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The map label for this gene is olpB [H]

Identifier: 187918082

GI number: 187918082

Start: 210327

End: 212144

Strand: Direct

Name: olpB [H]

Synonym: BH0209

Alternate gene names: 187918082

Gene position: 210327-212144 (Clockwise)

Preceding gene: 187918081

Following gene: 187918083

Centisome position: 22.8

GC content: 33.94

Gene sequence:

>1818_bases
TTGCTTGAAAGTAATAAAATAGTACTTATAAAAGATATGAAGAAATGTTTATTATCGCTTAAAAATTTGATCATCTTGCT
TATTTTACTACTTAATGCAAATTTGGCATACTCTCAAAGATTAATTAAAATTGGACAAGAAGAGATAAAAAATAAAAATT
ATCTACAAGCAATAAAAATCCTCAGTGAAGCTATTCAAAAATACCCAAAAGTACAAAACGGATATTATTTTTTAGCAATA
GCTTATAGAGAAAATAATCAACTAACAGAAGCAGAGGGGGCTCTGCTTGATGGAATTGCAATAGGAGGGGATATTGATTA
CAAGTTATATTTTGAACTGGGAAACATAATGTTTAAACGAGGTGAAGGTTATTATAATCTAGCAATCAAATATTATTCCA
ATTCAGTTAAAAATATGCCCAATTATGACAAAGCACTTCTTAACAGAGCAAATTCTTATGTTGAACAAGGAAAAATTAAT
TTTAAGGAAAAAGATTATAAAAATGCATGGGATTCATACAGTATGGCAATCCATGATTATTCGCAATTTATTACACTAAG
ATATGAAAGTGAAAAAAAAAATTCTATTCTCCACATGATTGATCTTTTAAGAAATAAAAAAGCCGCTCTTGAAAAACTTG
ACAAAAGTCTCAAAAACAGAAGTGAACACATTGCCATAGGACAGCAACAAGATCATGGAAACAAAGAACCGCAAATAAAT
AAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGTAAAGACAA
GCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACCGCAAATAA
ATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGTAAAGAC
AAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACCGCAAAT
AAATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGTAAAG
ACAAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACCGCAA
ATAAATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGTAA
AGACAAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACCGC
AAATAAATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGT
AAAGACAAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACC
GCAAATAAATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGG
GTAAAGACAAGCCTGCAGATAAAGAACCGCAAATAAATAAAAAAGAGCCTACGGGTAAAGACAAGCCTGCAGATAAAGAA
CCGCAAATAAATAAAAAAGAGCCTACGGGTAAAAACAAGCCTGCAGATAAAGACAAATTTAAAGATAATTTAAAAACAGA
TTCTTTAATTGAATTAGACAAAATTAATTGGCAAGAGGAGTTAAATATAGATGAATAA

Upstream 100 bases:

>100_bases
ATCTCACCCAAACAAAAAGAAGAAATAATAAAATTCATTACACTTTTCACTAAAGAACAAAATAAATTTGATTTTAAAAC
ACTATGAAATATAGAAATAT

Downstream 100 bases:

>100_bases
AAGAAAAAATTTACCCATACTAATAATTTTGATCATATTACTTATTGCTTCATTTGGGGGCCTTGGTTATTACGTATATA
AAGAACGACTCAATAAAAAC

Product: mucin 2 precursor

Products: NA

Alternate protein names: Outer layer protein B; S-layer protein 1 [H]

Number of amino acids: Translated: 605; Mature: 605

Protein sequence:

>605_residues
MLESNKIVLIKDMKKCLLSLKNLIILLILLLNANLAYSQRLIKIGQEEIKNKNYLQAIKILSEAIQKYPKVQNGYYFLAI
AYRENNQLTEAEGALLDGIAIGGDIDYKLYFELGNIMFKRGEGYYNLAIKYYSNSVKNMPNYDKALLNRANSYVEQGKIN
FKEKDYKNAWDSYSMAIHDYSQFITLRYESEKKNSILHMIDLLRNKKAALEKLDKSLKNRSEHIAIGQQQDHGNKEPQIN
KKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKD
KPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQ
INKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTG
KDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKE
PQINKKEPTGKNKPADKDKFKDNLKTDSLIELDKINWQEELNIDE

Sequences:

>Translated_605_residues
MLESNKIVLIKDMKKCLLSLKNLIILLILLLNANLAYSQRLIKIGQEEIKNKNYLQAIKILSEAIQKYPKVQNGYYFLAI
AYRENNQLTEAEGALLDGIAIGGDIDYKLYFELGNIMFKRGEGYYNLAIKYYSNSVKNMPNYDKALLNRANSYVEQGKIN
FKEKDYKNAWDSYSMAIHDYSQFITLRYESEKKNSILHMIDLLRNKKAALEKLDKSLKNRSEHIAIGQQQDHGNKEPQIN
KKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKD
KPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQ
INKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTG
KDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKE
PQINKKEPTGKNKPADKDKFKDNLKTDSLIELDKINWQEELNIDE
>Mature_605_residues
MLESNKIVLIKDMKKCLLSLKNLIILLILLLNANLAYSQRLIKIGQEEIKNKNYLQAIKILSEAIQKYPKVQNGYYFLAI
AYRENNQLTEAEGALLDGIAIGGDIDYKLYFELGNIMFKRGEGYYNLAIKYYSNSVKNMPNYDKALLNRANSYVEQGKIN
FKEKDYKNAWDSYSMAIHDYSQFITLRYESEKKNSILHMIDLLRNKKAALEKLDKSLKNRSEHIAIGQQQDHGNKEPQIN
KKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKD
KPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQ
INKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTG
KDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKE
PQINKKEPTGKNKPADKDKFKDNLKTDSLIELDKINWQEELNIDE

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

Organism=Caenorhabditis elegans, GI193203538, Length=340, Percent_Identity=33.5294117647059, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008965
- InterPro:   IPR002102
- InterPro:   IPR018452
- InterPro:   IPR001119 [H]

Pfam domain/function: PF00963 Cohesin; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 68738; Mature: 68738

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESNKIVLIKDMKKCLLSLKNLIILLILLLNANLAYSQRLIKIGQEEIKNKNYLQAIKI
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LSEAIQKYPKVQNGYYFLAIAYRENNQLTEAEGALLDGIAIGGDIDYKLYFELGNIMFKR
HHHHHHHCCCCCCCEEEEEEEECCCCCCCHHCCCEECCEEECCCCCEEEEEEECCCCEEC
GEGYYNLAIKYYSNSVKNMPNYDKALLNRANSYVEQGKINFKEKDYKNAWDSYSMAIHDY
CCCEEEEEEEEECCHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
SQFITLRYESEKKNSILHMIDLLRNKKAALEKLDKSLKNRSEHIAIGQQQDHGNKEPQIN
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC
KKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQIN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KEPQINKKEPTGKDKPADKEPQINKKEPTGKNKPADKDKFKDNLKTDSLIELDKINWQEE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEHHHCCCHHH
LNIDE
CCCCC
>Mature Secondary Structure
MLESNKIVLIKDMKKCLLSLKNLIILLILLLNANLAYSQRLIKIGQEEIKNKNYLQAIKI
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LSEAIQKYPKVQNGYYFLAIAYRENNQLTEAEGALLDGIAIGGDIDYKLYFELGNIMFKR
HHHHHHHCCCCCCCEEEEEEEECCCCCCCHHCCCEECCEEECCCCCEEEEEEECCCCEEC
GEGYYNLAIKYYSNSVKNMPNYDKALLNRANSYVEQGKINFKEKDYKNAWDSYSMAIHDY
CCCEEEEEEEEECCHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
SQFITLRYESEKKNSILHMIDLLRNKKAALEKLDKSLKNRSEHIAIGQQQDHGNKEPQIN
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC
KKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQIN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPADKEPQINKKEPTGKDKPAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KEPQINKKEPTGKDKPADKEPQINKKEPTGKNKPADKDKFKDNLKTDSLIELDKINWQEE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEHHHCCCHHH
LNIDE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8458832 [H]