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The map label for this gene is yvaQ [H]

Identifier: 187933603

GI number: 187933603

Start: 2768844

End: 2770613

Strand: Reverse

Name: yvaQ [H]

Synonym: CLL_A2652

Alternate gene names: 187933603

Gene position: 2770613-2768844 (Counterclockwise)

Preceding gene: 187933929

Following gene: 187933908

Centisome position: 72.9

GC content: 23.28

Gene sequence:

>1770_bases
ATGAAAAAAAATATATTTTATACAAAGAGTAAAAGAGAGAATTATAAAAAAGATATTATATTTTTAAAAAATTTAAGTGT
AAAAGTTAAATTAAGATCTTCATATATTATATTATCTATGTTGATACTTTTAATAACGTTGATTTCTATTAAAAGTATAG
ATACAGTAAGTAAAAATTCTAATAAAATTTATAATATAAATTTTAAATCTATACAAACTATAGATAATATTAATTCAAAT
ATAAAAGAACTTGATTCATATTTTATGAATATATTTATGAGTTCTGATGTCAATGAGAGCTATAAATATTCAAATAAAAT
TAAAATACTATTACATCAAACTAATGCATTTCTAGAAAATTATGAAACTATTAATACAACAGAAATTGAGACAAATAAGT
TTATCCAATTAAAGGAGTATGCAAATAGCTTAGAAAAGTGTTCTTTAGATATTCTTCAATTAATAGATTCCGGAAATTTA
AGTGAAGCAAATGAAATATATAACAAAGATATGCTTAGAATAAAAAATAATGTTTATGATTTATTAAAAACTCTTATTAA
CTTGTCTGAAAGTAATGCGAATAAAAGTAGTATAGAGAATACTAAAATATTTAAATCCGTTTTAATAAGCACTATAACAA
TAGCTTCTATAGGTTTAATAATTTCATTTATATTAATATTTTTAATAGGTAAACTTATAATAAAGCCATTGAAGGAAATA
GAAAATTTAGCTGAAAGAATGTCTAAATATGATGTTTCAAAAAACATAGAACTAAATAGCAAAGATGAATTTGGAAGAAC
AGGAGAGTTATTAAATAGATCGCAGGAAAACATTAAAGGCCTTATATCATTGATAATTCAAGAATCTTATGAGTTAAGTT
CATTAAGTGAAGAATTATCAGCTACTGTTCAAGAAGTAAATTCAAAGGTAGATATGATAGATACATCAACAGATGAGATA
AGTAATGTAATGAAGCAAACTAATAAAACTTATAATGTAATAAATGATTCTATTAGCAGTGTTAATAATAATATGGAAAA
ACTATCATACAAAGCAGAAGAGGGAAATATTAATGCAAATAAAATTAAAAGTAGAGCTATAATAATTAAAAATGATAGTG
AAAAAGCAATAAATAATATATCAGAGATATATTCAAATAAAGAAAATGAGATTTTAAAAGCTATGGAAGATGTTAAAGTT
GTAAGTGAAATTAAAAAAATGGCAGATATAATAGATAATATTTCAAAGCAAACAAATCTTTTAGCATTAAACGCCTCTAT
TGAAGCAGCTAGAGCTGGAGAGGCTGGAAAAGGATTTAGTGTAGTTGCAAATGAGGTAAAAAGACTTGCAGAAGAATCAT
CAAATGCTGTAGGTACTATAAAAAATACAATCAGTAAGGTTGAAAGTTCAGTAGAAAATTTATTAGTAAGTAGTAATGAT
ATTCTAAAGTTTATAGGAGAAGATATAAACAAGAATTTAAAGGATTATTCTAATATAAGTAGTAAATATATTGATGACGG
TGACTTTGTAAGTAATATGTCAAAAGAGTTAGCAGTTTTATCAAAAGAAGTAGATAATAATATGGAATCAGTTGGTAAGT
CTATATATAATATTGGAATAGATAGCAATAAATCTTCTAAGAGTATTGATGATATTCAAAATAGTTTACATGATACATCA
CTTTCAATGAAGCAAGTTTTAATGGCAGCAGAGGAACAAGCTACTATAGCATTGAAAATTGATGATCTTATTAAAAATTT
TATGATTTAA

Upstream 100 bases:

>100_bases
AGTTGATTTATAATGATAATATAATAATTGGAAACGGTTCTAATTATTATAAATTTCAAATTTAATAAATTATATTTAAA
TAATTAGAAGGGAATATCAT

Downstream 100 bases:

>100_bases
ATATAAGTTTGTTAAAAAACAAAGCTGATTTTATAGTGTAAAACTAATAGATGAAGTGATTTTTTAGAATTTTAAGAAGA
AAATTTTATACCTACTAAGT

Product: membrane assosiated methyl-accepting chemotaxis protein with hamp domain

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MKKNIFYTKSKRENYKKDIIFLKNLSVKVKLRSSYIILSMLILLITLISIKSIDTVSKNSNKIYNINFKSIQTIDNINSN
IKELDSYFMNIFMSSDVNESYKYSNKIKILLHQTNAFLENYETINTTEIETNKFIQLKEYANSLEKCSLDILQLIDSGNL
SEANEIYNKDMLRIKNNVYDLLKTLINLSESNANKSSIENTKIFKSVLISTITIASIGLIISFILIFLIGKLIIKPLKEI
ENLAERMSKYDVSKNIELNSKDEFGRTGELLNRSQENIKGLISLIIQESYELSSLSEELSATVQEVNSKVDMIDTSTDEI
SNVMKQTNKTYNVINDSISSVNNNMEKLSYKAEEGNINANKIKSRAIIIKNDSEKAINNISEIYSNKENEILKAMEDVKV
VSEIKKMADIIDNISKQTNLLALNASIEAARAGEAGKGFSVVANEVKRLAEESSNAVGTIKNTISKVESSVENLLVSSND
ILKFIGEDINKNLKDYSNISSKYIDDGDFVSNMSKELAVLSKEVDNNMESVGKSIYNIGIDSNKSSKSIDDIQNSLHDTS
LSMKQVLMAAEEQATIALKIDDLIKNFMI

Sequences:

>Translated_589_residues
MKKNIFYTKSKRENYKKDIIFLKNLSVKVKLRSSYIILSMLILLITLISIKSIDTVSKNSNKIYNINFKSIQTIDNINSN
IKELDSYFMNIFMSSDVNESYKYSNKIKILLHQTNAFLENYETINTTEIETNKFIQLKEYANSLEKCSLDILQLIDSGNL
SEANEIYNKDMLRIKNNVYDLLKTLINLSESNANKSSIENTKIFKSVLISTITIASIGLIISFILIFLIGKLIIKPLKEI
ENLAERMSKYDVSKNIELNSKDEFGRTGELLNRSQENIKGLISLIIQESYELSSLSEELSATVQEVNSKVDMIDTSTDEI
SNVMKQTNKTYNVINDSISSVNNNMEKLSYKAEEGNINANKIKSRAIIIKNDSEKAINNISEIYSNKENEILKAMEDVKV
VSEIKKMADIIDNISKQTNLLALNASIEAARAGEAGKGFSVVANEVKRLAEESSNAVGTIKNTISKVESSVENLLVSSND
ILKFIGEDINKNLKDYSNISSKYIDDGDFVSNMSKELAVLSKEVDNNMESVGKSIYNIGIDSNKSSKSIDDIQNSLHDTS
LSMKQVLMAAEEQATIALKIDDLIKNFMI
>Mature_589_residues
MKKNIFYTKSKRENYKKDIIFLKNLSVKVKLRSSYIILSMLILLITLISIKSIDTVSKNSNKIYNINFKSIQTIDNINSN
IKELDSYFMNIFMSSDVNESYKYSNKIKILLHQTNAFLENYETINTTEIETNKFIQLKEYANSLEKCSLDILQLIDSGNL
SEANEIYNKDMLRIKNNVYDLLKTLINLSESNANKSSIENTKIFKSVLISTITIASIGLIISFILIFLIGKLIIKPLKEI
ENLAERMSKYDVSKNIELNSKDEFGRTGELLNRSQENIKGLISLIIQESYELSSLSEELSATVQEVNSKVDMIDTSTDEI
SNVMKQTNKTYNVINDSISSVNNNMEKLSYKAEEGNINANKIKSRAIIIKNDSEKAINNISEIYSNKENEILKAMEDVKV
VSEIKKMADIIDNISKQTNLLALNASIEAARAGEAGKGFSVVANEVKRLAEESSNAVGTIKNTISKVESSVENLLVSSND
ILKFIGEDINKNLKDYSNISSKYIDDGDFVSNMSKELAVLSKEVDNNMESVGKSIYNIGIDSNKSSKSIDDIQNSLHDTS
LSMKQVLMAAEEQATIALKIDDLIKNFMI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=305, Percent_Identity=25.2459016393443, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI2367378, Length=263, Percent_Identity=28.5171102661597, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1789453, Length=359, Percent_Identity=25.6267409470752, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788194, Length=275, Percent_Identity=27.6363636363636, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788195, Length=230, Percent_Identity=30.8695652173913, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 66243; Mature: 66243

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIFYTKSKRENYKKDIIFLKNLSVKVKLRSSYIILSMLILLITLISIKSIDTVSKNS
CCCCEEEECCHHHCHHHHEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
NKIYNINFKSIQTIDNINSNIKELDSYFMNIFMSSDVNESYKYSNKIKILLHQTNAFLEN
CEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEEEEHHHHHHHC
YETINTTEIETNKFIQLKEYANSLEKCSLDILQLIDSGNLSEANEIYNKDMLRIKNNVYD
CCCCCCEEECCCHHEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LLKTLINLSESNANKSSIENTKIFKSVLISTITIASIGLIISFILIFLIGKLIIKPLKEI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENLAERMSKYDVSKNIELNSKDEFGRTGELLNRSQENIKGLISLIIQESYELSSLSEELS
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH
ATVQEVNSKVDMIDTSTDEISNVMKQTNKTYNVINDSISSVNNNMEKLSYKAEEGNINAN
HHHHHHCCHHHEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHEEECCCCCCCHH
KIKSRAIIIKNDSEKAINNISEIYSNKENEILKAMEDVKVVSEIKKMADIIDNISKQTNL
HHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LALNASIEAARAGEAGKGFSVVANEVKRLAEESSNAVGTIKNTISKVESSVENLLVSSND
EEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHH
ILKFIGEDINKNLKDYSNISSKYIDDGDFVSNMSKELAVLSKEVDNNMESVGKSIYNIGI
HHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
DSNKSSKSIDDIQNSLHDTSLSMKQVLMAAEEQATIALKIDDLIKNFMI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCC
>Mature Secondary Structure
MKKNIFYTKSKRENYKKDIIFLKNLSVKVKLRSSYIILSMLILLITLISIKSIDTVSKNS
CCCCEEEECCHHHCHHHHEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
NKIYNINFKSIQTIDNINSNIKELDSYFMNIFMSSDVNESYKYSNKIKILLHQTNAFLEN
CEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEEEEHHHHHHHC
YETINTTEIETNKFIQLKEYANSLEKCSLDILQLIDSGNLSEANEIYNKDMLRIKNNVYD
CCCCCCEEECCCHHEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LLKTLINLSESNANKSSIENTKIFKSVLISTITIASIGLIISFILIFLIGKLIIKPLKEI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENLAERMSKYDVSKNIELNSKDEFGRTGELLNRSQENIKGLISLIIQESYELSSLSEELS
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH
ATVQEVNSKVDMIDTSTDEISNVMKQTNKTYNVINDSISSVNNNMEKLSYKAEEGNINAN
HHHHHHCCHHHEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHEEECCCCCCCHH
KIKSRAIIIKNDSEKAINNISEIYSNKENEILKAMEDVKVVSEIKKMADIIDNISKQTNL
HHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LALNASIEAARAGEAGKGFSVVANEVKRLAEESSNAVGTIKNTISKVESSVENLLVSSND
EEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHH
ILKFIGEDINKNLKDYSNISSKYIDDGDFVSNMSKELAVLSKEVDNNMESVGKSIYNIGI
HHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
DSNKSSKSIDDIQNSLHDTSLSMKQVLMAAEEQATIALKIDDLIKNFMI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]