Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736355

Identifier: 187736355

GI number: 187736355

Start: 2276934

End: 2278280

Strand: Direct

Name: 187736355

Synonym: Amuc_1872

Alternate gene names: NA

Gene position: 2276934-2278280 (Clockwise)

Preceding gene: 187736353

Following gene: 187736356

Centisome position: 85.47

GC content: 60.28

Gene sequence:

>1347_bases
ATGCAGATAATGAACAGACCAGCACCATCAGTCCCCACCGCCGATATTCCGGTAGAGGCCATGCTGGCAGAGGTGCGGAA
GCCGCTGGGACCCGTTTGGTGGAGCGTGTTTCTCGCCAGCGCATTGCTGGCGGCGTGGGGCATAGGGTGGAGTTCCTGGC
GCATTGCCGCAGAGGGTGTGGGCGTGCTGGGGGTGAATAATAACGTGGTGTGGGGGCTGGACATCGTGCATTTTGTTTTC
TGGATAGGCCTGGGGCATGCGGGCACCCTGATTTCCGCCGTCCTGCTGCTGACGCGCCAGTCATGGAGAAGCCCGATTGC
GCGCGGAGCGGAACAGATGACCCTGTGCGCGGTTATCTGCGCCGCCGTTTTCCCTGTGGTGCACGTAGGGCGTGTCTGGA
TGGCGTGGATGGCTTCCCCGTTGCCGGAAGTGAGCGGAATTTGGCCGGACATGGCCTCTCCTTTGATGTGGGATGTCATG
GCAGTCAGCACCTATTTTCTTCTTTCCCTGTTGTACTGGTATATCGGCCTGGTGCCGGATTTCGCGTTGCTGAGGGATTG
CTGCAAGGGGCGTCTGAGGCGCCGGTACGGGTGGCTGGCGCTGGGCTGGCAGGGAACGGGGCGCCAGTGGCGCGCCTATG
AAAAGGCCAGCCTTCTTTTTGCGGTTATTCTGACTCCTCTCGTGGTATCCGTTCATTCCGTGGTGAGTTTCGATTTTTCC
GTGACTCAGGTGCCGGGGTGGCACCAGAGCATTTTCCCGCCCTATTTCGTAGGGGGGGCCATCCTCAGCGGCATGGCGAT
GGTTCAGCTGATTCTGCTGGGGGTGAGACGTCTGATGGCCGGCAGCGGCGTTCGCCGGGCCGTTACTCCGGCCATTCTGG
ATTTAAGTTCCCGGTTTGTGCTGGCCCTGAGCCTGGTGATGGGAGCCATGTATTTGTGGGAGCATCTGGCAGCCATTCTG
AATGGAGGCTCTCCGGAGCCGTTTCCGGGCAGAAATCCTGTGAATGCCGTGTTCCTCATCGTCATGGTTGCCGGGAATGT
GGCGCTGCCCCAGTTGTTCTGGTTCCGTTCTCTGCGAACCAACCGCTGGGTGATCGCCGCCGTGGCTCTGGGAGTGCTTG
CGGGCATGTGGATGGAACGTTTCTGGATTGTCGTGAATTCCCTGAAGGCATCCCTGCTGGCTGCCAACATCGGAGAGTAT
TTCCCCAGCGTGACGGATTTGGCCATGATGGCCGGGAGCGTGGGGCTGTTTATGGCCCTGTACATGGCGCTGGTGCGTGT
GGCTCCGTTCTTCTCCCTGTGCGACGTGCGGGAACAGCAATCCCTGAACAAGGAGGGCGGGGCATGA

Upstream 100 bases:

>100_bases
CGCCCCTGTTTCCTGGAGCCGTGCGCCATGTCACGTGCGTTCCCCTTTTGAAATTGACGGGGAAAAGCACTCAAGTAAGC
TTTAAAGAGCTTCCGACCCT

Downstream 100 bases:

>100_bases
AAAAGCCCGTCATTTCCGGCTGGGTGCTTTCCTTCGGTTCGGAGAAGGCGCTCCTTCAGGCCGTCCGCGTGCTGGTGAAG
GAGGAAAATCTGCGCTGGGA

Product: Polysulphide reductase NrfD

Products: NA

Alternate protein names: Molybdopterin Oxidoredutase Membrane Subunit; Molybdopterin Oxidoreductase; Molybdopterin Oxidoreductase Membrane Subunit; NrfD Family Oxidoreductase Membrane Subunit; Polysulphide Reductase; Polysulphide Reductase NrfD Superfamily; Polysulphide Reductase Nrfd; Oxidoredutase Membrane Subunit Nrfd Family; Anaerobic Dehydrogenase Membrane Anchor Subunit

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MQIMNRPAPSVPTADIPVEAMLAEVRKPLGPVWWSVFLASALLAAWGIGWSSWRIAAEGVGVLGVNNNVVWGLDIVHFVF
WIGLGHAGTLISAVLLLTRQSWRSPIARGAEQMTLCAVICAAVFPVVHVGRVWMAWMASPLPEVSGIWPDMASPLMWDVM
AVSTYFLLSLLYWYIGLVPDFALLRDCCKGRLRRRYGWLALGWQGTGRQWRAYEKASLLFAVILTPLVVSVHSVVSFDFS
VTQVPGWHQSIFPPYFVGGAILSGMAMVQLILLGVRRLMAGSGVRRAVTPAILDLSSRFVLALSLVMGAMYLWEHLAAIL
NGGSPEPFPGRNPVNAVFLIVMVAGNVALPQLFWFRSLRTNRWVIAAVALGVLAGMWMERFWIVVNSLKASLLAANIGEY
FPSVTDLAMMAGSVGLFMALYMALVRVAPFFSLCDVREQQSLNKEGGA

Sequences:

>Translated_448_residues
MQIMNRPAPSVPTADIPVEAMLAEVRKPLGPVWWSVFLASALLAAWGIGWSSWRIAAEGVGVLGVNNNVVWGLDIVHFVF
WIGLGHAGTLISAVLLLTRQSWRSPIARGAEQMTLCAVICAAVFPVVHVGRVWMAWMASPLPEVSGIWPDMASPLMWDVM
AVSTYFLLSLLYWYIGLVPDFALLRDCCKGRLRRRYGWLALGWQGTGRQWRAYEKASLLFAVILTPLVVSVHSVVSFDFS
VTQVPGWHQSIFPPYFVGGAILSGMAMVQLILLGVRRLMAGSGVRRAVTPAILDLSSRFVLALSLVMGAMYLWEHLAAIL
NGGSPEPFPGRNPVNAVFLIVMVAGNVALPQLFWFRSLRTNRWVIAAVALGVLAGMWMERFWIVVNSLKASLLAANIGEY
FPSVTDLAMMAGSVGLFMALYMALVRVAPFFSLCDVREQQSLNKEGGA
>Mature_448_residues
MQIMNRPAPSVPTADIPVEAMLAEVRKPLGPVWWSVFLASALLAAWGIGWSSWRIAAEGVGVLGVNNNVVWGLDIVHFVF
WIGLGHAGTLISAVLLLTRQSWRSPIARGAEQMTLCAVICAAVFPVVHVGRVWMAWMASPLPEVSGIWPDMASPLMWDVM
AVSTYFLLSLLYWYIGLVPDFALLRDCCKGRLRRRYGWLALGWQGTGRQWRAYEKASLLFAVILTPLVVSVHSVVSFDFS
VTQVPGWHQSIFPPYFVGGAILSGMAMVQLILLGVRRLMAGSGVRRAVTPAILDLSSRFVLALSLVMGAMYLWEHLAAIL
NGGSPEPFPGRNPVNAVFLIVMVAGNVALPQLFWFRSLRTNRWVIAAVALGVLAGMWMERFWIVVNSLKASLLAANIGEY
FPSVTDLAMMAGSVGLFMALYMALVRVAPFFSLCDVREQQSLNKEGGA

Specific function: Unknown

COG id: COG5557

COG function: function code C; Polysulphide reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49149; Mature: 49149

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIMNRPAPSVPTADIPVEAMLAEVRKPLGPVWWSVFLASALLAAWGIGWSSWRIAAEGV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEHCCCC
GVLGVNNNVVWGLDIVHFVFWIGLGHAGTLISAVLLLTRQSWRSPIARGAEQMTLCAVIC
EEEECCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHH
AAVFPVVHVGRVWMAWMASPLPEVSGIWPDMASPLMWDVMAVSTYFLLSLLYWYIGLVPD
HHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FALLRDCCKGRLRRRYGWLALGWQGTGRQWRAYEKASLLFAVILTPLVVSVHSVVSFDFS
HHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VTQVPGWHQSIFPPYFVGGAILSGMAMVQLILLGVRRLMAGSGVRRAVTPAILDLSSRFV
ECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LALSLVMGAMYLWEHLAAILNGGSPEPFPGRNPVNAVFLIVMVAGNVALPQLFWFRSLRT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
NRWVIAAVALGVLAGMWMERFWIVVNSLKASLLAANIGEYFPSVTDLAMMAGSVGLFMAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YMALVRVAPFFSLCDVREQQSLNKEGGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQIMNRPAPSVPTADIPVEAMLAEVRKPLGPVWWSVFLASALLAAWGIGWSSWRIAAEGV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEHCCCC
GVLGVNNNVVWGLDIVHFVFWIGLGHAGTLISAVLLLTRQSWRSPIARGAEQMTLCAVIC
EEEECCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHH
AAVFPVVHVGRVWMAWMASPLPEVSGIWPDMASPLMWDVMAVSTYFLLSLLYWYIGLVPD
HHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FALLRDCCKGRLRRRYGWLALGWQGTGRQWRAYEKASLLFAVILTPLVVSVHSVVSFDFS
HHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VTQVPGWHQSIFPPYFVGGAILSGMAMVQLILLGVRRLMAGSGVRRAVTPAILDLSSRFV
ECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LALSLVMGAMYLWEHLAAILNGGSPEPFPGRNPVNAVFLIVMVAGNVALPQLFWFRSLRT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
NRWVIAAVALGVLAGMWMERFWIVVNSLKASLLAANIGEYFPSVTDLAMMAGSVGLFMAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YMALVRVAPFFSLCDVREQQSLNKEGGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA