Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is recG [H]
Identifier: 187918444
GI number: 187918444
Start: 606514
End: 608577
Strand: Direct
Name: recG [H]
Synonym: BH0581
Alternate gene names: 187918444
Gene position: 606514-608577 (Clockwise)
Preceding gene: 187918443
Following gene: 187918446
Centisome position: 65.76
GC content: 30.57
Gene sequence:
>2064_bases GTGTTTTTACATGAATTTAAATATGACCTGCAAGGTATAAGTGGCCTTGGTAAGAAAGGGCTTGAGAGATTAAATAGTCT TCACATTACAAATATCAGAGAACTTATAGAATATTTTCCTAAAAAATATGAGGATCGTAAAAATATAAAAACTTTCCCAG ATTCACTGGAGGTGAGAAATTGCGAACTCATGACAGTTTTTACTGTTTTAGAACATAGAGATTTTGGAAATAATTTTAAA AGGAATTTAAAACTTATAGCTCAGAGTGAAAATAATGAGATATTTGAAATTCTTCTTTTTAATAGGGGATTCTTGGAAGG GGTTTTTAAGGTAGGTCAAAAATTTTATATTTATTCTAAGTTCAATTACAACGATTATACTCAGATGTGGAGTTGCTCTA ATTTTGATAGTGAAGTGTTTAGTTGTAATCCTGAAAGATTTAAAAAAATTATACCAGTTTATTCTCTTAGCGAAGGACTA ACTTCTAAGAAAATATCGTCTTATGTAAAAGAAGCCCTTGTTTATTTTTTAAAGTTTGGGCAGTCAGACGTTCCTGAATT CTTGATAAATAAGTATTCATTGTTGCCCTTTCATGAGGCTTTAAATGAGATTCATTTTCCAAGTTCATTTGAAATGCTTG AAAAGGCAAAAAAGACTTTGATTTATAGGGAGATTTTTTTGCTTCAGTTTTTTTCAAGAGGAAAAAGTTCTGTATTTTTC TTAAGGAAAGAAAGAAATTTACCTAGGAATTTGCTTGATCAAATTATTTTAAAACTTCCATTTAAGCTTACAAAAGATCA AAGAGTTGCAATTGATGAAATAATTAATGATCTTGAAAGTAATAAGCCAATGAATAGATTATTGCAAGGTGATGTTGGAA GTGGGAAAACCATTGTTGCTTTTCTCTCTAGCATTCCTTTAATTGAAGCTGGATATCAAGTTGCGTTGATGGTGCCTACT GATCTTTTGGCGCGGCAACATTATAATAATTTAGCAAATATATTAAAAGATTTTAATGTTTCTATAGCTTTTTTAACTGG TAGTTTAAAAAAGAGAGATAGAGATGAGGTTTTAGAGAAAATTCAAAGTGGAACTTATAGTTTAGTAATTGGAACTCATG CTATTTTTTCTCAGGGAACAAAATTTAAAAGATTAGCTTATATCATTATTGATGAACAGCATAAATTTGGTGTTGAGCAG AGAGAGGAGCTTAAAAATAAGGGAGAGGAGGTTGATGTGCTTTTAATCTCAGCAACTCCTATTCCTAGAAGCTTAGCTTT GACCCTTTTTGGCGATCTTGAGATATCTTTAATTAGAAGAGGTCCTGCAGGTCGAATACCTGTTACTACGTATTTAGCAA AACATGGCAATGAAGAGAAGGTATATGAATTTTTAAAAAATGAACTTGCAAAAGGACATCAGGTTTATTTTGTTTATCCC CTAATATCATCTTCACAGAGGTTTAATTTAAAAGATGCTACTAGTATGTGTTTAAATCTTAAGAATATTTTTGTTGAGTA TTCTGTTGAAATGATTCATTCTAAGCTTGAATCTCATGTTAAGGAAGAGATTATGCATGATTTTTACTTAAAGAGAATAG ATATTTTAGTTGCAACGAGTGTTATTGAAGTTGGTATTGATTGCCCAAATGCGACTTGTATGGTAGTAGAGCATGCTGAG CGTTTTGGACTCTCTACTTTGCATCAGATTAGAGGACGTGTTGGTAGAGGTAGCTTAAAGTCTTTTTTGTTTTTGCTTTA TAAGGAACCTTTAACAGAATCGGGAAAATTTAGACTTAAGACTATAAAGGAAAATATAGATGGATTTAAAATAGCAGAGG AAGATCTTAAATTAAGAGGTCCTGGCAATTTATTTGGTCTTGAGCAAACTGGTTATTTAAAACTTAAGATAGCTGATTTT ATTGAAGATAGAGAAGTTGTAAGATTGATTAGAGAAGAACTTAATATGTTTTCTTTAAATAAGGCTTATTATAATAAATC AGATATTGAATTACTTGATAGTCTTTTACTCTCATATTTAAGATCTGTTGCTAAAGAGAGTTAA
Upstream 100 bases:
>100_bases TTGTGGCAGGAGCATTGTTATTGGCATTTATAATCATTTGTGAGCAAGCTATATGGGCTATTAGTATTCTAGGCTTTTAT TTACCTTTTTAGGAATTTTA
Downstream 100 bases:
>100_bases TATTAATTTGTATATTTTTGAATTAACCGTGAAAGTTCTTTTTTATTTTCATGCCAAAATTTGAGAAGTTTATATTGTAA ATTGTTGAAATATTTTTTTT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 687; Mature: 687
Protein sequence:
>687_residues MFLHEFKYDLQGISGLGKKGLERLNSLHITNIRELIEYFPKKYEDRKNIKTFPDSLEVRNCELMTVFTVLEHRDFGNNFK RNLKLIAQSENNEIFEILLFNRGFLEGVFKVGQKFYIYSKFNYNDYTQMWSCSNFDSEVFSCNPERFKKIIPVYSLSEGL TSKKISSYVKEALVYFLKFGQSDVPEFLINKYSLLPFHEALNEIHFPSSFEMLEKAKKTLIYREIFLLQFFSRGKSSVFF LRKERNLPRNLLDQIILKLPFKLTKDQRVAIDEIINDLESNKPMNRLLQGDVGSGKTIVAFLSSIPLIEAGYQVALMVPT DLLARQHYNNLANILKDFNVSIAFLTGSLKKRDRDEVLEKIQSGTYSLVIGTHAIFSQGTKFKRLAYIIIDEQHKFGVEQ REELKNKGEEVDVLLISATPIPRSLALTLFGDLEISLIRRGPAGRIPVTTYLAKHGNEEKVYEFLKNELAKGHQVYFVYP LISSSQRFNLKDATSMCLNLKNIFVEYSVEMIHSKLESHVKEEIMHDFYLKRIDILVATSVIEVGIDCPNATCMVVEHAE RFGLSTLHQIRGRVGRGSLKSFLFLLYKEPLTESGKFRLKTIKENIDGFKIAEEDLKLRGPGNLFGLEQTGYLKLKIADF IEDREVVRLIREELNMFSLNKAYYNKSDIELLDSLLLSYLRSVAKES
Sequences:
>Translated_687_residues MFLHEFKYDLQGISGLGKKGLERLNSLHITNIRELIEYFPKKYEDRKNIKTFPDSLEVRNCELMTVFTVLEHRDFGNNFK RNLKLIAQSENNEIFEILLFNRGFLEGVFKVGQKFYIYSKFNYNDYTQMWSCSNFDSEVFSCNPERFKKIIPVYSLSEGL TSKKISSYVKEALVYFLKFGQSDVPEFLINKYSLLPFHEALNEIHFPSSFEMLEKAKKTLIYREIFLLQFFSRGKSSVFF LRKERNLPRNLLDQIILKLPFKLTKDQRVAIDEIINDLESNKPMNRLLQGDVGSGKTIVAFLSSIPLIEAGYQVALMVPT DLLARQHYNNLANILKDFNVSIAFLTGSLKKRDRDEVLEKIQSGTYSLVIGTHAIFSQGTKFKRLAYIIIDEQHKFGVEQ REELKNKGEEVDVLLISATPIPRSLALTLFGDLEISLIRRGPAGRIPVTTYLAKHGNEEKVYEFLKNELAKGHQVYFVYP LISSSQRFNLKDATSMCLNLKNIFVEYSVEMIHSKLESHVKEEIMHDFYLKRIDILVATSVIEVGIDCPNATCMVVEHAE RFGLSTLHQIRGRVGRGSLKSFLFLLYKEPLTESGKFRLKTIKENIDGFKIAEEDLKLRGPGNLFGLEQTGYLKLKIADF IEDREVVRLIREELNMFSLNKAYYNKSDIELLDSLLLSYLRSVAKES >Mature_687_residues MFLHEFKYDLQGISGLGKKGLERLNSLHITNIRELIEYFPKKYEDRKNIKTFPDSLEVRNCELMTVFTVLEHRDFGNNFK RNLKLIAQSENNEIFEILLFNRGFLEGVFKVGQKFYIYSKFNYNDYTQMWSCSNFDSEVFSCNPERFKKIIPVYSLSEGL TSKKISSYVKEALVYFLKFGQSDVPEFLINKYSLLPFHEALNEIHFPSSFEMLEKAKKTLIYREIFLLQFFSRGKSSVFF LRKERNLPRNLLDQIILKLPFKLTKDQRVAIDEIINDLESNKPMNRLLQGDVGSGKTIVAFLSSIPLIEAGYQVALMVPT DLLARQHYNNLANILKDFNVSIAFLTGSLKKRDRDEVLEKIQSGTYSLVIGTHAIFSQGTKFKRLAYIIIDEQHKFGVEQ REELKNKGEEVDVLLISATPIPRSLALTLFGDLEISLIRRGPAGRIPVTTYLAKHGNEEKVYEFLKNELAKGHQVYFVYP LISSSQRFNLKDATSMCLNLKNIFVEYSVEMIHSKLESHVKEEIMHDFYLKRIDILVATSVIEVGIDCPNATCMVVEHAE RFGLSTLHQIRGRVGRGSLKSFLFLLYKEPLTESGKFRLKTIKENIDGFKIAEEDLKLRGPGNLFGLEQTGYLKLKIADF IEDREVVRLIREELNMFSLNKAYYNKSDIELLDSLLLSYLRSVAKES
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=671, Percent_Identity=33.3830104321908, Blast_Score=359, Evalue=1e-100, Organism=Escherichia coli, GI1787357, Length=380, Percent_Identity=35.2631578947368, Blast_Score=256, Evalue=3e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 79410; Mature: 79410
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLHEFKYDLQGISGLGKKGLERLNSLHITNIRELIEYFPKKYEDRKNIKTFPDSLEVRN CCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC CELMTVFTVLEHRDFGNNFKRNLKLIAQSENNEIFEILLFNRGFLEGVFKVGQKFYIYSK CHHHHHHHHHHHCCCCCCHHHCEEEEEECCCCCEEEEEECCCHHHHHHHHCCCEEEEEEE FNYNDYTQMWSCSNFDSEVFSCNPERFKKIIPVYSLSEGLTSKKISSYVKEALVYFLKFG CCCCCHHHHCCCCCCCCHHHCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCC QSDVPEFLINKYSLLPFHEALNEIHFPSSFEMLEKAKKTLIYREIFLLQFFSRGKSSVFF CCCCHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LRKERNLPRNLLDQIILKLPFKLTKDQRVAIDEIINDLESNKPMNRLLQGDVGSGKTIVA EECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHH FLSSIPLIEAGYQVALMVPTDLLARQHYNNLANILKDFNVSIAFLTGSLKKRDRDEVLEK HHHCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH IQSGTYSLVIGTHAIFSQGTKFKRLAYIIIDEQHKFGVEQREELKNKGEEVDVLLISATP HHCCCEEEEEECHHHHHCCCCEEEEEEEEEECHHHCCCHHHHHHHCCCCEEEEEEEECCC IPRSLALTLFGDLEISLIRRGPAGRIPVTTYLAKHGNEEKVYEFLKNELAKGHQVYFVYP CCCHHEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEE LISSSQRFNLKDATSMCLNLKNIFVEYSVEMIHSKLESHVKEEIMHDFYLKRIDILVATS EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIEVGIDCPNATCMVVEHAERFGLSTLHQIRGRVGRGSLKSFLFLLYKEPLTESGKFRLK HHHHCCCCCCCEEEEEHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEE TIKENIDGFKIAEEDLKLRGPGNLFGLEQTGYLKLKIADFIEDREVVRLIREELNMFSLN EHHCCCCCCEEECCCCEECCCCCEECCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHEEEH KAYYNKSDIELLDSLLLSYLRSVAKES HHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFLHEFKYDLQGISGLGKKGLERLNSLHITNIRELIEYFPKKYEDRKNIKTFPDSLEVRN CCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC CELMTVFTVLEHRDFGNNFKRNLKLIAQSENNEIFEILLFNRGFLEGVFKVGQKFYIYSK CHHHHHHHHHHHCCCCCCHHHCEEEEEECCCCCEEEEEECCCHHHHHHHHCCCEEEEEEE FNYNDYTQMWSCSNFDSEVFSCNPERFKKIIPVYSLSEGLTSKKISSYVKEALVYFLKFG CCCCCHHHHCCCCCCCCHHHCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCC QSDVPEFLINKYSLLPFHEALNEIHFPSSFEMLEKAKKTLIYREIFLLQFFSRGKSSVFF CCCCHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LRKERNLPRNLLDQIILKLPFKLTKDQRVAIDEIINDLESNKPMNRLLQGDVGSGKTIVA EECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHH FLSSIPLIEAGYQVALMVPTDLLARQHYNNLANILKDFNVSIAFLTGSLKKRDRDEVLEK HHHCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH IQSGTYSLVIGTHAIFSQGTKFKRLAYIIIDEQHKFGVEQREELKNKGEEVDVLLISATP HHCCCEEEEEECHHHHHCCCCEEEEEEEEEECHHHCCCHHHHHHHCCCCEEEEEEEECCC IPRSLALTLFGDLEISLIRRGPAGRIPVTTYLAKHGNEEKVYEFLKNELAKGHQVYFVYP CCCHHEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEE LISSSQRFNLKDATSMCLNLKNIFVEYSVEMIHSKLESHVKEEIMHDFYLKRIDILVATS EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIEVGIDCPNATCMVVEHAERFGLSTLHQIRGRVGRGSLKSFLFLLYKEPLTESGKFRLK HHHHCCCCCCCEEEEEHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEE TIKENIDGFKIAEEDLKLRGPGNLFGLEQTGYLKLKIADFIEDREVVRLIREELNMFSLN EHHCCCCCCEEECCCCEECCCCCEECCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHEEEH KAYYNKSDIELLDSLLLSYLRSVAKES HHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]