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The map label for this gene is fni [H]

Identifier: 187918540

GI number: 187918540

Start: 731433

End: 732512

Strand: Direct

Name: fni [H]

Synonym: BH0684

Alternate gene names: 187918540

Gene position: 731433-732512 (Clockwise)

Preceding gene: 187918539

Following gene: 187918541

Centisome position: 79.3

GC content: 31.67

Gene sequence:

>1080_bases
ATGGATACCGAGTTTATGGGTATCGAGCCTAATATATTAAATAATAAAAAACGACAGATTGAAATTTGTTTAAATAAAGA
AGATGTTAGCAAGAGTGATAATCTTTTAAATTTTGTTAATTTAAAGCATGATGCACTCAGTGAGCTTGATTTTTATGAGA
TAGATACAAGTGAGAGTATATTTGGTTATGATATTGCTATGCCTATTTTTATCTCATCAATGACAGGGGGTATTCAAGAG
GGCAATAAACTGAATAAGTCTCTTGTTAAGATTGCAAATAACTTAAGAATTCCAATGGGTCTTGGATCTTTTAAGCTTAT
ATTTAAATATCCTGAATATATTAAATATTTCGCCTTAAGGAAGTGTGCTGATAATATTCCTTTATTTTCAAATATTGGTG
CTATTCAGTTAAGAGAATTTGGAATATTTAAAGTAATTGAGATAATTAAGAAGCTCGAGGTTGATGCCATAATTGTGCAT
TTAAATTCAGGCCAGGAATTAATGAATTCAAGAGGTGATCGAAATTTTAAAGGAATTAAGGATTCAATTGCTAGGCTTTG
TGATGCATCAAATTTACCAGTCATTGTTAAAGAAACAGGTTTTGGGATTTCACCGGGTTGTGTTATCAGTTTACTAGATC
TTGGAGTGTCTTATGTTGATCTTGCTGGTAGTGGTGGAACTAACTGGGTTTTGGTCGAAGGAATTAAAGAAGAAAATTTG
AATGTTGCGTCTTGTTTTTCTAATTGGGGCATATCTTCAGTTTTAACATTACTTAGTATTAAGGATTCTTTTAAAGATAG
GATTTTTGCATCAGGAGGATATGAGACGGGAATAGATATCGCTAAAGGCATTGCTCTTGGGGCTAAGTTGGTGGGTATTG
CATCAGCCATTCTTAGAGCTTTTTATGCGGGAGGTGAGGATGCCTTATATAAACTTTTAAAAGATTATGAATATGTTTTA
AAGATGTCTATGCTTTTAAGTAATAGTAAAAATTTGGTACAGTTTAGGTTAAATAAATATTTCTTAAGTCATCCGTTGTC
GTTTAATGTTAAGAGTTTTAAGGATTTTTATGAGACTTAG

Upstream 100 bases:

>100_bases
GTAAGGCATAATGCAAGCTTTGATGAGTATAGAGATTTTTTTGAAAATAAGATCGCGCCAGGTGAATCCCAAGGCTTCTA
TTTAAAGGAAATTAGAGAGG

Downstream 100 bases:

>100_bases
TGAGAATTTTAGAAATAAAAATATTTCAGATAAAAGACAAGAGATAAAGAGTATTTTAAAATTGAATCCTTGCGATTTTT
TTTATGATTCTGTTGATGAG

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MDTEFMGIEPNILNNKKRQIEICLNKEDVSKSDNLLNFVNLKHDALSELDFYEIDTSESIFGYDIAMPIFISSMTGGIQE
GNKLNKSLVKIANNLRIPMGLGSFKLIFKYPEYIKYFALRKCADNIPLFSNIGAIQLREFGIFKVIEIIKKLEVDAIIVH
LNSGQELMNSRGDRNFKGIKDSIARLCDASNLPVIVKETGFGISPGCVISLLDLGVSYVDLAGSGGTNWVLVEGIKEENL
NVASCFSNWGISSVLTLLSIKDSFKDRIFASGGYETGIDIAKGIALGAKLVGIASAILRAFYAGGEDALYKLLKDYEYVL
KMSMLLSNSKNLVQFRLNKYFLSHPLSFNVKSFKDFYET

Sequences:

>Translated_359_residues
MDTEFMGIEPNILNNKKRQIEICLNKEDVSKSDNLLNFVNLKHDALSELDFYEIDTSESIFGYDIAMPIFISSMTGGIQE
GNKLNKSLVKIANNLRIPMGLGSFKLIFKYPEYIKYFALRKCADNIPLFSNIGAIQLREFGIFKVIEIIKKLEVDAIIVH
LNSGQELMNSRGDRNFKGIKDSIARLCDASNLPVIVKETGFGISPGCVISLLDLGVSYVDLAGSGGTNWVLVEGIKEENL
NVASCFSNWGISSVLTLLSIKDSFKDRIFASGGYETGIDIAKGIALGAKLVGIASAILRAFYAGGEDALYKLLKDYEYVL
KMSMLLSNSKNLVQFRLNKYFLSHPLSFNVKSFKDFYET
>Mature_359_residues
MDTEFMGIEPNILNNKKRQIEICLNKEDVSKSDNLLNFVNLKHDALSELDFYEIDTSESIFGYDIAMPIFISSMTGGIQE
GNKLNKSLVKIANNLRIPMGLGSFKLIFKYPEYIKYFALRKCADNIPLFSNIGAIQLREFGIFKVIEIIKKLEVDAIIVH
LNSGQELMNSRGDRNFKGIKDSIARLCDASNLPVIVKETGFGISPGCVISLLDLGVSYVDLAGSGGTNWVLVEGIKEENL
NVASCFSNWGISSVLTLLSIKDSFKDRIFASGGYETGIDIAKGIALGAKLVGIASAILRAFYAGGEDALYKLLKDYEYVL
KMSMLLSNSKNLVQFRLNKYFLSHPLSFNVKSFKDFYET

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 39912; Mature: 39912

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTEFMGIEPNILNNKKRQIEICLNKEDVSKSDNLLNFVNLKHDALSELDFYEIDTSESI
CCCCCCCCCCCCCCCCCEEEEEEECHHCCCCCCCCCHHHCCCHHHHHCCCEEEECCCCCE
FGYDIAMPIFISSMTGGIQEGNKLNKSLVKIANNLRIPMGLGSFKLIFKYPEYIKYFALR
EEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEECCCCEEEEECCHHHHHHHHHH
KCADNIPLFSNIGAIQLREFGIFKVIEIIKKLEVDAIIVHLNSGQELMNSRGDRNFKGIK
HHHCCCCCCCCCCCEEEHHCCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCHHH
DSIARLCDASNLPVIVKETGFGISPGCVISLLDLGVSYVDLAGSGGTNWVLVEGIKEENL
HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCC
NVASCFSNWGISSVLTLLSIKDSFKDRIFASGGYETGIDIAKGIALGAKLVGIASAILRA
CHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FYAGGEDALYKLLKDYEYVLKMSMLLSNSKNLVQFRLNKYFLSHPLSFNVKSFKDFYET
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDTEFMGIEPNILNNKKRQIEICLNKEDVSKSDNLLNFVNLKHDALSELDFYEIDTSESI
CCCCCCCCCCCCCCCCCEEEEEEECHHCCCCCCCCCHHHCCCHHHHHCCCEEEECCCCCE
FGYDIAMPIFISSMTGGIQEGNKLNKSLVKIANNLRIPMGLGSFKLIFKYPEYIKYFALR
EEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEECCCCEEEEECCHHHHHHHHHH
KCADNIPLFSNIGAIQLREFGIFKVIEIIKKLEVDAIIVHLNSGQELMNSRGDRNFKGIK
HHHCCCCCCCCCCCEEEHHCCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCHHH
DSIARLCDASNLPVIVKETGFGISPGCVISLLDLGVSYVDLAGSGGTNWVLVEGIKEENL
HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCC
NVASCFSNWGISSVLTLLSIKDSFKDRIFASGGYETGIDIAKGIALGAKLVGIASAILRA
CHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FYAGGEDALYKLLKDYEYVLKMSMLLSNSKNLVQFRLNKYFLSHPLSFNVKSFKDFYET
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA