Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yicI [C]
Identifier: 187736353
GI number: 187736353
Start: 2273148
End: 2275544
Strand: Direct
Name: yicI [C]
Synonym: Amuc_1870
Alternate gene names: 187736353
Gene position: 2273148-2275544 (Clockwise)
Preceding gene: 187736350
Following gene: 187736355
Centisome position: 85.33
GC content: 56.32
Gene sequence:
>2397_bases ATGTGCTCCGTTTCCAACATCCCTGAAAGACGAAAAACACCTCCTCTCCGGGGGAGTCTCGTCAAATGGGAGTACACGAA TACGGTTTCCAAAATAACTCTCAGCGTGTGTCTTGCTGATGCCGGTATTGTCCGCGTAACGTATTTCCCCGGAGCGGTGC CGGAAGACGAGCCGAGTTATGCCGTAAGCCCCGGATATTCCGCGCCGGGAGCGGAAATCCGCGAGTATGATGAGGACGGG TTTCATGTCGTTGAGACGTCCCTGCTCCGCATCCGCATTCGCACGGAGGAGCAAAAGGTGGATTTTTACGATGTTGCTAC GGATGAGCCCCTGCTGACGGATGAGGGCGGATTCGGCCGGGAGAGCAAGGACTGGACTGGAGACGCCCGGGTATGGATAC GGAAAAATCTTCAGGAAACGGAGCATTTTTTCGGGCTTGGGGACAAGCCGTGTGCCTTGAACCTGAGGGGCAAGTATTTC TCCATGTGGGGAGCGGACCATTATGATTTCCATGAGGAGTCGGATCCCCTTTACAAAAGTATTCCCTTTTTCCTCAGTTT GCGGGAAAGGAAGGCGTACGGCCTGTTGTTTGACAACACGTGCCGTTCGTATTTCGACTTCGGAGCTACGGATGAAAAGG TTCTTTCCTTCGGGTCCTTCGGGGGCCTGATGAATTATTATTTCATTTACGACAACACTCCTCTGGACATCATCTCCGCT TATACGCGCCTTACCGGTACGCCTGAATTGCCGCCTTTGTGGGCGCTGGGGTACCACCAGTCCAAGTGGAGCTATTATCC GGACAAGGCCGTATACAATCTGGTGGAGCGTTTCCGGGGCCTGGGCATTCCGTGCGATGCCGTGCATCTGGACCATCATT ACATGGAACGGAAGGAGGGATTTACCTGGGACAAACAGAATTTTCCCGACGCGGAAGGAATGGTCCGCGCCCTGGAGAAG GACGGTGTGAAGACGGTTCTGATTGTCAATCCCGGCGTGAAGGTCAATTCCGTCAATCCGGTCTGGAAAGAGGGGATGGA ACGCAATTATTTCTGCCGCCGGTCGGAAGGCAATTTATTGTCGGAAGAAGTATGGCCGGGACTTTGCAATTTTCCGGATT TTACGGCTCCCGCCGTACGCGGCTGGTGGGCGGATCTGTTCAGCAGGGATATTGGGAAAATTGGCGTGCGCGGCCTCTGG AACGACATGAACGAACCTGTCGTTTTTCCGGACCGCACTTTCCCGATGGATACGCGGCATGAATATGACGGCATGCCCTG TTCCCATGAAAAGGCCCATAATATTTACGGGCAGTGCATGGCGGAAGCCTCCTGGCTGGGCATGAAGCGTCACGCTCCGG ACCGGCGCCCCTTCCTGCTGTCCCGATCCGGTTTTGCCGGATTGCAGCGCTTTGCCGCCACATGGACAGGGGACAACCGG TCCAGCTGGGAACATTTGAAGCTGGCCAATTTCCAGTGCCAGCGGCTTGCGGCTTCCGGCATTTCCTTTGCGGGAGCGGA TGCTGGGGGATTCATGGGGCATCCCACGCCGGAATTGTTTTGCCGCTGGATGCAAATGGCTTCTTTCCACGGTTTTTTCC GCAATCATTCCTCCGGGGAGTTCGGCGGTCAGGAGCCATGGGTTTTTGGGCAGGAAGTCACCTCTTACGTGAAAGCCGCC ATAGAGGGCCGCTACCGCCTGCTTCCCTATATCTACACGCAGTTCCGCCGGTACGCGGAGACGGGCATGCCCGTGCTGCG CTCCCTGGCCCTGCAATGTTTTACCAACAAGGACACCTACTGGCGGGGGGCGGAGTATTTCTTTGGAGACCATCTGTACG TCATTCCCATTCATGAGCCGCAGGAAGGCGGGAGGTTCCTCTACATTCCGGAGGGCGTCTGGTATTCCTACCACACGGAC AGCCTGATGGAGGACACAGGAAAGGATGTATGGGTGAAGTGCCCCCTTTCTTTCCTGCCCGTGTATGTCCGCGGAGGGGC GGTAATTCCCCATTGGCCGGTACAGCAATACGTGGGAGAACTGCCTCGGCCGCCGCTGACGCTGGATGTATGGTGGGCGC CGGAAGGGGAGGTGGCTTCCCATTTGTATGAAGATGCAGGGGACGGATATGCATACCGGAACGGAGAATGCGCCGTGCAT GGGTTCCTTTACCGCGGCGGCACCAATTCCCTGGAGCTGGATTGGAACTGCGAAGGGGATCCCTGTGCGTTCCATGAGTC CGCAGAGGTGGTTTTGCACGGTTTGCCTGCGGGTATTTCCGTCAGTGCATGCATGGACGGCGTGCCGTGCTGCGGCGTGA TGAGGGAAGGAAGGGTGTGGAAAATACCGGTGAAGGATAAATTTGACACGCTTTCCGTCTGCTGGCCGGAGGAATAA
Upstream 100 bases:
>100_bases AATGAAAAGAAAAGTGCTGCTTTAGTTCAATCTTGCGTTCGTCATGAAATTGATTTAGTCTGGACTGAACGCTTTTGATC CTCTCTTCCGTCCGGCTTCA
Downstream 100 bases:
>100_bases TGTTCTTCCATTAAGGGATGAGGCGTCCGGAGGAACTGTCATGGAAGGTGGAAACTGCGCCTGACCGTATCCCTCTTCAG TTTCAGTTCCCGCCATTCAT
Product: Alpha-glucosidase
Products: NA
Alternate protein names: Alpha-glucosidase II [H]
Number of amino acids: Translated: 798; Mature: 798
Protein sequence:
>798_residues MCSVSNIPERRKTPPLRGSLVKWEYTNTVSKITLSVCLADAGIVRVTYFPGAVPEDEPSYAVSPGYSAPGAEIREYDEDG FHVVETSLLRIRIRTEEQKVDFYDVATDEPLLTDEGGFGRESKDWTGDARVWIRKNLQETEHFFGLGDKPCALNLRGKYF SMWGADHYDFHEESDPLYKSIPFFLSLRERKAYGLLFDNTCRSYFDFGATDEKVLSFGSFGGLMNYYFIYDNTPLDIISA YTRLTGTPELPPLWALGYHQSKWSYYPDKAVYNLVERFRGLGIPCDAVHLDHHYMERKEGFTWDKQNFPDAEGMVRALEK DGVKTVLIVNPGVKVNSVNPVWKEGMERNYFCRRSEGNLLSEEVWPGLCNFPDFTAPAVRGWWADLFSRDIGKIGVRGLW NDMNEPVVFPDRTFPMDTRHEYDGMPCSHEKAHNIYGQCMAEASWLGMKRHAPDRRPFLLSRSGFAGLQRFAATWTGDNR SSWEHLKLANFQCQRLAASGISFAGADAGGFMGHPTPELFCRWMQMASFHGFFRNHSSGEFGGQEPWVFGQEVTSYVKAA IEGRYRLLPYIYTQFRRYAETGMPVLRSLALQCFTNKDTYWRGAEYFFGDHLYVIPIHEPQEGGRFLYIPEGVWYSYHTD SLMEDTGKDVWVKCPLSFLPVYVRGGAVIPHWPVQQYVGELPRPPLTLDVWWAPEGEVASHLYEDAGDGYAYRNGECAVH GFLYRGGTNSLELDWNCEGDPCAFHESAEVVLHGLPAGISVSACMDGVPCCGVMREGRVWKIPVKDKFDTLSVCWPEE
Sequences:
>Translated_798_residues MCSVSNIPERRKTPPLRGSLVKWEYTNTVSKITLSVCLADAGIVRVTYFPGAVPEDEPSYAVSPGYSAPGAEIREYDEDG FHVVETSLLRIRIRTEEQKVDFYDVATDEPLLTDEGGFGRESKDWTGDARVWIRKNLQETEHFFGLGDKPCALNLRGKYF SMWGADHYDFHEESDPLYKSIPFFLSLRERKAYGLLFDNTCRSYFDFGATDEKVLSFGSFGGLMNYYFIYDNTPLDIISA YTRLTGTPELPPLWALGYHQSKWSYYPDKAVYNLVERFRGLGIPCDAVHLDHHYMERKEGFTWDKQNFPDAEGMVRALEK DGVKTVLIVNPGVKVNSVNPVWKEGMERNYFCRRSEGNLLSEEVWPGLCNFPDFTAPAVRGWWADLFSRDIGKIGVRGLW NDMNEPVVFPDRTFPMDTRHEYDGMPCSHEKAHNIYGQCMAEASWLGMKRHAPDRRPFLLSRSGFAGLQRFAATWTGDNR SSWEHLKLANFQCQRLAASGISFAGADAGGFMGHPTPELFCRWMQMASFHGFFRNHSSGEFGGQEPWVFGQEVTSYVKAA IEGRYRLLPYIYTQFRRYAETGMPVLRSLALQCFTNKDTYWRGAEYFFGDHLYVIPIHEPQEGGRFLYIPEGVWYSYHTD SLMEDTGKDVWVKCPLSFLPVYVRGGAVIPHWPVQQYVGELPRPPLTLDVWWAPEGEVASHLYEDAGDGYAYRNGECAVH GFLYRGGTNSLELDWNCEGDPCAFHESAEVVLHGLPAGISVSACMDGVPCCGVMREGRVWKIPVKDKFDTLSVCWPEE >Mature_798_residues MCSVSNIPERRKTPPLRGSLVKWEYTNTVSKITLSVCLADAGIVRVTYFPGAVPEDEPSYAVSPGYSAPGAEIREYDEDG FHVVETSLLRIRIRTEEQKVDFYDVATDEPLLTDEGGFGRESKDWTGDARVWIRKNLQETEHFFGLGDKPCALNLRGKYF SMWGADHYDFHEESDPLYKSIPFFLSLRERKAYGLLFDNTCRSYFDFGATDEKVLSFGSFGGLMNYYFIYDNTPLDIISA YTRLTGTPELPPLWALGYHQSKWSYYPDKAVYNLVERFRGLGIPCDAVHLDHHYMERKEGFTWDKQNFPDAEGMVRALEK DGVKTVLIVNPGVKVNSVNPVWKEGMERNYFCRRSEGNLLSEEVWPGLCNFPDFTAPAVRGWWADLFSRDIGKIGVRGLW NDMNEPVVFPDRTFPMDTRHEYDGMPCSHEKAHNIYGQCMAEASWLGMKRHAPDRRPFLLSRSGFAGLQRFAATWTGDNR SSWEHLKLANFQCQRLAASGISFAGADAGGFMGHPTPELFCRWMQMASFHGFFRNHSSGEFGGQEPWVFGQEVTSYVKAA IEGRYRLLPYIYTQFRRYAETGMPVLRSLALQCFTNKDTYWRGAEYFFGDHLYVIPIHEPQEGGRFLYIPEGVWYSYHTD SLMEDTGKDVWVKCPLSFLPVYVRGGAVIPHWPVQQYVGELPRPPLTLDVWWAPEGEVASHLYEDAGDGYAYRNGECAVH GFLYRGGTNSLELDWNCEGDPCAFHESAEVVLHGLPAGISVSACMDGVPCCGVMREGRVWKIPVKDKFDTLSVCWPEE
Specific function: Unknown
COG id: COG1501
COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 31 family [H]
Homologues:
Organism=Homo sapiens, GI88900491, Length=638, Percent_Identity=33.0721003134796, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI38202257, Length=638, Percent_Identity=33.0721003134796, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI66346737, Length=629, Percent_Identity=32.7503974562798, Blast_Score=326, Evalue=6e-89, Organism=Homo sapiens, GI119393895, Length=642, Percent_Identity=28.816199376947, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI119393893, Length=642, Percent_Identity=28.816199376947, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI119393891, Length=642, Percent_Identity=28.816199376947, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI221316699, Length=565, Percent_Identity=29.2035398230088, Blast_Score=251, Evalue=3e-66, Organism=Homo sapiens, GI157364974, Length=614, Percent_Identity=28.0130293159609, Blast_Score=244, Evalue=3e-64, Organism=Homo sapiens, GI310115361, Length=526, Percent_Identity=25.0950570342205, Blast_Score=185, Evalue=2e-46, Organism=Escherichia coli, GI2367256, Length=544, Percent_Identity=28.4926470588235, Blast_Score=204, Evalue=2e-53, Organism=Escherichia coli, GI2367323, Length=577, Percent_Identity=22.5303292894281, Blast_Score=119, Evalue=7e-28, Organism=Caenorhabditis elegans, GI71991189, Length=769, Percent_Identity=30.4291287386216, Blast_Score=332, Evalue=4e-91, Organism=Caenorhabditis elegans, GI17560798, Length=671, Percent_Identity=31.4456035767511, Blast_Score=329, Evalue=4e-90, Organism=Caenorhabditis elegans, GI17560800, Length=671, Percent_Identity=31.4456035767511, Blast_Score=329, Evalue=4e-90, Organism=Caenorhabditis elegans, GI32563849, Length=608, Percent_Identity=26.6447368421053, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71985706, Length=604, Percent_Identity=25.1655629139073, Blast_Score=176, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6319706, Length=570, Percent_Identity=29.4736842105263, Blast_Score=261, Evalue=3e-70, Organism=Drosophila melanogaster, GI24643749, Length=590, Percent_Identity=32.2033898305085, Blast_Score=311, Evalue=2e-84, Organism=Drosophila melanogaster, GI24643753, Length=590, Percent_Identity=32.2033898305085, Blast_Score=311, Evalue=2e-84, Organism=Drosophila melanogaster, GI24643751, Length=590, Percent_Identity=32.2033898305085, Blast_Score=311, Evalue=2e-84, Organism=Drosophila melanogaster, GI24643746, Length=590, Percent_Identity=32.2033898305085, Blast_Score=311, Evalue=2e-84, Organism=Drosophila melanogaster, GI21357605, Length=590, Percent_Identity=32.2033898305085, Blast_Score=311, Evalue=2e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011013 - InterPro: IPR000322 - InterPro: IPR017853 [H]
Pfam domain/function: PF01055 Glyco_hydro_31 [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 90914; Mature: 90914
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00129 GLYCOSYL_HYDROL_F31_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSVSNIPERRKTPPLRGSLVKWEYTNTVSKITLSVCLADAGIVRVTYFPGAVPEDEPSY CCCCCCCCHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCE AVSPGYSAPGAEIREYDEDGFHVVETSLLRIRIRTEEQKVDFYDVATDEPLLTDEGGFGR EECCCCCCCCCHHHHCCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCEEECCCCCCC ESKDWTGDARVWIRKNLQETEHFFGLGDKPCALNLRGKYFSMWGADHYDFHEESDPLYKS CCCCCCCCEEEEEHHCHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCHHHH IPFFLSLRERKAYGLLFDNTCRSYFDFGATDEKVLSFGSFGGLMNYYFIYDNTPLDIISA CCHHEEECCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHH YTRLTGTPELPPLWALGYHQSKWSYYPDKAVYNLVERFRGLGIPCDAVHLDHHYMERKEG HHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCC FTWDKQNFPDAEGMVRALEKDGVKTVLIVNPGVKVNSVNPVWKEGMERNYFCRRSEGNLL CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEECCCCHHHHHCCCCCCEEECCCCCCC SEEVWPGLCNFPDFTAPAVRGWWADLFSRDIGKIGVRGLWNDMNEPVVFPDRTFPMDTRH HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCCCCCCCCC EYDGMPCSHEKAHNIYGQCMAEASWLGMKRHAPDRRPFLLSRSGFAGLQRFAATWTGDNR CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEECCCHHHHHHHHHEECCCCC SSWEHLKLANFQCQRLAASGISFAGADAGGFMGHPTPELFCRWMQMASFHGFFRNHSSGE CCCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC FGGQEPWVFGQEVTSYVKAAIEGRYRLLPYIYTQFRRYAETGMPVLRSLALQCFTNKDTY CCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC WRGAEYFFGDHLYVIPIHEPQEGGRFLYIPEGVWYSYHTDSLMEDTGKDVWVKCPLSFLP CCCCCEEECCEEEEEEECCCCCCCEEEEECCCCEEEECCCHHHHHCCCCEEEECCHHHCC VYVRGGAVIPHWPVQQYVGELPRPPLTLDVWWAPEGEVASHLYEDAGDGYAYRNGECAVH EEEECCEECCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECCCEEEE GFLYRGGTNSLELDWNCEGDPCAFHESAEVVLHGLPAGISVSACMDGVPCCGVMREGRVW EEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEE KIPVKDKFDTLSVCWPEE EECCCCCCCEEEEECCCC >Mature Secondary Structure MCSVSNIPERRKTPPLRGSLVKWEYTNTVSKITLSVCLADAGIVRVTYFPGAVPEDEPSY CCCCCCCCHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCE AVSPGYSAPGAEIREYDEDGFHVVETSLLRIRIRTEEQKVDFYDVATDEPLLTDEGGFGR EECCCCCCCCCHHHHCCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCEEECCCCCCC ESKDWTGDARVWIRKNLQETEHFFGLGDKPCALNLRGKYFSMWGADHYDFHEESDPLYKS CCCCCCCCEEEEEHHCHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCHHHH IPFFLSLRERKAYGLLFDNTCRSYFDFGATDEKVLSFGSFGGLMNYYFIYDNTPLDIISA CCHHEEECCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHH YTRLTGTPELPPLWALGYHQSKWSYYPDKAVYNLVERFRGLGIPCDAVHLDHHYMERKEG HHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCC FTWDKQNFPDAEGMVRALEKDGVKTVLIVNPGVKVNSVNPVWKEGMERNYFCRRSEGNLL CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEECCCCHHHHHCCCCCCEEECCCCCCC SEEVWPGLCNFPDFTAPAVRGWWADLFSRDIGKIGVRGLWNDMNEPVVFPDRTFPMDTRH HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCCCCCCCCC EYDGMPCSHEKAHNIYGQCMAEASWLGMKRHAPDRRPFLLSRSGFAGLQRFAATWTGDNR CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEECCCHHHHHHHHHEECCCCC SSWEHLKLANFQCQRLAASGISFAGADAGGFMGHPTPELFCRWMQMASFHGFFRNHSSGE CCCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC FGGQEPWVFGQEVTSYVKAAIEGRYRLLPYIYTQFRRYAETGMPVLRSLALQCFTNKDTY CCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC WRGAEYFFGDHLYVIPIHEPQEGGRFLYIPEGVWYSYHTDSLMEDTGKDVWVKCPLSFLP CCCCCEEECCEEEEEEECCCCCCCEEEEECCCCEEEECCCHHHHHCCCCEEEECCHHHCC VYVRGGAVIPHWPVQQYVGELPRPPLTLDVWWAPEGEVASHLYEDAGDGYAYRNGECAVH EEEECCEECCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECCCEEEE GFLYRGGTNSLELDWNCEGDPCAFHESAEVVLHGLPAGISVSACMDGVPCCGVMREGRVW EEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEE KIPVKDKFDTLSVCWPEE EECCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10945254 [H]