Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918229
Identifier: 187918229
GI number: 187918229
Start: 371799
End: 372230
Strand: Direct
Name: 187918229
Synonym: BH0360
Alternate gene names: NA
Gene position: 371799-372230 (Clockwise)
Preceding gene: 187918222
Following gene: 187918230
Centisome position: 40.31
GC content: 27.55
Gene sequence:
>432_bases ATGTTAAAGACAAATAACTCAAAAACAAAAGGAATAATTACAGGTCTCGTTCTCATTTTACAAACAATAGCAAGCACATT AATATTGTCAGCATTATATGGATTTGCTGAGAATACAATGATTGTAAATAACTCTTCTATCAAATTCATGATAGCATTCA TCATATTTTCCCCAGAATTATGTGTATTAATATTAACAACGCACTATATGCTGTATGATCAATTTAAAATCCTTCACAAC TTAATCACAATAACAAAAACCTTTCAAATAGCAATGAGTATTTTGCTTATTATATTGGGATTAGGCCTTGATTTATTATA TGTCTATCAACCATGGTTACTTATTCTCTTAGGCACAATAATAATAACTTATACTATATTTAACGCAGTGATTTTAATTT TAATTAGAGCAAAGGATAAAATAACGGGGTAA
Upstream 100 bases:
>100_bases CCAATACAAAGTATGCAAATACTAAAAATTTCTTTCTCATTGAATAATTCCTACATAAATAAAACTTGATTTTATCTTCA TAATATAATATTTTAAGATT
Downstream 100 bases:
>100_bases AGATTTGATTATCATTCCTGTAGCTAGTGGAAAGGGAGGTGTTGGAAAATCTCTTTTTTCAACAAATATTGCAATTTGTC TTGCAAATGAAGGGAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MLKTNNSKTKGIITGLVLILQTIASTLILSALYGFAENTMIVNNSSIKFMIAFIIFSPELCVLILTTHYMLYDQFKILHN LITITKTFQIAMSILLIILGLGLDLLYVYQPWLLILLGTIIITYTIFNAVILILIRAKDKITG
Sequences:
>Translated_143_residues MLKTNNSKTKGIITGLVLILQTIASTLILSALYGFAENTMIVNNSSIKFMIAFIIFSPELCVLILTTHYMLYDQFKILHN LITITKTFQIAMSILLIILGLGLDLLYVYQPWLLILLGTIIITYTIFNAVILILIRAKDKITG >Mature_143_residues MLKTNNSKTKGIITGLVLILQTIASTLILSALYGFAENTMIVNNSSIKFMIAFIIFSPELCVLILTTHYMLYDQFKILHN LITITKTFQIAMSILLIILGLGLDLLYVYQPWLLILLGTIIITYTIFNAVILILIRAKDKITG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16054; Mature: 16054
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTNNSKTKGIITGLVLILQTIASTLILSALYGFAENTMIVNNSSIKFMIAFIIFSPEL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCHHH CVLILTTHYMLYDQFKILHNLITITKTFQIAMSILLIILGLGLDLLYVYQPWLLILLGTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IITYTIFNAVILILIRAKDKITG HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLKTNNSKTKGIITGLVLILQTIASTLILSALYGFAENTMIVNNSSIKFMIAFIIFSPEL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCHHH CVLILTTHYMLYDQFKILHNLITITKTFQIAMSILLIILGLGLDLLYVYQPWLLILLGTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IITYTIFNAVILILIRAKDKITG HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA