Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918083
Identifier: 187918083
GI number: 187918083
Start: 212137
End: 214491
Strand: Direct
Name: 187918083
Synonym: BH0210
Alternate gene names: NA
Gene position: 212137-214491 (Clockwise)
Preceding gene: 187918082
Following gene: 187918084
Centisome position: 23.0
GC content: 27.3
Gene sequence:
>2355_bases ATGAATAAAAGAAAAAATTTACCCATACTAATAATTTTGATCATATTACTTATTGCTTCATTTGGGGGCCTTGGTTATTA CGTATATAAAGAACGACTCAATAAAAACAATCAAGAAATAATGCTAAACGAAGTAAAAAATAGTATTATGGATAGAAATT ACAAAAAAGCACACTCAATAACAAAAATTCTAAAAGACAAATATCCACAAAACACAGATATTGCAATGCTTGAGAATACT CTCTCAGAACTTGCAAATAACAGTCCTTTTGAATCAAAAAATTTACAAAGAGATACTGCCAATCAAATACTAGACAAAAT ACAAGGAAAAGAACAATTAATACCTATTAACAATGAAAATTCCGAAATTGCTTTTAATAATCGATATATCAAAGACACTA CAAAAATAGAAAATTATGCTGATAGAAAAGATGATATTGGAATTAAAAATGAAGACATTCTAGAATTCAACCAAAATACA GTACCTGAAAACCTAAGCAACAACACAAGTAAAATAGTAAAACAACAAGAATCAAACCTAAACAGCAATAAATCTATTGA AAATCAAAAAAATCTATTTAACTTAAAAAAACTAAAAGAAAATCTCAATAAAGAATTAAATCAAACCAAAACCATTCAGT TAAACACTCCGAACAAAATCATCAAAAAACACAAACAAAACGAAGATAAACTTATAGAAAAGAATACAGACTTTAAAGAA AATAAAACAAAACAAATTGACAAAGTTAACAAAATCCCTCCTACTTTAAAACCAAAAACTAAAATAGAAAGCACAAACAC AAAAAATGCTACCAAAAATCAAATAATCGAAAAAATAGAGAGACCTTATAGCTATGTAATAAAAAAAGTACTCTACGAAA TATTAGATAACATTAATACTGGCAATCCCTCTCTTGCGAAAGAAAGACTTAATGAGCTTATTAAAAAAGGGTTGAGTCAT AAATTCAATAAAGTTAATGACTTAATTGACAAACTAAAAAACCAAGAAGCGGCCAATCTCTTAATTAAATTAATAAAACA AGATATCGAACCAAATTCAACTGGCACAGAAAAAGCTCCTTTCAACAAGGAGCTTTTAAAACAAGAACACCCCAAAGAAA AAATTTCTCCCATAAAAGACCAGTCAATAGATAATCAAATAAAGATGGAAGAAGAACCTAAAACATATGCAAACCATCTT AGGCAAGCCTCAACAGATTTACAATCTCTTAAAATGCTAGCATCAACAAATGAGGAACAGAAAGACTTCAAAAAGGCTGA AGAAATTTATGAAAAAATTGTAAGTATTACAAATAACGCAGAAGATCACTACAAAGTTGGAATAATAAAATTTAAACTTA AAAAATATGAAGAAGCAATAAAAGCATTTGGTAAAACAATATCACTAAATCCAAAGCACAAAAAAGCATATACAAATAAA GGAACAAGCTTAATATTATCAAATAAACCAAAACAAGCAATTGAGGCTTTCAAAAAGGCAATTACAATTGACAAAAATTA TGATAATGCCTACTACAAAAAAGGAATAGCAGAAGAACAAAACGATGATAAACAAAACGCTTTCTTAAGTTTCAAAAAAG CTTATGGGATTACAAAAAATCCTCATTACGCTTTAAAAGCAGGAATTATTGCAAATCATATTGGGGATTTTAAAAACAGT GAGAAATACCTAGACAAGGCAAGAGCTTCAATAAAAGAAAAAAACGATATTATGCTTTATAATCTAGCAATAGCAAAATT TGAAAATAATAATCTTAATGAATCACTAAAAACCATCAATCAAGCTCTTGTCATAAATCCAAAAAAACCCGAATATTTAT ATTTAAAAGCATCCATTTACCTAACTAAAGAAAATTATAATGAAGCAATACCACTCTACAACGCTGTAATTTTAAAAAAC CCTGATAATATTACGGCACATATCAATTTAGCAAGAGCATATGAAAAATCAGGCAATGAACTAAAAGCAATTGAAATCCT TGAAAAAATTAGCAATAAAAATCATTTACTAGCATTAAACAATCTTGGCATACTTTATAAAAACCAAAAAAACTATCAAA AAGCAATAAAAATTTTTCAAAAAGCAGAAGCTCTCTCAAGTCTTGAAGCAAAATATAATCTTGCAACTACCTTTCTTGCT CTTAAAGATAATAAAAGGGCCATGGAAAAATTAAAAGAATATATCAAAATAAATCCAAACAACCCAGAAGCTCTACATGC ATTAGGTACAATAGAATATAATGATAATGGAAGTGACAAAATACTTAAAGAAGTGATTAACAAATTTCCTAATTACAAAC AAAATAAAACAATAATGAAAATAATAGGCAAATGA
Upstream 100 bases:
>100_bases AAAAACAAGCCTGCAGATAAAGACAAATTTAAAGATAATTTAAAAACAGATTCTTTAATTGAATTAGACAAAATTAATTG GCAAGAGGAGTTAAATATAG
Downstream 100 bases:
>100_bases ACAAAATAAAATTTTTAGACAAAAGTCTAGTACAAAAAATAGCAGCAGGAGAAGCCATAGACAGGCCTTGTTCTATTTTA AGAGAATTACTTGACAATGC
Product: surface-located membrane protein 1
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; Surface-Located Membrane; Tetratricopeptide Repeat Family; Peptidase; O-Linked N-Acetylglucosamine Transferase; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; O-Linked GlcNAc Transferase; Tetratricopeptide Protein; TPR Repeat Protein; Serine/Threonine Protein Kinase With TPR Repeats; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeat-Containing Methyltransferase; Serine/Threonine Protein Kinase; TPR Repeat-Containing Protein Kinase; Glycosyl Transferase Family Protein; Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MNKRKNLPILIILIILLIASFGGLGYYVYKERLNKNNQEIMLNEVKNSIMDRNYKKAHSITKILKDKYPQNTDIAMLENT LSELANNSPFESKNLQRDTANQILDKIQGKEQLIPINNENSEIAFNNRYIKDTTKIENYADRKDDIGIKNEDILEFNQNT VPENLSNNTSKIVKQQESNLNSNKSIENQKNLFNLKKLKENLNKELNQTKTIQLNTPNKIIKKHKQNEDKLIEKNTDFKE NKTKQIDKVNKIPPTLKPKTKIESTNTKNATKNQIIEKIERPYSYVIKKVLYEILDNINTGNPSLAKERLNELIKKGLSH KFNKVNDLIDKLKNQEAANLLIKLIKQDIEPNSTGTEKAPFNKELLKQEHPKEKISPIKDQSIDNQIKMEEEPKTYANHL RQASTDLQSLKMLASTNEEQKDFKKAEEIYEKIVSITNNAEDHYKVGIIKFKLKKYEEAIKAFGKTISLNPKHKKAYTNK GTSLILSNKPKQAIEAFKKAITIDKNYDNAYYKKGIAEEQNDDKQNAFLSFKKAYGITKNPHYALKAGIIANHIGDFKNS EKYLDKARASIKEKNDIMLYNLAIAKFENNNLNESLKTINQALVINPKKPEYLYLKASIYLTKENYNEAIPLYNAVILKN PDNITAHINLARAYEKSGNELKAIEILEKISNKNHLLALNNLGILYKNQKNYQKAIKIFQKAEALSSLEAKYNLATTFLA LKDNKRAMEKLKEYIKINPNNPEALHALGTIEYNDNGSDKILKEVINKFPNYKQNKTIMKIIGK
Sequences:
>Translated_784_residues MNKRKNLPILIILIILLIASFGGLGYYVYKERLNKNNQEIMLNEVKNSIMDRNYKKAHSITKILKDKYPQNTDIAMLENT LSELANNSPFESKNLQRDTANQILDKIQGKEQLIPINNENSEIAFNNRYIKDTTKIENYADRKDDIGIKNEDILEFNQNT VPENLSNNTSKIVKQQESNLNSNKSIENQKNLFNLKKLKENLNKELNQTKTIQLNTPNKIIKKHKQNEDKLIEKNTDFKE NKTKQIDKVNKIPPTLKPKTKIESTNTKNATKNQIIEKIERPYSYVIKKVLYEILDNINTGNPSLAKERLNELIKKGLSH KFNKVNDLIDKLKNQEAANLLIKLIKQDIEPNSTGTEKAPFNKELLKQEHPKEKISPIKDQSIDNQIKMEEEPKTYANHL RQASTDLQSLKMLASTNEEQKDFKKAEEIYEKIVSITNNAEDHYKVGIIKFKLKKYEEAIKAFGKTISLNPKHKKAYTNK GTSLILSNKPKQAIEAFKKAITIDKNYDNAYYKKGIAEEQNDDKQNAFLSFKKAYGITKNPHYALKAGIIANHIGDFKNS EKYLDKARASIKEKNDIMLYNLAIAKFENNNLNESLKTINQALVINPKKPEYLYLKASIYLTKENYNEAIPLYNAVILKN PDNITAHINLARAYEKSGNELKAIEILEKISNKNHLLALNNLGILYKNQKNYQKAIKIFQKAEALSSLEAKYNLATTFLA LKDNKRAMEKLKEYIKINPNNPEALHALGTIEYNDNGSDKILKEVINKFPNYKQNKTIMKIIGK >Mature_784_residues MNKRKNLPILIILIILLIASFGGLGYYVYKERLNKNNQEIMLNEVKNSIMDRNYKKAHSITKILKDKYPQNTDIAMLENT LSELANNSPFESKNLQRDTANQILDKIQGKEQLIPINNENSEIAFNNRYIKDTTKIENYADRKDDIGIKNEDILEFNQNT VPENLSNNTSKIVKQQESNLNSNKSIENQKNLFNLKKLKENLNKELNQTKTIQLNTPNKIIKKHKQNEDKLIEKNTDFKE NKTKQIDKVNKIPPTLKPKTKIESTNTKNATKNQIIEKIERPYSYVIKKVLYEILDNINTGNPSLAKERLNELIKKGLSH KFNKVNDLIDKLKNQEAANLLIKLIKQDIEPNSTGTEKAPFNKELLKQEHPKEKISPIKDQSIDNQIKMEEEPKTYANHL RQASTDLQSLKMLASTNEEQKDFKKAEEIYEKIVSITNNAEDHYKVGIIKFKLKKYEEAIKAFGKTISLNPKHKKAYTNK GTSLILSNKPKQAIEAFKKAITIDKNYDNAYYKKGIAEEQNDDKQNAFLSFKKAYGITKNPHYALKAGIIANHIGDFKNS EKYLDKARASIKEKNDIMLYNLAIAKFENNNLNESLKTINQALVINPKKPEYLYLKASIYLTKENYNEAIPLYNAVILKN PDNITAHINLARAYEKSGNELKAIEILEKISNKNHLLALNNLGILYKNQKNYQKAIKIFQKAEALSSLEAKYNLATTFLA LKDNKRAMEKLKEYIKINPNNPEALHALGTIEYNDNGSDKILKEVINKFPNYKQNKTIMKIIGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90260; Mature: 90260
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRKNLPILIILIILLIASFGGLGYYVYKERLNKNNQEIMLNEVKNSIMDRNYKKAHSI CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH TKILKDKYPQNTDIAMLENTLSELANNSPFESKNLQRDTANQILDKIQGKEQLIPINNEN HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCC SEIAFNNRYIKDTTKIENYADRKDDIGIKNEDILEFNQNTVPENLSNNTSKIVKQQESNL CEEEECCCEECCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCC NSNKSIENQKNLFNLKKLKENLNKELNQTKTIQLNTPNKIIKKHKQNEDKLIEKNTDFKE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCHHHHHCCCCCCC NKTKQIDKVNKIPPTLKPKTKIESTNTKNATKNQIIEKIERPYSYVIKKVLYEILDNINT CHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC GNPSLAKERLNELIKKGLSHKFNKVNDLIDKLKNQEAANLLIKLIKQDIEPNSTGTEKAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC FNKELLKQEHPKEKISPIKDQSIDNQIKMEEEPKTYANHLRQASTDLQSLKMLASTNEEQ CCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH KDFKKAEEIYEKIVSITNNAEDHYKVGIIKFKLKKYEEAIKAFGKTISLNPKHKKAYTNK HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHCCCEECCCCCHHHHHCCC GTSLILSNKPKQAIEAFKKAITIDKNYDNAYYKKGIAEEQNDDKQNAFLSFKKAYGITKN CCEEEECCCCHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC PHYALKAGIIANHIGDFKNSEKYLDKARASIKEKNDIMLYNLAIAKFENNNLNESLKTIN CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHH QALVINPKKPEYLYLKASIYLTKENYNEAIPLYNAVILKNPDNITAHINLARAYEKSGNE HHEEECCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEHHHHHHCCCCC LKAIEILEKISNKNHLLALNNLGILYKNQKNYQKAIKIFQKAEALSSLEAKYNLATTFLA HHHHHHHHHHCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE LKDNKRAMEKLKEYIKINPNNPEALHALGTIEYNDNGSDKILKEVINKFPNYKQNKTIMK ECCCHHHHHHHHHHEEECCCCCHHHHEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHH IIGK HHCC >Mature Secondary Structure MNKRKNLPILIILIILLIASFGGLGYYVYKERLNKNNQEIMLNEVKNSIMDRNYKKAHSI CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH TKILKDKYPQNTDIAMLENTLSELANNSPFESKNLQRDTANQILDKIQGKEQLIPINNEN HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCC SEIAFNNRYIKDTTKIENYADRKDDIGIKNEDILEFNQNTVPENLSNNTSKIVKQQESNL CEEEECCCEECCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCC NSNKSIENQKNLFNLKKLKENLNKELNQTKTIQLNTPNKIIKKHKQNEDKLIEKNTDFKE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCHHHHHCCCCCCC NKTKQIDKVNKIPPTLKPKTKIESTNTKNATKNQIIEKIERPYSYVIKKVLYEILDNINT CHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC GNPSLAKERLNELIKKGLSHKFNKVNDLIDKLKNQEAANLLIKLIKQDIEPNSTGTEKAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC FNKELLKQEHPKEKISPIKDQSIDNQIKMEEEPKTYANHLRQASTDLQSLKMLASTNEEQ CCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH KDFKKAEEIYEKIVSITNNAEDHYKVGIIKFKLKKYEEAIKAFGKTISLNPKHKKAYTNK HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHCCCEECCCCCHHHHHCCC GTSLILSNKPKQAIEAFKKAITIDKNYDNAYYKKGIAEEQNDDKQNAFLSFKKAYGITKN CCEEEECCCCHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC PHYALKAGIIANHIGDFKNSEKYLDKARASIKEKNDIMLYNLAIAKFENNNLNESLKTIN CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHH QALVINPKKPEYLYLKASIYLTKENYNEAIPLYNAVILKNPDNITAHINLARAYEKSGNE HHEEECCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEHHHHHHCCCCC LKAIEILEKISNKNHLLALNNLGILYKNQKNYQKAIKIFQKAEALSSLEAKYNLATTFLA HHHHHHHHHHCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE LKDNKRAMEKLKEYIKINPNNPEALHALGTIEYNDNGSDKILKEVINKFPNYKQNKTIMK ECCCHHHHHHHHHHEEECCCCCHHHHEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHH IIGK HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA