Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is ylxH [H]
Identifier: 187918230
GI number: 187918230
Start: 372235
End: 373368
Strand: Direct
Name: ylxH [H]
Synonym: BH0361
Alternate gene names: 187918230
Gene position: 372235-373368 (Clockwise)
Preceding gene: 187918229
Following gene: 187918231
Centisome position: 40.36
GC content: 27.07
Gene sequence:
>1134_bases TTGATTATCATTCCTGTAGCTAGTGGAAAGGGAGGTGTTGGAAAATCTCTTTTTTCAACAAATATTGCAATTTGTCTTGC AAATGAAGGGAAAAAAGTATTACTTGTCGATCTTGACCTTGGCGGTTCAAATTTACATTCTATGCTTAATATCATACCTA AGAAAAGCATTGGGACTTTCCTTAAAACAAAAATCTCCTTTAAAGATATAATAATAGAATCAGGAATAAAAAATTTAAGC TTTATTGCAGGGGATTCAGATATTCCTGAACTTGCAAATATAGCCATCTTTCAAAAGAAAAAAATAATAAATAACTTAAA ACACCTAAACTATGATTACCTAATAATTGACCTTGGTGCTGGTACAACATTTAATACAATAGACTTCTTTCTAATGTCAA ATCGAGGAGTAATAGTAACAATCCCAACAGTAACAGCAACAATGAATGCCTATTTATTCTTAAAGAACGCAATATTTAGG CTTATGTCAAAAGTATTCACAAAAGAAACAAAAGCATACAAACTAATATCTGACATCAAAAAAGACTCTAGCGATTTACA AAAAATATATATACCTAATTTATTACTTAAAATCGAAACTTATGCTCCTGAAGATTATGAAAAATTTATGAAGATATTCT CACAGTTTAGTCCTTTCATAATATTTAACATGTTAAATAAACCTGATGATATTAAAAAAACCGAAAGAATACTCAAATCT GCAAAAAACTATTTAAATATAAATTTACAAAGCATAGGTTCAATTTACAAAGATGAGCTTATTGATAAAGCATTAAATCA TAAAATACCAATAACTGTTTATAAACCAACAAGCTTAGCTTCCAAAAGTATTAAAAAAATAGCAAAAAAATTAATTGAAC TTGAATCCGTAATAAATGATGTAGAACTATTAAGTGAAGACGATCTAAACGAAAGCTATCATTTTGTAATTAAAGAAGCA CAAGACGAATACCTAGAAAAGTATGCATATCTTGAATCATTGCTAATGAACAAAACAATAGATGATAATGCAATTATTGA TATAATAAAATCTCAACAAAAAGAAATTGCAACATTAAGGAAACAAAACATGATGTTAAAAAAAAAGTTATTTGCACAAT TAAAAAAAGACTAA
Upstream 100 bases:
>100_bases TTACTTATTCTCTTAGGCACAATAATAATAACTTATACTATATTTAACGCAGTGATTTTAATTTTAATTAGAGCAAAGGA TAAAATAACGGGGTAAAGAT
Downstream 100 bases:
>100_bases GGAGAAAAAAATGCCTAATTATATAAATTATCCTAGCTGGTTACATCCTGAAATAATTAAAGGAATTCCAATTACATGGT ATAGTCTATCCTACATTATC
Product: ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MIIIPVASGKGGVGKSLFSTNIAICLANEGKKVLLVDLDLGGSNLHSMLNIIPKKSIGTFLKTKISFKDIIIESGIKNLS FIAGDSDIPELANIAIFQKKKIINNLKHLNYDYLIIDLGAGTTFNTIDFFLMSNRGVIVTIPTVTATMNAYLFLKNAIFR LMSKVFTKETKAYKLISDIKKDSSDLQKIYIPNLLLKIETYAPEDYEKFMKIFSQFSPFIIFNMLNKPDDIKKTERILKS AKNYLNINLQSIGSIYKDELIDKALNHKIPITVYKPTSLASKSIKKIAKKLIELESVINDVELLSEDDLNESYHFVIKEA QDEYLEKYAYLESLLMNKTIDDNAIIDIIKSQQKEIATLRKQNMMLKKKLFAQLKKD
Sequences:
>Translated_377_residues MIIIPVASGKGGVGKSLFSTNIAICLANEGKKVLLVDLDLGGSNLHSMLNIIPKKSIGTFLKTKISFKDIIIESGIKNLS FIAGDSDIPELANIAIFQKKKIINNLKHLNYDYLIIDLGAGTTFNTIDFFLMSNRGVIVTIPTVTATMNAYLFLKNAIFR LMSKVFTKETKAYKLISDIKKDSSDLQKIYIPNLLLKIETYAPEDYEKFMKIFSQFSPFIIFNMLNKPDDIKKTERILKS AKNYLNINLQSIGSIYKDELIDKALNHKIPITVYKPTSLASKSIKKIAKKLIELESVINDVELLSEDDLNESYHFVIKEA QDEYLEKYAYLESLLMNKTIDDNAIIDIIKSQQKEIATLRKQNMMLKKKLFAQLKKD >Mature_377_residues MIIIPVASGKGGVGKSLFSTNIAICLANEGKKVLLVDLDLGGSNLHSMLNIIPKKSIGTFLKTKISFKDIIIESGIKNLS FIAGDSDIPELANIAIFQKKKIINNLKHLNYDYLIIDLGAGTTFNTIDFFLMSNRGVIVTIPTVTATMNAYLFLKNAIFR LMSKVFTKETKAYKLISDIKKDSSDLQKIYIPNLLLKIETYAPEDYEKFMKIFSQFSPFIIFNMLNKPDDIKKTERILKS AKNYLNINLQSIGSIYKDELIDKALNHKIPITVYKPTSLASKSIKKIAKKLIELESVINDVELLSEDDLNESYHFVIKEA QDEYLEKYAYLESLLMNKTIDDNAIIDIIKSQQKEIATLRKQNMMLKKKLFAQLKKD
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 42744; Mature: 42744
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIIPVASGKGGVGKSLFSTNIAICLANEGKKVLLVDLDLGGSNLHSMLNIIPKKSIGTF CEEEEECCCCCCCCHHHHHCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHH LKTKISFKDIIIESGIKNLSFIAGDSDIPELANIAIFQKKKIINNLKHLNYDYLIIDLGA HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC GTTFNTIDFFLMSNRGVIVTIPTVTATMNAYLFLKNAIFRLMSKVFTKETKAYKLISDIK CCEEHHEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDSSDLQKIYIPNLLLKIETYAPEDYEKFMKIFSQFSPFIIFNMLNKPDDIKKTERILKS CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH AKNYLNINLQSIGSIYKDELIDKALNHKIPITVYKPTSLASKSIKKIAKKLIELESVIND HHHHEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH VELLSEDDLNESYHFVIKEAQDEYLEKYAYLESLLMNKTIDDNAIIDIIKSQQKEIATLR HHHHCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KQNMMLKKKLFAQLKKD HHHHHHHHHHHHHHCCC >Mature Secondary Structure MIIIPVASGKGGVGKSLFSTNIAICLANEGKKVLLVDLDLGGSNLHSMLNIIPKKSIGTF CEEEEECCCCCCCCHHHHHCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHH LKTKISFKDIIIESGIKNLSFIAGDSDIPELANIAIFQKKKIINNLKHLNYDYLIIDLGA HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC GTTFNTIDFFLMSNRGVIVTIPTVTATMNAYLFLKNAIFRLMSKVFTKETKAYKLISDIK CCEEHHEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDSSDLQKIYIPNLLLKIETYAPEDYEKFMKIFSQFSPFIIFNMLNKPDDIKKTERILKS CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH AKNYLNINLQSIGSIYKDELIDKALNHKIPITVYKPTSLASKSIKKIAKKLIELESVIND HHHHEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH VELLSEDDLNESYHFVIKEAQDEYLEKYAYLESLLMNKTIDDNAIIDIIKSQQKEIATLR HHHHCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KQNMMLKKKLFAQLKKD HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]