Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736341
Identifier: 187736341
GI number: 187736341
Start: 2259751
End: 2261733
Strand: Reverse
Name: 187736341
Synonym: Amuc_1858
Alternate gene names: NA
Gene position: 2261733-2259751 (Counterclockwise)
Preceding gene: 187736342
Following gene: 187736340
Centisome position: 84.9
GC content: 36.96
Gene sequence:
>1983_bases ATGATACAAAGGTCTTATTATTTCAATGACCTACAGTCTTTTTGTACCCAAACTCTAGAAGAAATTTTAGGGCAGATTGC TCTTCATACCCCATTTTCTTTAGATCAAAATTCACGTAATTCTTTTGTTCACGAAATTAGATTACTCCAAAGTGTTCTTA AAAGTATTCCCTCTGGATCCATAGCCCTTGAATACACTATTCCTCGCATCGGAGAGCGAATAGATGTCGTAATCGCTTGT GCTGGTATTCTCTATATTCTTGAATTTAAAGTAGGAGAATCATCTTATCCAAGACATGCTATTGATCAAGTGGTAGATTA TGCACTAGCATTAAAATATTTCCATCAAGAAAGTTATCAAAAGAAAATTGTTCCTCTGGTAGTCTGCACTCATGCTCCTT CTAAAGAGTTTCAACTTATAATGAACCCAGATGGGGTTTATCTTCCTATCCTTTGCAATGATAATACCTTAGGTCCTAAT TTAACAAAACTTACTAACAATCTGTGTGATGACGAATTCCATTTTAAACAATGGTTAATTTCGCCATACATGCCTACTCC CACGATCATTGAAGCAGCTCAAGCACTCTACCGTGGACATGGAGTCAAAGAAATTTCACGGAGTAGTGCCGGAGCCTACA ATCTTAGTCTCACAACAAAGGTACTAAATCGTATTATTGAACAAAGTAAACAGTATCATCAAAAATCTATTTGTTTTGTT ACTGGCGTACCTGGTGCCGGAAAAACGCTAGTAGGCCTCAATATTGCAAATGAGCGACATCAATATGATAAACAAGAACA TGCAGTTTTTCTTTCCGGTAATGGTCCCTTGGTTGCTGTCCTGCGAGAAGCTCTAGTACGAGATGAAATTAAACGCTGTA AAGGCAAAATAACAAAAATAACATCTAAAAGAAAAGTTGCTGCCTTTATTCAAAATATCCATCATTTTCGTGATACTTAT CTACCTCCTTCCGAACAAGTTCCTGCGGAAAAAGTAACTATTTTTGACGAAGCACAACGTGCTTGGACAAAAGAGCAAAC GGCTAAATTTATGTTAAAACGCCATGTTCCCTCCTGGAACATGTCTGAACCAGAATTCCTCATTAGTGTAATGGATCGCC ATCAAGATTGGGCTGTAATCATTTGTCTAATTGGAGGTGGTCAAGAAATACATACTGGAGAAGCTGGCCTTTTAGCTTGG TTTGATGCACTAAGAAACCATTTCCCTCATTGGAATGTTTATGTGTCCCCCCAAATCTCTGATGTAGAATATACGCAAGG AAAAACACTTGAATCTCTCTTTATGGGATTACATCTTTATCAGGAAAAAAAACTTCATCTTTCTGTCTCACTTCGTTCTT TTCGGAATGAAAAAGTTTCAGCATTTGTAAAATCTCTATTGGATGAAAACTTACCAATAGCTCAACAACTCTATTCAGAA CTCTCACTTAATTATCCTATTGTCATTACACGTAGCCTAGAAAAAGCTAAACAATGGGTACAAAATCAATCCCGAGGTAC AGAACGTTATGGACTCATTTCTAGTTCAGGAGCCAAACGTCTACGCCAATTTGGTATTTGGGTACAGAACGATATTCAGG CAGAAAATTGGTTTTTAAACGATAAAGAGGATGTACGCTCTTCCTATTTTCTAGAAGAAACAGCAACTGAATTTGATATT CAGGGTCTTGAAATTGATTGGGCAATCGTTGCATGGGATGCAGACTTTCGTATAGAAAAAGGACATTTTAAAGCTTATAA TTTTAAGGGGTCTAGTTGGAAAATAGTTCGTAAGAAAGATGCACAACTCTATCTCAAAAATACTTACCGTGTTTTATTAA CACGAGCACGCCAAGGGTTCGTTATTTTTATTCCAAAAGGATGTGACGAGGATTTGACTCGTCACTCCTCCTTCTATGAT GGTATTTATTATTACCTAAAAGAAATAGGTATCAAGGAGCTATGCCTTTCTGAAGAACAATAG
Upstream 100 bases:
>100_bases GCAAGCCGGAGCCTTCGTGCCGGAATGGGAACTTCTGGACAAAGCCATCCGCAAGCGCCTGAACATGAATAGTCCTTCTG ATTCTATTTAATAAACTAAA
Downstream 100 bases:
>100_bases CTTTCTCAACTTTTGTGAAACTATGCTGAAGACCATCGTCATTTTCATCATTGCCCTTCTGGGCTTCGGCATGATTCGCC TGCCTTTGCAGAATCATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MIQRSYYFNDLQSFCTQTLEEILGQIALHTPFSLDQNSRNSFVHEIRLLQSVLKSIPSGSIALEYTIPRIGERIDVVIAC AGILYILEFKVGESSYPRHAIDQVVDYALALKYFHQESYQKKIVPLVVCTHAPSKEFQLIMNPDGVYLPILCNDNTLGPN LTKLTNNLCDDEFHFKQWLISPYMPTPTIIEAAQALYRGHGVKEISRSSAGAYNLSLTTKVLNRIIEQSKQYHQKSICFV TGVPGAGKTLVGLNIANERHQYDKQEHAVFLSGNGPLVAVLREALVRDEIKRCKGKITKITSKRKVAAFIQNIHHFRDTY LPPSEQVPAEKVTIFDEAQRAWTKEQTAKFMLKRHVPSWNMSEPEFLISVMDRHQDWAVIICLIGGGQEIHTGEAGLLAW FDALRNHFPHWNVYVSPQISDVEYTQGKTLESLFMGLHLYQEKKLHLSVSLRSFRNEKVSAFVKSLLDENLPIAQQLYSE LSLNYPIVITRSLEKAKQWVQNQSRGTERYGLISSSGAKRLRQFGIWVQNDIQAENWFLNDKEDVRSSYFLEETATEFDI QGLEIDWAIVAWDADFRIEKGHFKAYNFKGSSWKIVRKKDAQLYLKNTYRVLLTRARQGFVIFIPKGCDEDLTRHSSFYD GIYYYLKEIGIKELCLSEEQ
Sequences:
>Translated_660_residues MIQRSYYFNDLQSFCTQTLEEILGQIALHTPFSLDQNSRNSFVHEIRLLQSVLKSIPSGSIALEYTIPRIGERIDVVIAC AGILYILEFKVGESSYPRHAIDQVVDYALALKYFHQESYQKKIVPLVVCTHAPSKEFQLIMNPDGVYLPILCNDNTLGPN LTKLTNNLCDDEFHFKQWLISPYMPTPTIIEAAQALYRGHGVKEISRSSAGAYNLSLTTKVLNRIIEQSKQYHQKSICFV TGVPGAGKTLVGLNIANERHQYDKQEHAVFLSGNGPLVAVLREALVRDEIKRCKGKITKITSKRKVAAFIQNIHHFRDTY LPPSEQVPAEKVTIFDEAQRAWTKEQTAKFMLKRHVPSWNMSEPEFLISVMDRHQDWAVIICLIGGGQEIHTGEAGLLAW FDALRNHFPHWNVYVSPQISDVEYTQGKTLESLFMGLHLYQEKKLHLSVSLRSFRNEKVSAFVKSLLDENLPIAQQLYSE LSLNYPIVITRSLEKAKQWVQNQSRGTERYGLISSSGAKRLRQFGIWVQNDIQAENWFLNDKEDVRSSYFLEETATEFDI QGLEIDWAIVAWDADFRIEKGHFKAYNFKGSSWKIVRKKDAQLYLKNTYRVLLTRARQGFVIFIPKGCDEDLTRHSSFYD GIYYYLKEIGIKELCLSEEQ >Mature_660_residues MIQRSYYFNDLQSFCTQTLEEILGQIALHTPFSLDQNSRNSFVHEIRLLQSVLKSIPSGSIALEYTIPRIGERIDVVIAC AGILYILEFKVGESSYPRHAIDQVVDYALALKYFHQESYQKKIVPLVVCTHAPSKEFQLIMNPDGVYLPILCNDNTLGPN LTKLTNNLCDDEFHFKQWLISPYMPTPTIIEAAQALYRGHGVKEISRSSAGAYNLSLTTKVLNRIIEQSKQYHQKSICFV TGVPGAGKTLVGLNIANERHQYDKQEHAVFLSGNGPLVAVLREALVRDEIKRCKGKITKITSKRKVAAFIQNIHHFRDTY LPPSEQVPAEKVTIFDEAQRAWTKEQTAKFMLKRHVPSWNMSEPEFLISVMDRHQDWAVIICLIGGGQEIHTGEAGLLAW FDALRNHFPHWNVYVSPQISDVEYTQGKTLESLFMGLHLYQEKKLHLSVSLRSFRNEKVSAFVKSLLDENLPIAQQLYSE LSLNYPIVITRSLEKAKQWVQNQSRGTERYGLISSSGAKRLRQFGIWVQNDIQAENWFLNDKEDVRSSYFLEETATEFDI QGLEIDWAIVAWDADFRIEKGHFKAYNFKGSSWKIVRKKDAQLYLKNTYRVLLTRARQGFVIFIPKGCDEDLTRHSSFYD GIYYYLKEIGIKELCLSEEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75843; Mature: 75843
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQRSYYFNDLQSFCTQTLEEILGQIALHTPFSLDQNSRNSFVHEIRLLQSVLKSIPSGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC IALEYTIPRIGERIDVVIACAGILYILEFKVGESSYPRHAIDQVVDYALALKYFHQESYQ EEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KKIVPLVVCTHAPSKEFQLIMNPDGVYLPILCNDNTLGPNLTKLTNNLCDDEFHFKQWLI CCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHC SPYMPTPTIIEAAQALYRGHGVKEISRSSAGAYNLSLTTKVLNRIIEQSKQYHQKSICFV CCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEE TGVPGAGKTLVGLNIANERHQYDKQEHAVFLSGNGPLVAVLREALVRDEIKRCKGKITKI ECCCCCCCEEEEEEECCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCHHHHH TSKRKVAAFIQNIHHFRDTYLPPSEQVPAEKVTIFDEAQRAWTKEQTAKFMLKRHVPSWN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCC MSEPEFLISVMDRHQDWAVIICLIGGGQEIHTGEAGLLAWFDALRNHFPHWNVYVSPQIS CCCHHHHHHHHHCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHHCCCCCEEEECCCCC DVEYTQGKTLESLFMGLHLYQEKKLHLSVSLRSFRNEKVSAFVKSLLDENLPIAQQLYSE CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH LSLNYPIVITRSLEKAKQWVQNQSRGTERYGLISSSGAKRLRQFGIWVQNDIQAENWFLN HCCCCCEEEECCHHHHHHHHHHHCCCCHHCCEECCHHHHHHHHHCCEEECCCCCCCCCCC DKEDVRSSYFLEETATEFDIQGLEIDWAIVAWDADFRIEKGHFKAYNFKGSSWKIVRKKD CHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEECCCEEEEECCCCCEEEEEECC AQLYLKNTYRVLLTRARQGFVIFIPKGCDEDLTRHSSFYDGIYYYLKEIGIKELCLSEEQ CEEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC >Mature Secondary Structure MIQRSYYFNDLQSFCTQTLEEILGQIALHTPFSLDQNSRNSFVHEIRLLQSVLKSIPSGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC IALEYTIPRIGERIDVVIACAGILYILEFKVGESSYPRHAIDQVVDYALALKYFHQESYQ EEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KKIVPLVVCTHAPSKEFQLIMNPDGVYLPILCNDNTLGPNLTKLTNNLCDDEFHFKQWLI CCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHC SPYMPTPTIIEAAQALYRGHGVKEISRSSAGAYNLSLTTKVLNRIIEQSKQYHQKSICFV CCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEE TGVPGAGKTLVGLNIANERHQYDKQEHAVFLSGNGPLVAVLREALVRDEIKRCKGKITKI ECCCCCCCEEEEEEECCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCHHHHH TSKRKVAAFIQNIHHFRDTYLPPSEQVPAEKVTIFDEAQRAWTKEQTAKFMLKRHVPSWN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCC MSEPEFLISVMDRHQDWAVIICLIGGGQEIHTGEAGLLAWFDALRNHFPHWNVYVSPQIS CCCHHHHHHHHHCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHHCCCCCEEEECCCCC DVEYTQGKTLESLFMGLHLYQEKKLHLSVSLRSFRNEKVSAFVKSLLDENLPIAQQLYSE CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH LSLNYPIVITRSLEKAKQWVQNQSRGTERYGLISSSGAKRLRQFGIWVQNDIQAENWFLN HCCCCCEEEECCHHHHHHHHHHHCCCCHHCCEECCHHHHHHHHHCCEEECCCCCCCCCCC DKEDVRSSYFLEETATEFDIQGLEIDWAIVAWDADFRIEKGHFKAYNFKGSSWKIVRKKD CHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEECCCEEEEECCCCCEEEEEECC AQLYLKNTYRVLLTRARQGFVIFIPKGCDEDLTRHSSFYDGIYYYLKEIGIKELCLSEEQ CEEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA