Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736374
Identifier: 187736374
GI number: 187736374
Start: 2297599
End: 2298486
Strand: Reverse
Name: 187736374
Synonym: Amuc_1891
Alternate gene names: NA
Gene position: 2298486-2297599 (Counterclockwise)
Preceding gene: 187736377
Following gene: 187736371
Centisome position: 86.28
GC content: 58.78
Gene sequence:
>888_bases ATGTACTTTTTCCTTGCCGCTTTTCAGGCAAAGGGAAAATATAATCCGCCCTGTTTCGTCATCATGAAAGCATACGTTAT CTTAAAAAACTCACTGCTGGCGGCCGCTATCGGCTGCGCTTTGTCCGGCTGCTACGATCCTTATTATGACAATTTCAGCG TGTCAGGCTCCTACAGCAGCGGAGGTTCCGGCGTGTCGTACATGTATGACAGCTCCGGCTACCCCATTTACGGATATTAT GGAGGAAGACCCATTTATGCCTACGACACGTTCGGAAGCCCCATTTACTCCATCAACCTGATCCGTCCGAATTACTATAT TCCCACGTGGGGGCCGGCTCCCTATTACCGCGGGCATTATGTCCGTCCCCATAACTGCCGCCCCATGGCAAAACCGCCGA TGAAACCCCACTTCAGGCCTGACCATTTCCGTCCGGGAAACAACAGGCCGGCCCCTCAGCCCGGACGGCCCAATCAACGG CCGGACTTTGGAAAACCCGGCAATTTACAGCGGCCGCCAGCACATCATCCGGGAATCAACCAGCCCGGACGGCCTTCTCG CCCTTCCGCCAATAATCCTTCCCGTCCCGGCGGCACGAATCGCCCCGTCATCAACCGTCCGGAAGGCAACCGTCCCTCCA GACCGGATTTCGGACGTCCCAGCCGCCCTTCCACCCTGCCGTCTTCAAGGCCTTCCGCCCCCAATCCAGGCCACTCCGGC ATCAACCGCCCCGGCAGGCCCTCTCCCGTTTCCCGGCCTTCTTCCCCGCCCCATTCCGCCAGCGCACCCAGCAGGCCGTC CTCCCCTCATTCATCTGCGCCATCCCGTCCATCCCCTTCACCGAAACCCTCCAATCCCGGGAATTCCCACGGAACGCACA GGAGATAA
Upstream 100 bases:
>100_bases GCCGACTTTTTTATTTTGAAGAAGAATTCCCATCGCGTAGAACGTTTTTGCAGTCTAAGACAACAGGAAGTGCGTTTCCA AGCAAAATAATTTTAAACAA
Downstream 100 bases:
>100_bases GTTTTCCTGAACCGCTATTCATCGCAGGGCTGTTCTGTTCCGGGGATGCAAAACGGCCCTGTATCATGGCTTCGTCCAGG CAGCGGCCATCCTTCTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MYFFLAAFQAKGKYNPPCFVIMKAYVILKNSLLAAAIGCALSGCYDPYYDNFSVSGSYSSGGSGVSYMYDSSGYPIYGYY GGRPIYAYDTFGSPIYSINLIRPNYYIPTWGPAPYYRGHYVRPHNCRPMAKPPMKPHFRPDHFRPGNNRPAPQPGRPNQR PDFGKPGNLQRPPAHHPGINQPGRPSRPSANNPSRPGGTNRPVINRPEGNRPSRPDFGRPSRPSTLPSSRPSAPNPGHSG INRPGRPSPVSRPSSPPHSASAPSRPSSPHSSAPSRPSPSPKPSNPGNSHGTHRR
Sequences:
>Translated_295_residues MYFFLAAFQAKGKYNPPCFVIMKAYVILKNSLLAAAIGCALSGCYDPYYDNFSVSGSYSSGGSGVSYMYDSSGYPIYGYY GGRPIYAYDTFGSPIYSINLIRPNYYIPTWGPAPYYRGHYVRPHNCRPMAKPPMKPHFRPDHFRPGNNRPAPQPGRPNQR PDFGKPGNLQRPPAHHPGINQPGRPSRPSANNPSRPGGTNRPVINRPEGNRPSRPDFGRPSRPSTLPSSRPSAPNPGHSG INRPGRPSPVSRPSSPPHSASAPSRPSSPHSSAPSRPSPSPKPSNPGNSHGTHRR >Mature_295_residues MYFFLAAFQAKGKYNPPCFVIMKAYVILKNSLLAAAIGCALSGCYDPYYDNFSVSGSYSSGGSGVSYMYDSSGYPIYGYY GGRPIYAYDTFGSPIYSINLIRPNYYIPTWGPAPYYRGHYVRPHNCRPMAKPPMKPHFRPDHFRPGNNRPAPQPGRPNQR PDFGKPGNLQRPPAHHPGINQPGRPSRPSANNPSRPGGTNRPVINRPEGNRPSRPDFGRPSRPSTLPSSRPSAPNPGHSG INRPGRPSPVSRPSSPPHSASAPSRPSSPHSSAPSRPSPSPKPSNPGNSHGTHRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32167; Mature: 32167
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFFLAAFQAKGKYNPPCFVIMKAYVILKNSLLAAAIGCALSGCYDPYYDNFSVSGSYSS CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC GGSGVSYMYDSSGYPIYGYYGGRPIYAYDTFGSPIYSINLIRPNYYIPTWGPAPYYRGHY CCCCEEEEECCCCCEEEEEECCEEEEEEECCCCCEEEEEEECCCEECCCCCCCCCCCCCC VRPHNCRPMAKPPMKPHFRPDHFRPGNNRPAPQPGRPNQRPDFGKPGNLQRPPAHHPGIN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPGRPSRPSANNPSRPGGTNRPVINRPEGNRPSRPDFGRPSRPSTLPSSRPSAPNPGHSG CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC INRPGRPSPVSRPSSPPHSASAPSRPSSPHSSAPSRPSPSPKPSNPGNSHGTHRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYFFLAAFQAKGKYNPPCFVIMKAYVILKNSLLAAAIGCALSGCYDPYYDNFSVSGSYSS CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC GGSGVSYMYDSSGYPIYGYYGGRPIYAYDTFGSPIYSINLIRPNYYIPTWGPAPYYRGHY CCCCEEEEECCCCCEEEEEECCEEEEEEECCCCCEEEEEEECCCEECCCCCCCCCCCCCC VRPHNCRPMAKPPMKPHFRPDHFRPGNNRPAPQPGRPNQRPDFGKPGNLQRPPAHHPGIN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPGRPSRPSANNPSRPGGTNRPVINRPEGNRPSRPDFGRPSRPSTLPSSRPSAPNPGHSG CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC INRPGRPSPVSRPSSPPHSASAPSRPSSPHSSAPSRPSPSPKPSNPGNSHGTHRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA