVK CCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KLVELQSGKIEIKSKLGEGTKITIIFPKENLDEEDATRFKSK HHHHHCCCCEEEEHHCCCCCEEEEEECCCCCCHHHHHHCCCC >Mature Secondary Structure MRNPYKELAESLNKKNKILDELSEDIFIKNKELETSILNLKNKEYLYETFFRFMPHPIIL CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCHHHHHHHHHHHCCCCEEE ISLENNRILFANKAFLNLVDVKNVRDVINKKINKYIHFVTSSNDTDLIFNAILSSKTEER EEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCHHHH FVNAKFLSMYKDKMEDLILIEDNTSKVLTEEIKKEVESRMVEERIRTEFLSSISHDLKTP HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH INVIYSSIQVQRIYTNKNDIKSLEKYNSISKMNCISLIKLTNNLIDMSKINSNFLMPNLE HHHHHHHHEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH MINVVETTEDIVTSLVDYAQSNSIEIIFNTNTEESYLNLDYEFLQRIILNLISNSIKFTP HEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHEECCHHHHHHHHHHHHCCCCEEEE IDGKIIIDILDEEESVKISIMDNGAGMNEEFIKEAFCKYSMDKYSKKSKKGTGIGLFVVK CCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KLVELQSGKIEIKSKLGEGTKITIIFPKENLDEEDATRFKSK HHHHHCCCCEEEEHHCCCCCEEEEEECCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]