| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933749
Identifier: 187933749
GI number: 187933749
Start: 2230302
End: 2230916
Strand: Reverse
Name: 187933749
Synonym: CLL_A2131
Alternate gene names: NA
Gene position: 2230916-2230302 (Counterclockwise)
Preceding gene: 187933378
Following gene: 187935377
Centisome position: 58.7
GC content: 26.67
Gene sequence:
>615_bases ATGAAATACATAAAAAAACTTCCAGATACAGATAAGGCGTTAAGTGAAAAACTTACATTAAACAATTGGAAAAAAATAAA AGAGCCATCTAATTTTACATGGACTATTTTATTATCTACACCATTTATGTTGATAAATGGCGCAATTGAAATGTTTATTT TCTATAACTTATATACACCACTACAAGATTTCTTAAAAAGCAATGAAGGATTCAACATTACATTGGAATTACATTTAGTA ACATTATTATTTATCCCTGTTATCTTTATTTTTATGACAATACATGAATTCTTACATGCGTGTTTTATTCCAAATGTTTT AAAATCAGATAAAACATATTGGGGAATAAATGGCATTTGTGGATTTGTTACCACCTCTGAAAAAATAAAGAAAAGTAGAT TTTTGCTTATTTCAATTATGCCACTTTTACTTTTATCTATTGTATTACCATTTGTTTTAAATGCATTTGGATGGTTAAAT GGGTATACAATTTTTCTTTGCTTATTGAATGCAATGGGTTCATGTGTAGATTGCTTAAATATATGCTTGATAGCAACACA AGTTCCAAATGGAGCTTATGTCTTAAATAATGGATTTGAAACATATTTTAAGTAG
Upstream 100 bases:
>100_bases AATTGAATAATTTGGTATTAAATACATGATAAAATTAAATAAAAATTACATATGGCTTAGTGAATTGTATACGAGCTGTT AATGAAAGGAATTACTTTAA
Downstream 100 bases:
>100_bases TTTGGAAAATAAAAAAACTTAGTTATTATTGTAGGATATTCGTTTGATAATATAATACAAAAAGATTCACAGGAATTTGA GTGTATGATTGCTAACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MKYIKKLPDTDKALSEKLTLNNWKKIKEPSNFTWTILLSTPFMLINGAIEMFIFYNLYTPLQDFLKSNEGFNITLELHLV TLLFIPVIFIFMTIHEFLHACFIPNVLKSDKTYWGINGICGFVTTSEKIKKSRFLLISIMPLLLLSIVLPFVLNAFGWLN GYTIFLCLLNAMGSCVDCLNICLIATQVPNGAYVLNNGFETYFK
Sequences:
>Translated_204_residues MKYIKKLPDTDKALSEKLTLNNWKKIKEPSNFTWTILLSTPFMLINGAIEMFIFYNLYTPLQDFLKSNEGFNITLELHLV TLLFIPVIFIFMTIHEFLHACFIPNVLKSDKTYWGINGICGFVTTSEKIKKSRFLLISIMPLLLLSIVLPFVLNAFGWLN GYTIFLCLLNAMGSCVDCLNICLIATQVPNGAYVLNNGFETYFK >Mature_204_residues MKYIKKLPDTDKALSEKLTLNNWKKIKEPSNFTWTILLSTPFMLINGAIEMFIFYNLYTPLQDFLKSNEGFNITLELHLV TLLFIPVIFIFMTIHEFLHACFIPNVLKSDKTYWGINGICGFVTTSEKIKKSRFLLISIMPLLLLSIVLPFVLNAFGWLN GYTIFLCLLNAMGSCVDCLNICLIATQVPNGAYVLNNGFETYFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23360; Mature: 23360
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIKKLPDTDKALSEKLTLNNWKKIKEPSNFTWTILLSTPFMLINGAIEMFIFYNLYTP CCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH LQDFLKSNEGFNITLELHLVTLLFIPVIFIFMTIHEFLHACFIPNVLKSDKTYWGINGIC HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEECCCCHH GFVTTSEKIKKSRFLLISIMPLLLLSIVLPFVLNAFGWLNGYTIFLCLLNAMGSCVDCLN HHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICLIATQVPNGAYVLNNGFETYFK HHHHHEECCCCCEEECCCCHHHCC >Mature Secondary Structure MKYIKKLPDTDKALSEKLTLNNWKKIKEPSNFTWTILLSTPFMLINGAIEMFIFYNLYTP CCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH LQDFLKSNEGFNITLELHLVTLLFIPVIFIFMTIHEFLHACFIPNVLKSDKTYWGINGIC HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEECCCCHH GFVTTSEKIKKSRFLLISIMPLLLLSIVLPFVLNAFGWLNGYTIFLCLLNAMGSCVDCLN HHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICLIATQVPNGAYVLNNGFETYFK HHHHHEECCCCCEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA