Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918222
Identifier: 187918222
GI number: 187918222
Start: 364560
End: 365675
Strand: Direct
Name: 187918222
Synonym: BH0352
Alternate gene names: NA
Gene position: 364560-365675 (Clockwise)
Preceding gene: 187918219
Following gene: 187918229
Centisome position: 39.53
GC content: 23.39
Gene sequence:
>1116_bases ATGTGCATAAAGAATCCAATTTTAATCATAGTTTTTACTTTAATTTTTAGTTGCTCAAAAAATGATACCATAACTATATT AACTGACAACAAAATTATTCCATTTTACATAAATCAATTCAATATCCAAAATAAAGCAAGTTTTATCATTAAATACAAAG AACATATCAACATACAAACGGCTAATGAAGAGAATGCGCAAGTAATTATCTCAAAAAATATAGACAATATAAATATAACC AAAAATTTTAAAAATATTAAAAAATACTATTATTCAGACTATCCAATATTAAATAATATATCTGAAAAGTTTGCACACAA AATTGTTCCCTTAAGCTTTGATGTTCCAATCTTAATATACAAAAATGAATATAATATACAAAAATATATTGATATACAAA ATATTAAAGAAATACACAAAAGCTTTCAAAAAGAGAAAAAAATTTTTATCTCTCCATACATCTCTGAAAATTTATTTTAC ACCCTATCTGAAATTAATGACATAAACTTTTACTTTGGAAACAACAAACCAGAATATGATGATACAAAAATGTCGGACAT GATAAATCATTTCAAATCTTTCATAGATACAAATGCACTTGTATTACACAAAAACTTCGCAGAAAAATATAAATATTTAG ATTTAGAGAAAATATTACTTCAAAAAAAAACCATTTTAATTGCAGGATTAACTAACTTAACATATTACAATAGCTTAAAT AAAGATACCAGGGACAAAATCAATTTTTCATATCTAACAAATAAGGGGAAAAAAACATCGGTATGCAACATAAACTTTAT GGGAGTTAAAGAAATATCAAAACCTATAGAGAAATTCATTCAATGGATACTAAACCAAGAAATACAAAAATCCCTAATTA AATTTAAAGATAAAACAAAATTCAATGAACATTTTGGATTTGCAAATGGATTTACACCCTATAAAAGCTTAAACTTAAAA TTAAAACACATAATAAAAGAAATACCTTCATTTATTATAGACGAAAATTACATAAACAAAGAGTCGTATATACTCAATAA AAAACAAATAGAAAAAGAAAATCACATGCTCAATGAATTATTTTTGTCTCATATAAACAACACAGAGCCTAAGTAA
Upstream 100 bases:
>100_bases AAATCTTAAGTTCTCAAAGAAACATATAAAATTACAAAATAACTATAAGAATTATACATAATTTATTGTAAAATGGAAGG GAATAGAACAAATAATTTTT
Downstream 100 bases:
>100_bases AGGTCATACTTCTTTATAAGTAACTCGCATTACATGTAATACAATAAAAAATAAGATAGAAAAAATCAGAATAAAAGATA CATATATGTTAACGAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MCIKNPILIIVFTLIFSCSKNDTITILTDNKIIPFYINQFNIQNKASFIIKYKEHINIQTANEENAQVIISKNIDNINIT KNFKNIKKYYYSDYPILNNISEKFAHKIVPLSFDVPILIYKNEYNIQKYIDIQNIKEIHKSFQKEKKIFISPYISENLFY TLSEINDINFYFGNNKPEYDDTKMSDMINHFKSFIDTNALVLHKNFAEKYKYLDLEKILLQKKTILIAGLTNLTYYNSLN KDTRDKINFSYLTNKGKKTSVCNINFMGVKEISKPIEKFIQWILNQEIQKSLIKFKDKTKFNEHFGFANGFTPYKSLNLK LKHIIKEIPSFIIDENYINKESYILNKKQIEKENHMLNELFLSHINNTEPK
Sequences:
>Translated_371_residues MCIKNPILIIVFTLIFSCSKNDTITILTDNKIIPFYINQFNIQNKASFIIKYKEHINIQTANEENAQVIISKNIDNINIT KNFKNIKKYYYSDYPILNNISEKFAHKIVPLSFDVPILIYKNEYNIQKYIDIQNIKEIHKSFQKEKKIFISPYISENLFY TLSEINDINFYFGNNKPEYDDTKMSDMINHFKSFIDTNALVLHKNFAEKYKYLDLEKILLQKKTILIAGLTNLTYYNSLN KDTRDKINFSYLTNKGKKTSVCNINFMGVKEISKPIEKFIQWILNQEIQKSLIKFKDKTKFNEHFGFANGFTPYKSLNLK LKHIIKEIPSFIIDENYINKESYILNKKQIEKENHMLNELFLSHINNTEPK >Mature_371_residues MCIKNPILIIVFTLIFSCSKNDTITILTDNKIIPFYINQFNIQNKASFIIKYKEHINIQTANEENAQVIISKNIDNINIT KNFKNIKKYYYSDYPILNNISEKFAHKIVPLSFDVPILIYKNEYNIQKYIDIQNIKEIHKSFQKEKKIFISPYISENLFY TLSEINDINFYFGNNKPEYDDTKMSDMINHFKSFIDTNALVLHKNFAEKYKYLDLEKILLQKKTILIAGLTNLTYYNSLN KDTRDKINFSYLTNKGKKTSVCNINFMGVKEISKPIEKFIQWILNQEIQKSLIKFKDKTKFNEHFGFANGFTPYKSLNLK LKHIIKEIPSFIIDENYINKESYILNKKQIEKENHMLNELFLSHINNTEPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43975; Mature: 43975
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCIKNPILIIVFTLIFSCSKNDTITILTDNKIIPFYINQFNIQNKASFIIKYKEHINIQT CCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEECCCCCEEEEEEEEHHEEEEE ANEENAQVIISKNIDNINITKNFKNIKKYYYSDYPILNNISEKFAHKIVPLSFDVPILIY CCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHEECEECCCEEEEE KNEYNIQKYIDIQNIKEIHKSFQKEKKIFISPYISENLFYTLSEINDINFYFGNNKPEYD ECCCCHHEEECHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCEEEEEECCCCCCCC DTKMSDMINHFKSFIDTNALVLHKNFAEKYKYLDLEKILLQKKTILIAGLTNLTYYNSLN CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCHHHHHHHHCEEEEEECCHHHEECCCC KDTRDKINFSYLTNKGKKTSVCNINFMGVKEISKPIEKFIQWILNQEIQKSLIKFKDKTK CCHHHHEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FNEHFGFANGFTPYKSLNLKLKHIIKEIPSFIIDENYINKESYILNKKQIEKENHMLNEL HHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHEECHHHHHHHHHHHHHH FLSHINNTEPK HHHHCCCCCCC >Mature Secondary Structure MCIKNPILIIVFTLIFSCSKNDTITILTDNKIIPFYINQFNIQNKASFIIKYKEHINIQT CCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEECCCCCEEEEEEEEHHEEEEE ANEENAQVIISKNIDNINITKNFKNIKKYYYSDYPILNNISEKFAHKIVPLSFDVPILIY CCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHEECEECCCEEEEE KNEYNIQKYIDIQNIKEIHKSFQKEKKIFISPYISENLFYTLSEINDINFYFGNNKPEYD ECCCCHHEEECHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCEEEEEECCCCCCCC DTKMSDMINHFKSFIDTNALVLHKNFAEKYKYLDLEKILLQKKTILIAGLTNLTYYNSLN CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCHHHHHHHHCEEEEEECCHHHEECCCC KDTRDKINFSYLTNKGKKTSVCNINFMGVKEISKPIEKFIQWILNQEIQKSLIKFKDKTK CCHHHHEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FNEHFGFANGFTPYKSLNLKLKHIIKEIPSFIIDENYINKESYILNKKQIEKENHMLNEL HHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHEECHHHHHHHHHHHHHH FLSHINNTEPK HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA