Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is mutL [H]
Identifier: 187918084
GI number: 187918084
Start: 214488
End: 216326
Strand: Direct
Name: mutL [H]
Synonym: BH0211
Alternate gene names: 187918084
Gene position: 214488-216326 (Clockwise)
Preceding gene: 187918083
Following gene: 187918085
Centisome position: 23.26
GC content: 29.04
Gene sequence:
>1839_bases ATGAACAAAATAAAATTTTTAGACAAAAGTCTAGTACAAAAAATAGCAGCAGGAGAAGCCATAGACAGGCCTTGTTCTAT TTTAAGAGAATTACTTGACAATGCAATAGATTCTGGAGCGGATAAAATCGAAGTTTTTATTGAAGAAGGTGGTATTCGAA GAATACTAATAACAGATAATGGTAGCGGAATAAGCAGAGAAGACTTAAAAATATGTTACCTACCCCACACTACTTCAAAA ATAAATGAAGAACAAGACCTTGAAAAAATCCAAACACTAGGATTTAGAGGAGAAGCTCTCTCAAGCATTGCCATTTGTTC AAATCTCACAATAACAAGTTCAACTACAGGAGAAGACAGCTACCAAATTGAAGTTGAAAATGGAACTGAAAAGTATTTTA AAAAACAATCCGCAATAAATGGAACAATAGTAGATGTTACAAATTTATTTCACAATTTTCCAGCAAGAAAAAGATTCTTA AAAAAAGACTCTATCGAGACAAAAATGTGTTTAAAAGTTTTTGAAGAAAAGGCTGTCACTCATCCTGGTATTGACTTTAA ATTAAATATAAACAATGAATTGAGAAAAGTTTACTTTAAAGAAAGCTTAATAGATAGGGTTCAAAGTGTATATGGAGAAA TAATAGATAACAATAAATTTGGAAAAATAGAAGCAGAATATGAAAATATACAAATGAAGATCTTTTTTGCTCCACCCAAC TTCTCAAGGAAAGACAAACGAAACATAAAAATCTTCGTCAATAGAAGACCTGTTGAAGAGAAAAACCTATCTGAAGCAAT AATTGATGGACATAGCAGAATACTAACTAATAGAAATTTTCCAGTATGTTACCTATTCTTAGAAATAGATCCCAGATACA TCGATTTCAATATACACCCTCAAAAAAAAGAAGTAAGATTTTTTAACTTGCCATTTCTTCCTAAACAAATTGCAAGCAAT ATTAATGAATTCTTTGACAGAGGGCAAAAAGAAATTTTACAAGACTACCATAACATAATAATCAAAAGGCAACTAACAAA TGATGATCATCTATTACACACTGAGGATGATCCAACAAACTCAGATTTTCAAGCTTATAAAATCACACAAAACGAAGCAT TAACTTTAGACAAGCCTCAAAACAATAAAATAACAAACATAATAGAAGACAAGGTAAAATTTGAAAGTCAACCCCCAACT CAAAAAGATAAACCATCATTCAAAAACTACATACAAAATATTTTTCTAAAAACTTCCACAATGCTAAATGATTTACAAAA ACCAATAGAAAAACATGAATTTAAATACATAGGACAACTATTTTCGGAATTTTTAATAGTAGAAAGCGATAATGAAGTTT ACTTCATAGATCAACACGCACTTCATGAAAAAATTATATATCAAATCCTAATAAAATCAGAAAAAATTATTCAAAAACTT CTAGTACCAATTGAGTTTCAAGTAGACTGTGAAGATAAAGATAAAATACTAGCAAGCGAATTGGAAGAATATAAAAAAAT AGATATTACAGTTAACAAAATAAAGGAGCAAACTTATCAACTCGAATCAATTCCCAATATCTGTAACAAGTATGAAAGTG TTATCATTCAATTTCTAAAGACAAGAAAAAGCAAAACAATTGATTCTCTAGAAGCCGACTTATATGCAACTATTGCATGT AGACAAGCCATTAAACGCAATGATACAATAAGTTCTGAATTTAGTCAATTTTTAATAAACGAATTTTTCAATCTCAAGCT AAAACATTGTCCACATGGAAGAAAAATTTACCATAAAATCTCTAAATTTGAGCTTGAAAAAAATGTTAACAGAAAATAA
Upstream 100 bases:
>100_bases TAGAATATAATGATAATGGAAGTGACAAAATACTTAAAGAAGTGATTAACAAATTTCCTAATTACAAACAAAATAAAACA ATAATGAAAATAATAGGCAA
Downstream 100 bases:
>100_bases AATAAACATGGAAGCCGGTAATGATAAAAACTCTTAAATCGAAAATTAAAAAACTAATACCACAAAGAGATAAAAAATTA GTTGAACTTGGGAAGGCGCT
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 612; Mature: 612
Protein sequence:
>612_residues MNKIKFLDKSLVQKIAAGEAIDRPCSILRELLDNAIDSGADKIEVFIEEGGIRRILITDNGSGISREDLKICYLPHTTSK INEEQDLEKIQTLGFRGEALSSIAICSNLTITSSTTGEDSYQIEVENGTEKYFKKQSAINGTIVDVTNLFHNFPARKRFL KKDSIETKMCLKVFEEKAVTHPGIDFKLNINNELRKVYFKESLIDRVQSVYGEIIDNNKFGKIEAEYENIQMKIFFAPPN FSRKDKRNIKIFVNRRPVEEKNLSEAIIDGHSRILTNRNFPVCYLFLEIDPRYIDFNIHPQKKEVRFFNLPFLPKQIASN INEFFDRGQKEILQDYHNIIIKRQLTNDDHLLHTEDDPTNSDFQAYKITQNEALTLDKPQNNKITNIIEDKVKFESQPPT QKDKPSFKNYIQNIFLKTSTMLNDLQKPIEKHEFKYIGQLFSEFLIVESDNEVYFIDQHALHEKIIYQILIKSEKIIQKL LVPIEFQVDCEDKDKILASELEEYKKIDITVNKIKEQTYQLESIPNICNKYESVIIQFLKTRKSKTIDSLEADLYATIAC RQAIKRNDTISSEFSQFLINEFFNLKLKHCPHGRKIYHKISKFELEKNVNRK
Sequences:
>Translated_612_residues MNKIKFLDKSLVQKIAAGEAIDRPCSILRELLDNAIDSGADKIEVFIEEGGIRRILITDNGSGISREDLKICYLPHTTSK INEEQDLEKIQTLGFRGEALSSIAICSNLTITSSTTGEDSYQIEVENGTEKYFKKQSAINGTIVDVTNLFHNFPARKRFL KKDSIETKMCLKVFEEKAVTHPGIDFKLNINNELRKVYFKESLIDRVQSVYGEIIDNNKFGKIEAEYENIQMKIFFAPPN FSRKDKRNIKIFVNRRPVEEKNLSEAIIDGHSRILTNRNFPVCYLFLEIDPRYIDFNIHPQKKEVRFFNLPFLPKQIASN INEFFDRGQKEILQDYHNIIIKRQLTNDDHLLHTEDDPTNSDFQAYKITQNEALTLDKPQNNKITNIIEDKVKFESQPPT QKDKPSFKNYIQNIFLKTSTMLNDLQKPIEKHEFKYIGQLFSEFLIVESDNEVYFIDQHALHEKIIYQILIKSEKIIQKL LVPIEFQVDCEDKDKILASELEEYKKIDITVNKIKEQTYQLESIPNICNKYESVIIQFLKTRKSKTIDSLEADLYATIAC RQAIKRNDTISSEFSQFLINEFFNLKLKHCPHGRKIYHKISKFELEKNVNRK >Mature_612_residues MNKIKFLDKSLVQKIAAGEAIDRPCSILRELLDNAIDSGADKIEVFIEEGGIRRILITDNGSGISREDLKICYLPHTTSK INEEQDLEKIQTLGFRGEALSSIAICSNLTITSSTTGEDSYQIEVENGTEKYFKKQSAINGTIVDVTNLFHNFPARKRFL KKDSIETKMCLKVFEEKAVTHPGIDFKLNINNELRKVYFKESLIDRVQSVYGEIIDNNKFGKIEAEYENIQMKIFFAPPN FSRKDKRNIKIFVNRRPVEEKNLSEAIIDGHSRILTNRNFPVCYLFLEIDPRYIDFNIHPQKKEVRFFNLPFLPKQIASN INEFFDRGQKEILQDYHNIIIKRQLTNDDHLLHTEDDPTNSDFQAYKITQNEALTLDKPQNNKITNIIEDKVKFESQPPT QKDKPSFKNYIQNIFLKTSTMLNDLQKPIEKHEFKYIGQLFSEFLIVESDNEVYFIDQHALHEKIIYQILIKSEKIIQKL LVPIEFQVDCEDKDKILASELEEYKKIDITVNKIKEQTYQLESIPNICNKYESVIIQFLKTRKSKTIDSLEADLYATIAC RQAIKRNDTISSEFSQFLINEFFNLKLKHCPHGRKIYHKISKFELEKNVNRK
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=313, Percent_Identity=35.7827476038339, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI4505911, Length=324, Percent_Identity=29.0123456790123, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI189458898, Length=324, Percent_Identity=29.0123456790123, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI189458896, Length=315, Percent_Identity=28.2539682539683, Blast_Score=109, Evalue=1e-23, Organism=Homo sapiens, GI310128478, Length=360, Percent_Identity=23.8888888888889, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI4505913, Length=339, Percent_Identity=24.4837758112094, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI263191589, Length=219, Percent_Identity=31.5068493150685, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI310128480, Length=292, Percent_Identity=23.972602739726, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI91992162, Length=274, Percent_Identity=27.007299270073, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI91992160, Length=274, Percent_Identity=27.007299270073, Blast_Score=67, Evalue=7e-11, Organism=Escherichia coli, GI1790612, Length=515, Percent_Identity=26.4077669902913, Blast_Score=176, Evalue=4e-45, Organism=Caenorhabditis elegans, GI71991825, Length=326, Percent_Identity=29.7546012269939, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17562796, Length=340, Percent_Identity=25, Blast_Score=113, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6323819, Length=331, Percent_Identity=35.3474320241692, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6324247, Length=360, Percent_Identity=29.4444444444444, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6325093, Length=289, Percent_Identity=25.2595155709343, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323063, Length=327, Percent_Identity=28.7461773700306, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI17136968, Length=318, Percent_Identity=33.6477987421384, Blast_Score=165, Evalue=1e-40, Organism=Drosophila melanogaster, GI17136970, Length=174, Percent_Identity=36.2068965517241, Blast_Score=101, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 71441; Mature: 71441
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1 ; PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIKFLDKSLVQKIAAGEAIDRPCSILRELLDNAIDSGADKIEVFIEEGGIRRILITDN CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEECC GSGISREDLKICYLPHTTSKINEEQDLEKIQTLGFRGEALSSIAICSNLTITSSTTGEDS CCCCCCCCCEEEEECCCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCC YQIEVENGTEKYFKKQSAINGTIVDVTNLFHNFPARKRFLKKDSIETKMCLKVFEEKAVT EEEEECCCHHHHHHHHHCCCCEEEEHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCC HPGIDFKLNINNELRKVYFKESLIDRVQSVYGEIIDNNKFGKIEAEYENIQMKIFFAPPN CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCC FSRKDKRNIKIFVNRRPVEEKNLSEAIIDGHSRILTNRNFPVCYLFLEIDPRYIDFNIHP CCCCCCCCEEEEEECCCCCCCCHHHHHHCCCHHEEECCCCCEEEEEEEECCEEEEEEECC QKKEVRFFNLPFLPKQIASNINEFFDRGQKEILQDYHNIIIKRQLTNDDHLLHTEDDPTN CCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCEEECCCCCCC SDFQAYKITQNEALTLDKPQNNKITNIIEDKVKFESQPPTQKDKPSFKNYIQNIFLKTST CCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH MLNDLQKPIEKHEFKYIGQLFSEFLIVESDNEVYFIDQHALHEKIIYQILIKSEKIIQKL HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH LVPIEFQVDCEDKDKILASELEEYKKIDITVNKIKEQTYQLESIPNICNKYESVIIQFLK HCCCEEEECCCCHHHHHHHHHHHHHEECEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRKSKTIDSLEADLYATIACRQAIKRNDTISSEFSQFLINEFFNLKLKHCPHGRKIYHKI HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHH SKFELEKNVNRK HHHHHHHCCCCC >Mature Secondary Structure MNKIKFLDKSLVQKIAAGEAIDRPCSILRELLDNAIDSGADKIEVFIEEGGIRRILITDN CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEECC GSGISREDLKICYLPHTTSKINEEQDLEKIQTLGFRGEALSSIAICSNLTITSSTTGEDS CCCCCCCCCEEEEECCCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCC YQIEVENGTEKYFKKQSAINGTIVDVTNLFHNFPARKRFLKKDSIETKMCLKVFEEKAVT EEEEECCCHHHHHHHHHCCCCEEEEHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCC HPGIDFKLNINNELRKVYFKESLIDRVQSVYGEIIDNNKFGKIEAEYENIQMKIFFAPPN CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCC FSRKDKRNIKIFVNRRPVEEKNLSEAIIDGHSRILTNRNFPVCYLFLEIDPRYIDFNIHP CCCCCCCCEEEEEECCCCCCCCHHHHHHCCCHHEEECCCCCEEEEEEEECCEEEEEEECC QKKEVRFFNLPFLPKQIASNINEFFDRGQKEILQDYHNIIIKRQLTNDDHLLHTEDDPTN CCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCEEECCCCCCC SDFQAYKITQNEALTLDKPQNNKITNIIEDKVKFESQPPTQKDKPSFKNYIQNIFLKTST CCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH MLNDLQKPIEKHEFKYIGQLFSEFLIVESDNEVYFIDQHALHEKIIYQILIKSEKIIQKL HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH LVPIEFQVDCEDKDKILASELEEYKKIDITVNKIKEQTYQLESIPNICNKYESVIIQFLK HCCCEEEECCCCHHHHHHHHHHHHHEECEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRKSKTIDSLEADLYATIACRQAIKRNDTISSEFSQFLINEFFNLKLKHCPHGRKIYHKI HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHH SKFELEKNVNRK HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA