Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736356

Identifier: 187736356

GI number: 187736356

Start: 2278277

End: 2278837

Strand: Direct

Name: 187736356

Synonym: Amuc_1873

Alternate gene names: NA

Gene position: 2278277-2278837 (Clockwise)

Preceding gene: 187736355

Following gene: 187736357

Centisome position: 85.52

GC content: 62.03

Gene sequence:

>561_bases
ATGAAAAAGCCCGTCATTTCCGGCTGGGTGCTTTCCTTCGGTTCGGAGAAGGCGCTCCTTCAGGCCGTCCGCGTGCTGGT
GAAGGAGGAAAATCTGCGCTGGGAGGTTTGCGCACCTTACCCCTGCGCCGCTGTTCGTTTTGCCAACAGGCACGCCGGGA
AGGCCGTGGGAGCAGGCGTTCGGCTGTGGGCCGCAGCGGGCGGCGTCTGCGGGTTTCTGGCCGTGGCTCTGTGGCTTTAC
TGGACGCAGTTCTGTGCGGATCCCCTTGTGACCCAGGGAAGGGTCCAGGGCTGGGACAGCTGGCCCGCATATGTCCCTCC
CCTGTTTGAAGGAACTTTGCTGGGGGCCGGATTGCTGACCGCCGCCGGTTTTCTGAAGGGGGCTCTTCTCCCGCAATGGC
ACGACTGGGCGTTCGAGTGTGATTTTTTCAGGACGGATGAGCACGGGAACGGTTACTTCATTCTGCTGGAAGGCGGGAGC
GAAGGCTATGCCGCCGTTTTGGCTGAAGCCCTGCATCCGGATGCCTGCGAGTACGTTCATGGGAAAGGAGGCCGGGCATG
A

Upstream 100 bases:

>100_bases
GGCTGTTTATGGCCCTGTACATGGCGCTGGTGCGTGTGGCTCCGTTCTTCTCCCTGTGCGACGTGCGGGAACAGCAATCC
CTGAACAAGGAGGGCGGGGC

Downstream 100 bases:

>100_bases
GAGGAGGCATCACGGCGGTAGCAGCCCTTGTTCTGCTGGGAGCACTCTGGTTCCTGGCAGGGGACGACGATGGAAGAAAT
GCCGTTCCCCGTTTGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKKPVISGWVLSFGSEKALLQAVRVLVKEENLRWEVCAPYPCAAVRFANRHAGKAVGAGVRLWAAAGGVCGFLAVALWLY
WTQFCADPLVTQGRVQGWDSWPAYVPPLFEGTLLGAGLLTAAGFLKGALLPQWHDWAFECDFFRTDEHGNGYFILLEGGS
EGYAAVLAEALHPDACEYVHGKGGRA

Sequences:

>Translated_186_residues
MKKPVISGWVLSFGSEKALLQAVRVLVKEENLRWEVCAPYPCAAVRFANRHAGKAVGAGVRLWAAAGGVCGFLAVALWLY
WTQFCADPLVTQGRVQGWDSWPAYVPPLFEGTLLGAGLLTAAGFLKGALLPQWHDWAFECDFFRTDEHGNGYFILLEGGS
EGYAAVLAEALHPDACEYVHGKGGRA
>Mature_186_residues
MKKPVISGWVLSFGSEKALLQAVRVLVKEENLRWEVCAPYPCAAVRFANRHAGKAVGAGVRLWAAAGGVCGFLAVALWLY
WTQFCADPLVTQGRVQGWDSWPAYVPPLFEGTLLGAGLLTAAGFLKGALLPQWHDWAFECDFFRTDEHGNGYFILLEGGS
EGYAAVLAEALHPDACEYVHGKGGRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20169; Mature: 20169

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPVISGWVLSFGSEKALLQAVRVLVKEENLRWEVCAPYPCAAVRFANRHAGKAVGAGV
CCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHCCCC
RLWAAAGGVCGFLAVALWLYWTQFCADPLVTQGRVQGWDSWPAYVPPLFEGTLLGAGLLT
CEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH
AAGFLKGALLPQWHDWAFECDFFRTDEHGNGYFILLEGGSEGYAAVLAEALHPDACEYVH
HHHHHHCCCCCCCCCCEEEECEEECCCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHC
GKGGRA
CCCCCC
>Mature Secondary Structure
MKKPVISGWVLSFGSEKALLQAVRVLVKEENLRWEVCAPYPCAAVRFANRHAGKAVGAGV
CCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHCCCC
RLWAAAGGVCGFLAVALWLYWTQFCADPLVTQGRVQGWDSWPAYVPPLFEGTLLGAGLLT
CEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH
AAGFLKGALLPQWHDWAFECDFFRTDEHGNGYFILLEGGSEGYAAVLAEALHPDACEYVH
HHHHHHCCCCCCCCCCEEEECEEECCCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHC
GKGGRA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA