| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933929
Identifier: 187933929
GI number: 187933929
Start: 2774366
End: 2775052
Strand: Reverse
Name: 187933929
Synonym: CLL_A2656
Alternate gene names: NA
Gene position: 2775052-2774366 (Counterclockwise)
Preceding gene: 187934153
Following gene: 187933603
Centisome position: 73.02
GC content: 26.06
Gene sequence:
>687_bases TTGAACAATGAATATATAAGAGAAAAAATATTTGAGTTATCAGATGTTAAGTATAAAGAGTTTCATAGTAAGTTATGTCC AAATACTAATAATATTGTGGGGGTAAGGGTTCCTCTTCTTAGAAAATTGGCAAAAGAAATTTCTAATGGGGAGTGGAGAG TTTATTTATCTCAAGCTGAAAATGAATATTGTGAAGAAATAATGCTTCAAGGAATGGTTATTGGATTAGCTAAAATGGAT ATAGAAGAACGAGTTAAATATATTGGAGAATTTGTGCCTAAGATTTATAATTGGGGAATATGTGATACTTTTTGTGCAGG ATTAAAATGTTTTAAATCTAATAAAGAAAAGGGATTTGACCTTTTAAACACATATTTAGATTCACAAAAAGAATTTGAGC TTAGATTTGCAATTGTTCTTTTGCTTGATTTTTATATTGTAGATGAGTATGTAGATAGAGTAATAGAGATTTTAGACAAT ATACATCATGATGGGTATTATGTAAAAATGGCAGCAGCTTGGGCTATTTCAATATGTTATATTAAATACCCAGAAAAAAC GATAAAATATTTAAAGAGTAATAAATTAGATGATTTTACTTATAATAAAGCTCTACAAAAAATTATAGAGTCATATAGAG TTGATAAAGATGAAAAAAATATAATTAGAAATATGAAAAGAAAATAA
Upstream 100 bases:
>100_bases TTTAAAAGTAATATTATAATAATATAAATTAAAGAAGTGTTTTTCTGTATAATATAGTATAGATGAAATTGAGGGTACAT GAAGGAAGGGGATTGCAAAT
Downstream 100 bases:
>100_bases AGTGAGATAAAAATATCCAAATAAAAAAGATGTTCTTTTTTTCAAGAACATCTTTTTTACACATAATTTTATTTGATAGA ACCTTGTACGATTCCTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNNEYIREKIFELSDVKYKEFHSKLCPNTNNIVGVRVPLLRKLAKEISNGEWRVYLSQAENEYCEEIMLQGMVIGLAKMD IEERVKYIGEFVPKIYNWGICDTFCAGLKCFKSNKEKGFDLLNTYLDSQKEFELRFAIVLLLDFYIVDEYVDRVIEILDN IHHDGYYVKMAAAWAISICYIKYPEKTIKYLKSNKLDDFTYNKALQKIIESYRVDKDEKNIIRNMKRK
Sequences:
>Translated_228_residues MNNEYIREKIFELSDVKYKEFHSKLCPNTNNIVGVRVPLLRKLAKEISNGEWRVYLSQAENEYCEEIMLQGMVIGLAKMD IEERVKYIGEFVPKIYNWGICDTFCAGLKCFKSNKEKGFDLLNTYLDSQKEFELRFAIVLLLDFYIVDEYVDRVIEILDN IHHDGYYVKMAAAWAISICYIKYPEKTIKYLKSNKLDDFTYNKALQKIIESYRVDKDEKNIIRNMKRK >Mature_228_residues MNNEYIREKIFELSDVKYKEFHSKLCPNTNNIVGVRVPLLRKLAKEISNGEWRVYLSQAENEYCEEIMLQGMVIGLAKMD IEERVKYIGEFVPKIYNWGICDTFCAGLKCFKSNKEKGFDLLNTYLDSQKEFELRFAIVLLLDFYIVDEYVDRVIEILDN IHHDGYYVKMAAAWAISICYIKYPEKTIKYLKSNKLDDFTYNKALQKIIESYRVDKDEKNIIRNMKRK
Specific function: Unknown
COG id: COG4912
COG function: function code L; Predicted DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27074; Mature: 27074
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNEYIREKIFELSDVKYKEFHSKLCPNTNNIVGVRVPLLRKLAKEISNGEWRVYLSQAE CCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEHHHH NEYCEEIMLQGMVIGLAKMDIEERVKYIGEFVPKIYNWGICDTFCAGLKCFKSNKEKGFD HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH LLNTYLDSQKEFELRFAIVLLLDFYIVDEYVDRVIEILDNIHHDGYYVKMAAAWAISICY HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH IKYPEKTIKYLKSNKLDDFTYNKALQKIIESYRVDKDEKNIIRNMKRK EECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MNNEYIREKIFELSDVKYKEFHSKLCPNTNNIVGVRVPLLRKLAKEISNGEWRVYLSQAE CCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEHHHH NEYCEEIMLQGMVIGLAKMDIEERVKYIGEFVPKIYNWGICDTFCAGLKCFKSNKEKGFD HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH LLNTYLDSQKEFELRFAIVLLLDFYIVDEYVDRVIEILDNIHHDGYYVKMAAAWAISICY HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH IKYPEKTIKYLKSNKLDDFTYNKALQKIIESYRVDKDEKNIIRNMKRK EECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA