Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is aroA
Identifier: 187736377
GI number: 187736377
Start: 2299826
End: 2301133
Strand: Reverse
Name: aroA
Synonym: Amuc_1894
Alternate gene names: 187736377
Gene position: 2301133-2299826 (Counterclockwise)
Preceding gene: 187736382
Following gene: 187736374
Centisome position: 86.38
GC content: 61.47
Gene sequence:
>1308_bases ATGAACCTTCATTCCCATTCCATTTCCTCCCTGCAAGGGGCACTGACCGTGCCCGGAGACAAAAGCATTTCCCACCGCGC CGCCATTCTGGGAGGCCTGGCGGAAGGAGTGACGGAAGTGGATAATTTTCTATGCAGTGAAGATTGCCTGAATACCCTGC GCGCCATGGAGCAGCTAGGCGCCAAAGTGGATGTGCTGGAAGAACGGCAGGGATACGGCCCCGTCCGCTTCCGAATTACG GGCGTCGCCATGAGCCCCAAGGCTCCTGAACGGCCCATTGACTGCGGCAATTCCGGCACGGGCATGAGGCTGCTGGCCGG GATGCTGGCCGCCTGCCCCTTTGATTCGGAAATGTTTGGGGACGCTTCCCTGAGCTCCCGCCCCATGGGCCGCATCATGC AGCCTCTGGAACAGATGGGAGCGCGGATTGAAGCCCGGGGAGCCAAACCGGGCTGTGCTCCGCTGAGCATTCACGGCGGG CGGGTGCACCCCATTTCCTACACGCTTCCCATGGCCAGCGCCCAGGTTAAAAGCGCCATTCTATTGGCGGGCATGTTTGC GGACGGAACCACCACCGTGCGCCAGCCGGCCGTCACCCGCGACCATACAGAACGCCTGTTCCGCCATTTCGGCGTTCCCT GCACCGTGGATGGACTTACCGTCGGAACCTGCGGGCCAGCTCTCCCCGTCGCCCATGATTTGACAGTCCCGGCAGATATT TCCTCCGCAGCCTTCTGGATGGTGGCCGCCGCCAGCCGTCCGGGTTCCCGCCTGACGTTGCGCCAGGTAGGGCTGAACAA GACGCGGAACGCCGTCATCAGCGCTCTGCAGCGGATGGGCGCGCGAATGGACATCGTGCCCACTTCTCCGGAAGATGCCG GCGAACCATACGGCGATATTACCGTGTACGGTTCGGATTCCCTGCACGGCACCAGCCTCCTCCCGGAAGAAATACCCAAC CTCATTGACGAGATACCTATCCTGGCCGTAGCGGGAGCCCTGGGCCGGGGAGACTTCATCGTCCGAAACGCCCGCGAATT ACGCGTCAAGGAAACGGACCGCATCGCCACCACGGCGGCCAACCTCCGGCTCATGGGCGTGGATGTGGAAGAATTTGACG ATGGCATGGTTGTTCACGGCGGCACTCCCCTGAAGGGAACGGAATTATCCAGTTATGGGGACCACCGCATCGCCATGAGC TTCCTGGTGGCCGGACTCAGCGCACAGGGAGAAACCGTAGTGACGGATGCGGAATGCATCAATACGTCCTATCCCGGTTT TGAACGGGATCTGGCTCAGTTCCTGTAA
Upstream 100 bases:
>100_bases CGGAAAATCAACTCCATTCTGGAATGCTCCCTGATGCCTCCGCCCATCTCGTAATTGGCTTGATTCTGCATCCGATACAG GGTAGTTCTTCCGGAAACTC
Downstream 100 bases:
>100_bases AAAACGCAAGATTCCAGCCGGATTTCACCCCGTCCATGGAATAATGCCGGAAGCAGAAAAGAATCTTGCGGCATTCCGGC CATATTATGCTTCCCGTTCC
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNLHSHSISSLQGALTVPGDKSISHRAAILGGLAEGVTEVDNFLCSEDCLNTLRAMEQLGAKVDVLEERQGYGPVRFRIT GVAMSPKAPERPIDCGNSGTGMRLLAGMLAACPFDSEMFGDASLSSRPMGRIMQPLEQMGARIEARGAKPGCAPLSIHGG RVHPISYTLPMASAQVKSAILLAGMFADGTTTVRQPAVTRDHTERLFRHFGVPCTVDGLTVGTCGPALPVAHDLTVPADI SSAAFWMVAAASRPGSRLTLRQVGLNKTRNAVISALQRMGARMDIVPTSPEDAGEPYGDITVYGSDSLHGTSLLPEEIPN LIDEIPILAVAGALGRGDFIVRNARELRVKETDRIATTAANLRLMGVDVEEFDDGMVVHGGTPLKGTELSSYGDHRIAMS FLVAGLSAQGETVVTDAECINTSYPGFERDLAQFL
Sequences:
>Translated_435_residues MNLHSHSISSLQGALTVPGDKSISHRAAILGGLAEGVTEVDNFLCSEDCLNTLRAMEQLGAKVDVLEERQGYGPVRFRIT GVAMSPKAPERPIDCGNSGTGMRLLAGMLAACPFDSEMFGDASLSSRPMGRIMQPLEQMGARIEARGAKPGCAPLSIHGG RVHPISYTLPMASAQVKSAILLAGMFADGTTTVRQPAVTRDHTERLFRHFGVPCTVDGLTVGTCGPALPVAHDLTVPADI SSAAFWMVAAASRPGSRLTLRQVGLNKTRNAVISALQRMGARMDIVPTSPEDAGEPYGDITVYGSDSLHGTSLLPEEIPN LIDEIPILAVAGALGRGDFIVRNARELRVKETDRIATTAANLRLMGVDVEEFDDGMVVHGGTPLKGTELSSYGDHRIAMS FLVAGLSAQGETVVTDAECINTSYPGFERDLAQFL >Mature_435_residues MNLHSHSISSLQGALTVPGDKSISHRAAILGGLAEGVTEVDNFLCSEDCLNTLRAMEQLGAKVDVLEERQGYGPVRFRIT GVAMSPKAPERPIDCGNSGTGMRLLAGMLAACPFDSEMFGDASLSSRPMGRIMQPLEQMGARIEARGAKPGCAPLSIHGG RVHPISYTLPMASAQVKSAILLAGMFADGTTTVRQPAVTRDHTERLFRHFGVPCTVDGLTVGTCGPALPVAHDLTVPADI SSAAFWMVAAASRPGSRLTLRQVGLNKTRNAVISALQRMGARMDIVPTSPEDAGEPYGDITVYGSDSLHGTSLLPEEIPN LIDEIPILAVAGALGRGDFIVRNARELRVKETDRIATTAANLRLMGVDVEEFDDGMVVHGGTPLKGTELSSYGDHRIAMS FLVAGLSAQGETVVTDAECINTSYPGFERDLAQFL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=444, Percent_Identity=28.1531531531532, Blast_Score=121, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6320332, Length=473, Percent_Identity=25.7928118393235, Blast_Score=103, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_AKKM8 (B2UN97)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001878489.1 - GeneID: 6273816 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_1894 - HOGENOM: HBG646626 - OMA: SKPETQR - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 46106; Mature: 46106
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLHSHSISSLQGALTVPGDKSISHRAAILGGLAEGVTEVDNFLCSEDCLNTLRAMEQLG CCCCCCCHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC AKVDVLEERQGYGPVRFRITGVAMSPKAPERPIDCGNSGTGMRLLAGMLAACPFDSEMFG CCEEEHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCC DASLSSRPMGRIMQPLEQMGARIEARGAKPGCAPLSIHGGRVHPISYTLPMASAQVKSAI CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCEECEEEEECCCCHHHHHHHH LLAGMFADGTTTVRQPAVTRDHTERLFRHFGVPCTVDGLTVGTCGPALPVAHDLTVPADI HHEEECCCCCCHHCCCCCCHHHHHHHHHHCCCCEEECCEEECCCCCCCCCCCCCCCCCCC SSAAFWMVAAASRPGSRLTLRQVGLNKTRNAVISALQRMGARMDIVPTSPEDAGEPYGDI CHHHEEEEEECCCCCCEEEHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCE TVYGSDSLHGTSLLPEEIPNLIDEIPILAVAGALGRGDFIVRNARELRVKETDRIATTAA EEEECCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCEEEECHHHHCCCHHHHHHEEEC NLRLMGVDVEEFDDGMVVHGGTPLKGTELSSYGDHRIAMSFLVAGLSAQGETVVTDAECI CEEEEECCHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECHHHH NTSYPGFERDLAQFL CCCCCCHHHHHHHHC >Mature Secondary Structure MNLHSHSISSLQGALTVPGDKSISHRAAILGGLAEGVTEVDNFLCSEDCLNTLRAMEQLG CCCCCCCHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC AKVDVLEERQGYGPVRFRITGVAMSPKAPERPIDCGNSGTGMRLLAGMLAACPFDSEMFG CCEEEHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCC DASLSSRPMGRIMQPLEQMGARIEARGAKPGCAPLSIHGGRVHPISYTLPMASAQVKSAI CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCEECEEEEECCCCHHHHHHHH LLAGMFADGTTTVRQPAVTRDHTERLFRHFGVPCTVDGLTVGTCGPALPVAHDLTVPADI HHEEECCCCCCHHCCCCCCHHHHHHHHHHCCCCEEECCEEECCCCCCCCCCCCCCCCCCC SSAAFWMVAAASRPGSRLTLRQVGLNKTRNAVISALQRMGARMDIVPTSPEDAGEPYGDI CHHHEEEEEECCCCCCEEEHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCE TVYGSDSLHGTSLLPEEIPNLIDEIPILAVAGALGRGDFIVRNARELRVKETDRIATTAA EEEECCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCEEEECHHHHCCCHHHHHHEEEC NLRLMGVDVEEFDDGMVVHGGTPLKGTELSSYGDHRIAMSFLVAGLSAQGETVVTDAECI CEEEEECCHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECHHHH NTSYPGFERDLAQFL CCCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA