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The map label for this gene is yeiE [H]

Identifier: 187933908

GI number: 187933908

Start: 2767725

End: 2768600

Strand: Reverse

Name: yeiE [H]

Synonym: CLL_A2651

Alternate gene names: 187933908

Gene position: 2768600-2767725 (Counterclockwise)

Preceding gene: 187933603

Following gene: 187935144

Centisome position: 72.85

GC content: 24.66

Gene sequence:

>876_bases
GTGAATTTTAGAAAGTTAAAGATATTTTATGAAACAGCAACTGAATTAAATATGACTAGTGTAGCTAAAAAATTATATAT
AAGTCAACCTTCAATAAGTCAAGCAATACATGAGATAGAAGACGAATTAGAAGTCAGACTATTTGATAGAATAGGTAAAA
AACTTTATTTAACACATGAAGGTGAAATTTATTTAAATTATACAAGAAGAATACTTAATTTATATGATGAATCTATAAGA
ACTATTAATGATATAAATACAAATGAAAAAGGGAAAATAAAAATAGGCGCTAGTACAACTATTGGAATATACATATTACC
TGATATAATAAAAGGATTTTTAAAAGAGCATAGTGGAATAGAAATTTCTCTAGCGATAGATAATACTTCAAATATAGAAA
AAATGATATTAGAAAATAAAATTGACTTTGCTTATATTGAGGGAACAACTAATTTGGATGAAATAGTTCAAGCAAAGGTA
TGGGAAGATGAACTTATATTTATATCGAGCTTAAATCATTCTTGGAGTAAAAAAGAAATGGTAAGTACAAAAGATATAAT
AAAAGAGAAACTTATAATGAGAGAACAGGGGAGTGGTACTAGGGAAATAATAGAAGCTTATTTAAAAAATAATAATATAG
ATTATAAAATATTTATGGAACTTGGAAATACAGAAGCTATTAAAAAAAGTGTAGAAGCTAACTTGGGTGTTAGTTGTTTA
TCTTCTAGAAGTGTAGATGAAAAAATAAAAAGTGGATGTTTAAAAGGCTATAGATTAAAGGAAGGAAAAATAACAAGAGA
TTTAAGACTTATACATCATCGCGATAAATTTTTAAATAAAAATATGAAGAATTTTATAAGTTATTCACTAAAATAA

Upstream 100 bases:

>100_bases
ATATCAGATTAACATGATATTCTTTTTTTTTATAATTATATAAGGGTATAATAAGGATAGTACATATAAATATTACAAAA
ATTTAAATGAGGTGACAGTC

Downstream 100 bases:

>100_bases
TATATAAGTAAAAACCTATTAATATCATATTATAATAAGTATTTCATTTTCAATATCAAATTTAATATAATTAACTCAAG
AAAAAGAAAACTGTTAAAAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNFRKLKIFYETATELNMTSVAKKLYISQPSISQAIHEIEDELEVRLFDRIGKKLYLTHEGEIYLNYTRRILNLYDESIR
TINDINTNEKGKIKIGASTTIGIYILPDIIKGFLKEHSGIEISLAIDNTSNIEKMILENKIDFAYIEGTTNLDEIVQAKV
WEDELIFISSLNHSWSKKEMVSTKDIIKEKLIMREQGSGTREIIEAYLKNNNIDYKIFMELGNTEAIKKSVEANLGVSCL
SSRSVDEKIKSGCLKGYRLKEGKITRDLRLIHHRDKFLNKNMKNFISYSLK

Sequences:

>Translated_291_residues
MNFRKLKIFYETATELNMTSVAKKLYISQPSISQAIHEIEDELEVRLFDRIGKKLYLTHEGEIYLNYTRRILNLYDESIR
TINDINTNEKGKIKIGASTTIGIYILPDIIKGFLKEHSGIEISLAIDNTSNIEKMILENKIDFAYIEGTTNLDEIVQAKV
WEDELIFISSLNHSWSKKEMVSTKDIIKEKLIMREQGSGTREIIEAYLKNNNIDYKIFMELGNTEAIKKSVEANLGVSCL
SSRSVDEKIKSGCLKGYRLKEGKITRDLRLIHHRDKFLNKNMKNFISYSLK
>Mature_291_residues
MNFRKLKIFYETATELNMTSVAKKLYISQPSISQAIHEIEDELEVRLFDRIGKKLYLTHEGEIYLNYTRRILNLYDESIR
TINDINTNEKGKIKIGASTTIGIYILPDIIKGFLKEHSGIEISLAIDNTSNIEKMILENKIDFAYIEGTTNLDEIVQAKV
WEDELIFISSLNHSWSKKEMVSTKDIIKEKLIMREQGSGTREIIEAYLKNNNIDYKIFMELGNTEAIKKSVEANLGVSCL
SSRSVDEKIKSGCLKGYRLKEGKITRDLRLIHHRDKFLNKNMKNFISYSLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=289, Percent_Identity=32.1799307958478, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI145693105, Length=282, Percent_Identity=26.241134751773, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI157672245, Length=290, Percent_Identity=23.1034482758621, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1790399, Length=254, Percent_Identity=22.8346456692913, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1788748, Length=244, Percent_Identity=22.5409836065574, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1787530, Length=251, Percent_Identity=24.7011952191235, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787879, Length=243, Percent_Identity=24.6913580246914, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI87082132, Length=292, Percent_Identity=23.2876712328767, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1788296, Length=245, Percent_Identity=27.7551020408163, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790208, Length=244, Percent_Identity=25, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789639, Length=122, Percent_Identity=29.5081967213115, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787806, Length=174, Percent_Identity=24.1379310344828, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789204, Length=252, Percent_Identity=17.0634920634921, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081904, Length=222, Percent_Identity=24.7747747747748, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788297, Length=261, Percent_Identity=20.6896551724138, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI2367136, Length=139, Percent_Identity=28.0575539568345, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789173, Length=188, Percent_Identity=24.468085106383, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788887, Length=243, Percent_Identity=23.4567901234568, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787601, Length=173, Percent_Identity=23.121387283237, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33643; Mature: 33643

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRKLKIFYETATELNMTSVAKKLYISQPSISQAIHEIEDELEVRLFDRIGKKLYLTHE
CCCEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
GEIYLNYTRRILNLYDESIRTINDINTNEKGKIKIGASTTIGIYILPDIIKGFLKEHSGI
CEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHCCCC
EISLAIDNTSNIEKMILENKIDFAYIEGTTNLDEIVQAKVWEDELIFISSLNHSWSKKEM
EEEEEECCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHH
VSTKDIIKEKLIMREQGSGTREIIEAYLKNNNIDYKIFMELGNTEAIKKSVEANLGVSCL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCHHHH
SSRSVDEKIKSGCLKGYRLKEGKITRDLRLIHHRDKFLNKNMKNFISYSLK
HCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MNFRKLKIFYETATELNMTSVAKKLYISQPSISQAIHEIEDELEVRLFDRIGKKLYLTHE
CCCEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
GEIYLNYTRRILNLYDESIRTINDINTNEKGKIKIGASTTIGIYILPDIIKGFLKEHSGI
CEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHCCCC
EISLAIDNTSNIEKMILENKIDFAYIEGTTNLDEIVQAKVWEDELIFISSLNHSWSKKEM
EEEEEECCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHH
VSTKDIIKEKLIMREQGSGTREIIEAYLKNNNIDYKIFMELGNTEAIKKSVEANLGVSCL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCHHHH
SSRSVDEKIKSGCLKGYRLKEGKITRDLRLIHHRDKFLNKNMKNFISYSLK
HCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]