Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
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Accession | NC_010674 |
Length | 3,800,327 |
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The map label for this gene is 187933512
Identifier: 187933512
GI number: 187933512
Start: 2261946
End: 2264063
Strand: Reverse
Name: 187933512
Synonym: CLL_A2174
Alternate gene names: NA
Gene position: 2264063-2261946 (Counterclockwise)
Preceding gene: 187934195
Following gene: 187932722
Centisome position: 59.58
GC content: 28.38
Gene sequence:
>2118_bases TTGAATAAATTTAAAAATATTAAAATCTTAGCTTTAATGTTGATTTTCATAACATTTGTTAATTTTAATTGTGTTGCATT TGCAAGTATAATTGATAATACTGAAATAAAGAAAGAAAATTTTGTAGGTACAACTGAGAATGTTGAAGCAAAACAAGAAA ATATGCTAGATAAACCTGAAGCTACTAAAGTAAGTGAAGAAAATGCTACAGGTATAGCTGATAATATTAAAATAAATGAA GAAAATGTAGAAGAAAAAGAGGAGAATACTGAAGCAAAAAAAGAAGATTTTGCAACGCCAATAGATTATGGATTTTGGTT TGATAAAGGTAGTAACAATAAAGATATGATTAAAGCCTATGTAGATTTAGGCGTAAATAACTATGAATATCATAAAAAAA TTACTCTTAATATGCATATAGAGAGAGAAAATGGAGCTGTTGAACATTATTTATATTACTTAAAACATAAGGGGAATGCA GATGATGGCAGAGAAAAATGGGGAACTGATATAATAAATATTGATACTAATCCTAGTTGGAATGGTGAAATAAAAAATGT TTATATTACATACAATGTTTTAAACGATATAGATAATGATGGAAAAAGAGAACTATGTCCTTCAAAAAATAAATATTGTA TTGCAACTTTAAAAGACTTAGATAAAACAAAATTGAAAAGCAACCTTGGCGTTCCTAAAGTTTCAAAAGATAATGATTAT ATAAATTCTAATGAAATGGATACATCTCTAGCAAAAACTATGTCTCATAAATTTAAAGATTCTATTCCAAAAACAGATGT ATATTTTGCACCTTATGGTAATCCAGAATGTAGAGTTATTTCTGAAGTTGAAAAAGTAATACAAAATAAGCAAGAAGATC CAGATGGATTTCATTATATACATGCTTCTTATTATGATATAAATGATTATAGAATTGTTGATAAACTAATAGAAGCTCAT GATAAAGGTGTAGAAGTTGTGATATTAAGTGATTCTAGCCACATGTATACATCAAAAACATGGGAAACTGAATATAAAAA AATGCAACAAGCAGGAATTGATGTTGTAGGAATATGTAGAGACGGATTTGCAGCTTCAAACCACACTAAAATCGCAATAT ATGATGGTAATGTTGTATCTACTGGTTCTTATAATTGGGAGTATGGAGCAGCTGAACAAAATTCTGAAAATGTATCTTTT TTCACTTCAAAAGAATTAGCTTCTGTTTATGAGCAAATTTTTCAAAGTGTTGCTGGATTAGGAGAAATTACATATGAAAA TGATATTTCAAGCAAAATTAATGTCTACTATTCTCAATACCATAATATCCCCAAAGCTATTTATGATGAAATTGAAAATG CAAAAAACGAAGTAGTTATATCAATGTTCACATTACGCCACTTAGATTTTACTGATAATGGTGTACAAAAGGATATGATT GATGCCTTAATAAGAGCTCAAAAAAGAGGTGTAAAAGTCCGTTTGGTATTAGAAAGTAACATTGCAGACGAAGGAGAATA TTATGGAACAATAACACCAAATGACTTAACAGATGAATGGCTTTCAGAAAATGGAATAGATGTAGTTAAAGTTCGCACTA ATTATCATGATAATAAATATTCTACTATGCACCATAAATTTGCTGTTATAGATAGAAAAACTACACTTACAGGTTCTGCA AATTGGTTTTCAGCTACATTAGTTTCAGATGATGATCTTATTGTTATAAGAGATGAAAATACTGCAAAAAAATATTTTGG TGAATTTGTTAATTTAAGAAGCCATTATGATCCTAAATTTGATGCGACAGAATTCCCTAAAACTAAATTAAGTTTTTTGG TATCTAACAATAATACAAAATTCGGTGAAAAGCTATACGTAGTAGGTAGTATCCCTGAACTTGGAAATTGGGATATAAAC AACGCAATTGAATTGAATGGTGATAACTGGCCAAATTGGAAATCAGAAGATAGCATAACACTTCCTTCTGGAATGAATTT TGAGTACAAATATGTTGTTAAAACTGCATCAGGTTTAATTTATGAATCAGGAGAAAATAGACAACACATTGTAAATCCTA TTAATTCTGAAGAAACTATACAAGAAAGCTTTAATTAA
Upstream 100 bases:
>100_bases CTACTATTAACTAGCATATTGATTTATTAAATTTTCAATATGCCTAATAGTAGTTCTTTAAAAAATCTAAAGACATAAAA ATATTAGGGGGAGACTCAAG
Downstream 100 bases:
>100_bases TAGACTTGTTTTAAAGTCGTTCAATGAAAGGTAGAGATTAAATAAAAGGTCTCTACCTTTTGTTTTATTATATTCTTAAT AACTATAACATAGCAGTTTA
Product: starch binding domain protein
Products: NA
Alternate protein names: Cardiolipin Synthetase
Number of amino acids: Translated: 705; Mature: 705
Protein sequence:
>705_residues MNKFKNIKILALMLIFITFVNFNCVAFASIIDNTEIKKENFVGTTENVEAKQENMLDKPEATKVSEENATGIADNIKINE ENVEEKEENTEAKKEDFATPIDYGFWFDKGSNNKDMIKAYVDLGVNNYEYHKKITLNMHIERENGAVEHYLYYLKHKGNA DDGREKWGTDIINIDTNPSWNGEIKNVYITYNVLNDIDNDGKRELCPSKNKYCIATLKDLDKTKLKSNLGVPKVSKDNDY INSNEMDTSLAKTMSHKFKDSIPKTDVYFAPYGNPECRVISEVEKVIQNKQEDPDGFHYIHASYYDINDYRIVDKLIEAH DKGVEVVILSDSSHMYTSKTWETEYKKMQQAGIDVVGICRDGFAASNHTKIAIYDGNVVSTGSYNWEYGAAEQNSENVSF FTSKELASVYEQIFQSVAGLGEITYENDISSKINVYYSQYHNIPKAIYDEIENAKNEVVISMFTLRHLDFTDNGVQKDMI DALIRAQKRGVKVRLVLESNIADEGEYYGTITPNDLTDEWLSENGIDVVKVRTNYHDNKYSTMHHKFAVIDRKTTLTGSA NWFSATLVSDDDLIVIRDENTAKKYFGEFVNLRSHYDPKFDATEFPKTKLSFLVSNNNTKFGEKLYVVGSIPELGNWDIN NAIELNGDNWPNWKSEDSITLPSGMNFEYKYVVKTASGLIYESGENRQHIVNPINSEETIQESFN
Sequences:
>Translated_705_residues MNKFKNIKILALMLIFITFVNFNCVAFASIIDNTEIKKENFVGTTENVEAKQENMLDKPEATKVSEENATGIADNIKINE ENVEEKEENTEAKKEDFATPIDYGFWFDKGSNNKDMIKAYVDLGVNNYEYHKKITLNMHIERENGAVEHYLYYLKHKGNA DDGREKWGTDIINIDTNPSWNGEIKNVYITYNVLNDIDNDGKRELCPSKNKYCIATLKDLDKTKLKSNLGVPKVSKDNDY INSNEMDTSLAKTMSHKFKDSIPKTDVYFAPYGNPECRVISEVEKVIQNKQEDPDGFHYIHASYYDINDYRIVDKLIEAH DKGVEVVILSDSSHMYTSKTWETEYKKMQQAGIDVVGICRDGFAASNHTKIAIYDGNVVSTGSYNWEYGAAEQNSENVSF FTSKELASVYEQIFQSVAGLGEITYENDISSKINVYYSQYHNIPKAIYDEIENAKNEVVISMFTLRHLDFTDNGVQKDMI DALIRAQKRGVKVRLVLESNIADEGEYYGTITPNDLTDEWLSENGIDVVKVRTNYHDNKYSTMHHKFAVIDRKTTLTGSA NWFSATLVSDDDLIVIRDENTAKKYFGEFVNLRSHYDPKFDATEFPKTKLSFLVSNNNTKFGEKLYVVGSIPELGNWDIN NAIELNGDNWPNWKSEDSITLPSGMNFEYKYVVKTASGLIYESGENRQHIVNPINSEETIQESFN >Mature_705_residues MNKFKNIKILALMLIFITFVNFNCVAFASIIDNTEIKKENFVGTTENVEAKQENMLDKPEATKVSEENATGIADNIKINE ENVEEKEENTEAKKEDFATPIDYGFWFDKGSNNKDMIKAYVDLGVNNYEYHKKITLNMHIERENGAVEHYLYYLKHKGNA DDGREKWGTDIINIDTNPSWNGEIKNVYITYNVLNDIDNDGKRELCPSKNKYCIATLKDLDKTKLKSNLGVPKVSKDNDY INSNEMDTSLAKTMSHKFKDSIPKTDVYFAPYGNPECRVISEVEKVIQNKQEDPDGFHYIHASYYDINDYRIVDKLIEAH DKGVEVVILSDSSHMYTSKTWETEYKKMQQAGIDVVGICRDGFAASNHTKIAIYDGNVVSTGSYNWEYGAAEQNSENVSF FTSKELASVYEQIFQSVAGLGEITYENDISSKINVYYSQYHNIPKAIYDEIENAKNEVVISMFTLRHLDFTDNGVQKDMI DALIRAQKRGVKVRLVLESNIADEGEYYGTITPNDLTDEWLSENGIDVVKVRTNYHDNKYSTMHHKFAVIDRKTTLTGSA NWFSATLVSDDDLIVIRDENTAKKYFGEFVNLRSHYDPKFDATEFPKTKLSFLVSNNNTKFGEKLYVVGSIPELGNWDIN NAIELNGDNWPNWKSEDSITLPSGMNFEYKYVVKTASGLIYESGENRQHIVNPINSEETIQESFN
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80596; Mature: 80596
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS51166 CBM20 ; PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFKNIKILALMLIFITFVNFNCVAFASIIDNTEIKKENFVGTTENVEAKQENMLDKPE CCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCC ATKVSEENATGIADNIKINEENVEEKEENTEAKKEDFATPIDYGFWFDKGSNNKDMIKAY CCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHE VDLGVNNYEYHKKITLNMHIERENGAVEHYLYYLKHKGNADDGREKWGTDIINIDTNPSW ECCCCCCEEEEEEEEEEEEEECCCCCHHHEEEEEEECCCCCCCHHHHCCEEEEECCCCCC NGEIKNVYITYNVLNDIDNDGKRELCPSKNKYCIATLKDLDKTKLKSNLGVPKVSKDNDY CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHCHHHHHHHCCCCCCCCCCCCC INSNEMDTSLAKTMSHKFKDSIPKTDVYFAPYGNPECRVISEVEKVIQNKQEDPDGFHYI CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE HASYYDINDYRIVDKLIEAHDKGVEVVILSDSSHMYTSKTWETEYKKMQQAGIDVVGICR EEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHHHHHCCCCEEEEEC DGFAASNHTKIAIYDGNVVSTGSYNWEYGAAEQNSENVSFFTSKELASVYEQIFQSVAGL CCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCC GEITYENDISSKINVYYSQYHNIPKAIYDEIENAKNEVVISMFTLRHLDFTDNGVQKDMI CCEEECCCCCCCEEEEEHHHCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHHHH DALIRAQKRGVKVRLVLESNIADEGEYYGTITPNDLTDEWLSENGIDVVKVRTNYHDNKY HHHHHHHHCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHCCCCCEEEEEEECCCCCCC STMHHKFAVIDRKTTLTGSANWFSATLVSDDDLIVIRDENTAKKYFGEFVNLRSHYDPKF HHHEEEEEEEECCEEEECCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCC DATEFPKTKLSFLVSNNNTKFGEKLYVVGSIPELGNWDINNAIELNGDNWPNWKSEDSIT CCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCEE LPSGMNFEYKYVVKTASGLIYESGENRQHIVNPINSEETIQESFN CCCCCCEEEEEEEEECCCEEEECCCCCCHHCCCCCCHHHHHHHCC >Mature Secondary Structure MNKFKNIKILALMLIFITFVNFNCVAFASIIDNTEIKKENFVGTTENVEAKQENMLDKPE CCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCC ATKVSEENATGIADNIKINEENVEEKEENTEAKKEDFATPIDYGFWFDKGSNNKDMIKAY CCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHE VDLGVNNYEYHKKITLNMHIERENGAVEHYLYYLKHKGNADDGREKWGTDIINIDTNPSW ECCCCCCEEEEEEEEEEEEEECCCCCHHHEEEEEEECCCCCCCHHHHCCEEEEECCCCCC NGEIKNVYITYNVLNDIDNDGKRELCPSKNKYCIATLKDLDKTKLKSNLGVPKVSKDNDY CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHCHHHHHHHCCCCCCCCCCCCC INSNEMDTSLAKTMSHKFKDSIPKTDVYFAPYGNPECRVISEVEKVIQNKQEDPDGFHYI CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE HASYYDINDYRIVDKLIEAHDKGVEVVILSDSSHMYTSKTWETEYKKMQQAGIDVVGICR EEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHHHHHCCCCEEEEEC DGFAASNHTKIAIYDGNVVSTGSYNWEYGAAEQNSENVSFFTSKELASVYEQIFQSVAGL CCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCC GEITYENDISSKINVYYSQYHNIPKAIYDEIENAKNEVVISMFTLRHLDFTDNGVQKDMI CCEEECCCCCCCEEEEEHHHCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHHHH DALIRAQKRGVKVRLVLESNIADEGEYYGTITPNDLTDEWLSENGIDVVKVRTNYHDNKY HHHHHHHHCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHCCCCCEEEEEEECCCCCCC STMHHKFAVIDRKTTLTGSANWFSATLVSDDDLIVIRDENTAKKYFGEFVNLRSHYDPKF HHHEEEEEEEECCEEEECCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCC DATEFPKTKLSFLVSNNNTKFGEKLYVVGSIPELGNWDINNAIELNGDNWPNWKSEDSIT CCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCEE LPSGMNFEYKYVVKTASGLIYESGENRQHIVNPINSEETIQESFN CCCCCCEEEEEEEEECCCEEEECCCCCCHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA