Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is 187918222

Identifier: 187918222

GI number: 187918222

Start: 364560

End: 365675

Strand: Direct

Name: 187918222

Synonym: BH0352

Alternate gene names: NA

Gene position: 364560-365675 (Clockwise)

Preceding gene: 187918219

Following gene: 187918229

Centisome position: 39.53

GC content: 23.39

Gene sequence:

>1116_bases
ATGTGCATAAAGAATCCAATTTTAATCATAGTTTTTACTTTAATTTTTAGTTGCTCAAAAAATGATACCATAACTATATT
AACTGACAACAAAATTATTCCATTTTACATAAATCAATTCAATATCCAAAATAAAGCAAGTTTTATCATTAAATACAAAG
AACATATCAACATACAAACGGCTAATGAAGAGAATGCGCAAGTAATTATCTCAAAAAATATAGACAATATAAATATAACC
AAAAATTTTAAAAATATTAAAAAATACTATTATTCAGACTATCCAATATTAAATAATATATCTGAAAAGTTTGCACACAA
AATTGTTCCCTTAAGCTTTGATGTTCCAATCTTAATATACAAAAATGAATATAATATACAAAAATATATTGATATACAAA
ATATTAAAGAAATACACAAAAGCTTTCAAAAAGAGAAAAAAATTTTTATCTCTCCATACATCTCTGAAAATTTATTTTAC
ACCCTATCTGAAATTAATGACATAAACTTTTACTTTGGAAACAACAAACCAGAATATGATGATACAAAAATGTCGGACAT
GATAAATCATTTCAAATCTTTCATAGATACAAATGCACTTGTATTACACAAAAACTTCGCAGAAAAATATAAATATTTAG
ATTTAGAGAAAATATTACTTCAAAAAAAAACCATTTTAATTGCAGGATTAACTAACTTAACATATTACAATAGCTTAAAT
AAAGATACCAGGGACAAAATCAATTTTTCATATCTAACAAATAAGGGGAAAAAAACATCGGTATGCAACATAAACTTTAT
GGGAGTTAAAGAAATATCAAAACCTATAGAGAAATTCATTCAATGGATACTAAACCAAGAAATACAAAAATCCCTAATTA
AATTTAAAGATAAAACAAAATTCAATGAACATTTTGGATTTGCAAATGGATTTACACCCTATAAAAGCTTAAACTTAAAA
TTAAAACACATAATAAAAGAAATACCTTCATTTATTATAGACGAAAATTACATAAACAAAGAGTCGTATATACTCAATAA
AAAACAAATAGAAAAAGAAAATCACATGCTCAATGAATTATTTTTGTCTCATATAAACAACACAGAGCCTAAGTAA

Upstream 100 bases:

>100_bases
AAATCTTAAGTTCTCAAAGAAACATATAAAATTACAAAATAACTATAAGAATTATACATAATTTATTGTAAAATGGAAGG
GAATAGAACAAATAATTTTT

Downstream 100 bases:

>100_bases
AGGTCATACTTCTTTATAAGTAACTCGCATTACATGTAATACAATAAAAAATAAGATAGAAAAAATCAGAATAAAAGATA
CATATATGTTAACGAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MCIKNPILIIVFTLIFSCSKNDTITILTDNKIIPFYINQFNIQNKASFIIKYKEHINIQTANEENAQVIISKNIDNINIT
KNFKNIKKYYYSDYPILNNISEKFAHKIVPLSFDVPILIYKNEYNIQKYIDIQNIKEIHKSFQKEKKIFISPYISENLFY
TLSEINDINFYFGNNKPEYDDTKMSDMINHFKSFIDTNALVLHKNFAEKYKYLDLEKILLQKKTILIAGLTNLTYYNSLN
KDTRDKINFSYLTNKGKKTSVCNINFMGVKEISKPIEKFIQWILNQEIQKSLIKFKDKTKFNEHFGFANGFTPYKSLNLK
LKHIIKEIPSFIIDENYINKESYILNKKQIEKENHMLNELFLSHINNTEPK

Sequences:

>Translated_371_residues
MCIKNPILIIVFTLIFSCSKNDTITILTDNKIIPFYINQFNIQNKASFIIKYKEHINIQTANEENAQVIISKNIDNINIT
KNFKNIKKYYYSDYPILNNISEKFAHKIVPLSFDVPILIYKNEYNIQKYIDIQNIKEIHKSFQKEKKIFISPYISENLFY
TLSEINDINFYFGNNKPEYDDTKMSDMINHFKSFIDTNALVLHKNFAEKYKYLDLEKILLQKKTILIAGLTNLTYYNSLN
KDTRDKINFSYLTNKGKKTSVCNINFMGVKEISKPIEKFIQWILNQEIQKSLIKFKDKTKFNEHFGFANGFTPYKSLNLK
LKHIIKEIPSFIIDENYINKESYILNKKQIEKENHMLNELFLSHINNTEPK
>Mature_371_residues
MCIKNPILIIVFTLIFSCSKNDTITILTDNKIIPFYINQFNIQNKASFIIKYKEHINIQTANEENAQVIISKNIDNINIT
KNFKNIKKYYYSDYPILNNISEKFAHKIVPLSFDVPILIYKNEYNIQKYIDIQNIKEIHKSFQKEKKIFISPYISENLFY
TLSEINDINFYFGNNKPEYDDTKMSDMINHFKSFIDTNALVLHKNFAEKYKYLDLEKILLQKKTILIAGLTNLTYYNSLN
KDTRDKINFSYLTNKGKKTSVCNINFMGVKEISKPIEKFIQWILNQEIQKSLIKFKDKTKFNEHFGFANGFTPYKSLNLK
LKHIIKEIPSFIIDENYINKESYILNKKQIEKENHMLNELFLSHINNTEPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43975; Mature: 43975

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIKNPILIIVFTLIFSCSKNDTITILTDNKIIPFYINQFNIQNKASFIIKYKEHINIQT
CCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEECCCCCEEEEEEEEHHEEEEE
ANEENAQVIISKNIDNINITKNFKNIKKYYYSDYPILNNISEKFAHKIVPLSFDVPILIY
CCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHEECEECCCEEEEE
KNEYNIQKYIDIQNIKEIHKSFQKEKKIFISPYISENLFYTLSEINDINFYFGNNKPEYD
ECCCCHHEEECHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCEEEEEECCCCCCCC
DTKMSDMINHFKSFIDTNALVLHKNFAEKYKYLDLEKILLQKKTILIAGLTNLTYYNSLN
CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCHHHHHHHHCEEEEEECCHHHEECCCC
KDTRDKINFSYLTNKGKKTSVCNINFMGVKEISKPIEKFIQWILNQEIQKSLIKFKDKTK
CCHHHHEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FNEHFGFANGFTPYKSLNLKLKHIIKEIPSFIIDENYINKESYILNKKQIEKENHMLNEL
HHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHEECHHHHHHHHHHHHHH
FLSHINNTEPK
HHHHCCCCCCC
>Mature Secondary Structure
MCIKNPILIIVFTLIFSCSKNDTITILTDNKIIPFYINQFNIQNKASFIIKYKEHINIQT
CCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEECCCCCEEEEEEEEHHEEEEE
ANEENAQVIISKNIDNINITKNFKNIKKYYYSDYPILNNISEKFAHKIVPLSFDVPILIY
CCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHEECEECCCEEEEE
KNEYNIQKYIDIQNIKEIHKSFQKEKKIFISPYISENLFYTLSEINDINFYFGNNKPEYD
ECCCCHHEEECHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCEEEEEECCCCCCCC
DTKMSDMINHFKSFIDTNALVLHKNFAEKYKYLDLEKILLQKKTILIAGLTNLTYYNSLN
CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCHHHHHHHHCEEEEEECCHHHEECCCC
KDTRDKINFSYLTNKGKKTSVCNINFMGVKEISKPIEKFIQWILNQEIQKSLIKFKDKTK
CCHHHHEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FNEHFGFANGFTPYKSLNLKLKHIIKEIPSFIIDENYINKESYILNKKQIEKENHMLNEL
HHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHEECHHHHHHHHHHHHHH
FLSHINNTEPK
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA