Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736356
Identifier: 187736356
GI number: 187736356
Start: 2278277
End: 2278837
Strand: Direct
Name: 187736356
Synonym: Amuc_1873
Alternate gene names: NA
Gene position: 2278277-2278837 (Clockwise)
Preceding gene: 187736355
Following gene: 187736357
Centisome position: 85.52
GC content: 62.03
Gene sequence:
>561_bases ATGAAAAAGCCCGTCATTTCCGGCTGGGTGCTTTCCTTCGGTTCGGAGAAGGCGCTCCTTCAGGCCGTCCGCGTGCTGGT GAAGGAGGAAAATCTGCGCTGGGAGGTTTGCGCACCTTACCCCTGCGCCGCTGTTCGTTTTGCCAACAGGCACGCCGGGA AGGCCGTGGGAGCAGGCGTTCGGCTGTGGGCCGCAGCGGGCGGCGTCTGCGGGTTTCTGGCCGTGGCTCTGTGGCTTTAC TGGACGCAGTTCTGTGCGGATCCCCTTGTGACCCAGGGAAGGGTCCAGGGCTGGGACAGCTGGCCCGCATATGTCCCTCC CCTGTTTGAAGGAACTTTGCTGGGGGCCGGATTGCTGACCGCCGCCGGTTTTCTGAAGGGGGCTCTTCTCCCGCAATGGC ACGACTGGGCGTTCGAGTGTGATTTTTTCAGGACGGATGAGCACGGGAACGGTTACTTCATTCTGCTGGAAGGCGGGAGC GAAGGCTATGCCGCCGTTTTGGCTGAAGCCCTGCATCCGGATGCCTGCGAGTACGTTCATGGGAAAGGAGGCCGGGCATG A
Upstream 100 bases:
>100_bases GGCTGTTTATGGCCCTGTACATGGCGCTGGTGCGTGTGGCTCCGTTCTTCTCCCTGTGCGACGTGCGGGAACAGCAATCC CTGAACAAGGAGGGCGGGGC
Downstream 100 bases:
>100_bases GAGGAGGCATCACGGCGGTAGCAGCCCTTGTTCTGCTGGGAGCACTCTGGTTCCTGGCAGGGGACGACGATGGAAGAAAT GCCGTTCCCCGTTTGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKKPVISGWVLSFGSEKALLQAVRVLVKEENLRWEVCAPYPCAAVRFANRHAGKAVGAGVRLWAAAGGVCGFLAVALWLY WTQFCADPLVTQGRVQGWDSWPAYVPPLFEGTLLGAGLLTAAGFLKGALLPQWHDWAFECDFFRTDEHGNGYFILLEGGS EGYAAVLAEALHPDACEYVHGKGGRA
Sequences:
>Translated_186_residues MKKPVISGWVLSFGSEKALLQAVRVLVKEENLRWEVCAPYPCAAVRFANRHAGKAVGAGVRLWAAAGGVCGFLAVALWLY WTQFCADPLVTQGRVQGWDSWPAYVPPLFEGTLLGAGLLTAAGFLKGALLPQWHDWAFECDFFRTDEHGNGYFILLEGGS EGYAAVLAEALHPDACEYVHGKGGRA >Mature_186_residues MKKPVISGWVLSFGSEKALLQAVRVLVKEENLRWEVCAPYPCAAVRFANRHAGKAVGAGVRLWAAAGGVCGFLAVALWLY WTQFCADPLVTQGRVQGWDSWPAYVPPLFEGTLLGAGLLTAAGFLKGALLPQWHDWAFECDFFRTDEHGNGYFILLEGGS EGYAAVLAEALHPDACEYVHGKGGRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20169; Mature: 20169
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPVISGWVLSFGSEKALLQAVRVLVKEENLRWEVCAPYPCAAVRFANRHAGKAVGAGV CCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHCCCC RLWAAAGGVCGFLAVALWLYWTQFCADPLVTQGRVQGWDSWPAYVPPLFEGTLLGAGLLT CEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH AAGFLKGALLPQWHDWAFECDFFRTDEHGNGYFILLEGGSEGYAAVLAEALHPDACEYVH HHHHHHCCCCCCCCCCEEEECEEECCCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHC GKGGRA CCCCCC >Mature Secondary Structure MKKPVISGWVLSFGSEKALLQAVRVLVKEENLRWEVCAPYPCAAVRFANRHAGKAVGAGV CCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHCCCC RLWAAAGGVCGFLAVALWLYWTQFCADPLVTQGRVQGWDSWPAYVPPLFEGTLLGAGLLT CEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH AAGFLKGALLPQWHDWAFECDFFRTDEHGNGYFILLEGGSEGYAAVLAEALHPDACEYVH HHHHHHCCCCCCCCCCEEEECEEECCCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHC GKGGRA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA