Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
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Accession | NC_010674 |
Length | 3,800,327 |
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The map label for this gene is 187932722
Identifier: 187932722
GI number: 187932722
Start: 2260719
End: 2261489
Strand: Reverse
Name: 187932722
Synonym: CLL_A2173
Alternate gene names: NA
Gene position: 2261489-2260719 (Counterclockwise)
Preceding gene: 187933512
Following gene: 187935490
Centisome position: 59.51
GC content: 26.46
Gene sequence:
>771_bases ATGAAGAAAAGATATAAAACACTACTTAAATGCTTTCTAGGTTTACTCGTAGGTCTAATAATAATAATTCTTTTGAATTT TATACCCACACTAAATTTAAAAACTAAAGATATGATAATAATTGAAAAAGATCATTTTATAATTTACTATGAAAAAAATG ATGAAAATGCAGCAACTGATATTAGTAATAGATTAGGAAAAGGTTATAACTTAGTCTCTAACTCAATTAAAATAAGCCCT GACTATAAAACTGATGTTTATATTTATAAAAATTTAGATGAGTTCCATATGAAAAAATATGGGTTTTGGGGAAGGTTCTT TGGTCCAGAATGGTATATTGGAGATAATATAAAAAATAAAGTTATTATTGTTTCACCAAATTCTCCTGGGAAACAGCATA ATTATGATGAGGTAGCAGATGCTGCTCTACATGAGTATATACATACATTAATGTGGAGTATTAATCCAAAAGTATCAAAG TTTTTAAATGAAGGTATGGCTGGATATATCTCAGGTAATGCAAAACCAGTTCATAAGATTACAAGCGCTCCATCATATGA AGATACTAAAGTCACTGATCCTGTGACATTTGGAAATCATGGTATGTATTCATTTTCTTATACTTATATTGAATACTTGG ATAAAACATATGGTATGGAAAAAGTTTTAGAGTTAGTAAAAGATAATAATTATGAACAAACTTTTGAAAAAACTGAAAAA GAGATATTTGATGAATGGATAAAATTTTTAAATTCAAATTACTTAAACTAA
Upstream 100 bases:
>100_bases ATAAGTATAATATTTTTGCTAAATTGATTTGGAATGAATATTATAAAAAAGAAGGTGGAAATGTCTTAAAGTTTACAAAG AGAAATATATAGGGGGAAAA
Downstream 100 bases:
>100_bases TTGAATATTAAATAAATACAATTATTAAAATTAAATGACAAATTAAACATATAGAAAGTCCGGAGGTAAACTTAATGAAA AAATTTTCAAAACTGTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKKRYKTLLKCFLGLLVGLIIIILLNFIPTLNLKTKDMIIIEKDHFIIYYEKNDENAATDISNRLGKGYNLVSNSIKISP DYKTDVYIYKNLDEFHMKKYGFWGRFFGPEWYIGDNIKNKVIIVSPNSPGKQHNYDEVADAALHEYIHTLMWSINPKVSK FLNEGMAGYISGNAKPVHKITSAPSYEDTKVTDPVTFGNHGMYSFSYTYIEYLDKTYGMEKVLELVKDNNYEQTFEKTEK EIFDEWIKFLNSNYLN
Sequences:
>Translated_256_residues MKKRYKTLLKCFLGLLVGLIIIILLNFIPTLNLKTKDMIIIEKDHFIIYYEKNDENAATDISNRLGKGYNLVSNSIKISP DYKTDVYIYKNLDEFHMKKYGFWGRFFGPEWYIGDNIKNKVIIVSPNSPGKQHNYDEVADAALHEYIHTLMWSINPKVSK FLNEGMAGYISGNAKPVHKITSAPSYEDTKVTDPVTFGNHGMYSFSYTYIEYLDKTYGMEKVLELVKDNNYEQTFEKTEK EIFDEWIKFLNSNYLN >Mature_256_residues MKKRYKTLLKCFLGLLVGLIIIILLNFIPTLNLKTKDMIIIEKDHFIIYYEKNDENAATDISNRLGKGYNLVSNSIKISP DYKTDVYIYKNLDEFHMKKYGFWGRFFGPEWYIGDNIKNKVIIVSPNSPGKQHNYDEVADAALHEYIHTLMWSINPKVSK FLNEGMAGYISGNAKPVHKITSAPSYEDTKVTDPVTFGNHGMYSFSYTYIEYLDKTYGMEKVLELVKDNNYEQTFEKTEK EIFDEWIKFLNSNYLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29881; Mature: 29881
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRYKTLLKCFLGLLVGLIIIILLNFIPTLNLKTKDMIIIEKDHFIIYYEKNDENAATD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCCHHHH ISNRLGKGYNLVSNSIKISPDYKTDVYIYKNLDEFHMKKYGFWGRFFGPEWYIGDNIKNK HHHHHCCCCEECCCCEEECCCCCCCEEEEECCHHHHHHHHCCCEECCCCCEEECCCCCCC VIIVSPNSPGKQHNYDEVADAALHEYIHTLMWSINPKVSKFLNEGMAGYISGNAKPVHKI EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCHHHH TSAPSYEDTKVTDPVTFGNHGMYSFSYTYIEYLDKTYGMEKVLELVKDNNYEQTFEKTEK CCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHH EIFDEWIKFLNSNYLN HHHHHHHHHHHCCCCC >Mature Secondary Structure MKKRYKTLLKCFLGLLVGLIIIILLNFIPTLNLKTKDMIIIEKDHFIIYYEKNDENAATD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCCHHHH ISNRLGKGYNLVSNSIKISPDYKTDVYIYKNLDEFHMKKYGFWGRFFGPEWYIGDNIKNK HHHHHCCCCEECCCCEEECCCCCCCEEEEECCHHHHHHHHCCCEECCCCCEEECCCCCCC VIIVSPNSPGKQHNYDEVADAALHEYIHTLMWSINPKVSKFLNEGMAGYISGNAKPVHKI EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCHHHH TSAPSYEDTKVTDPVTFGNHGMYSFSYTYIEYLDKTYGMEKVLELVKDNNYEQTFEKTEK CCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHH EIFDEWIKFLNSNYLN HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA